RNA–Protein interactions for RNA: ENST00000371941.3

PREX1-201, Transcript of phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PREX1, Length 6,636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREX1-201ENST00000371941 CHD1LQ86WJ1 897 aa16.37■□□□□ 0.21
PREX1-201ENST00000371941 RUFY2Q8WXA3 655 aa16.37■□□□□ 0.21
PREX1-201ENST00000371941 HMGXB3Q12766 1538 aa16.37■□□□□ 0.21
PREX1-201ENST00000371941 FAM43AQ8N2R8 423 aa16.37■□□□□ 0.21
PREX1-201ENST00000371941 SPC24Q8NBT2 197 aa16.36■□□□□ 0.21
PREX1-201ENST00000371941 FIBPO43427 364 aa16.36■□□□□ 0.21
PREX1-201ENST00000371941 IGHDP01880 384 aa16.36■□□□□ 0.21
PREX1-201ENST00000371941 TMPOP42166 694 aaKnown RBP16.36■□□□□ 0.21
PREX1-201ENST00000371941 ROCK1Q13464 1354 aa16.36■□□□□ 0.21
PREX1-201ENST00000371941 WASHC4Q2M389 1173 aa16.36■□□□□ 0.21
PREX1-201ENST00000371941 USHBP1Q8N6Y0 703 aa16.35■□□□□ 0.21
PREX1-201ENST00000371941 TPD52L1Q16890 204 aaPredicted RBP16.35■□□□□ 0.21
PREX1-201ENST00000371941 CHMP4CQ96CF2 233 aa16.35■□□□□ 0.21
PREX1-201ENST00000371941 FSD1Q9BTV5 496 aa16.35■□□□□ 0.21
PREX1-201ENST00000371941 NFXL1Q6ZNB6 911 aa16.35■□□□□ 0.21
PREX1-201ENST00000371941 HDAC5Q9UQL6 1122 aa16.35■□□□□ 0.21
PREX1-201ENST00000371941 NCOA1Q15788 1441 aa16.34■□□□□ 0.21
PREX1-201ENST00000371941 G3V3G9 751 aa16.34■□□□□ 0.21
PREX1-201ENST00000371941 NUCB2P80303 420 aa16.34■□□□□ 0.21
PREX1-201ENST00000371941 DCAF8Q5TAQ9 597 aa16.34■□□□□ 0.21
PREX1-201ENST00000371941 EXOC6BQ9Y2D4 811 aa16.34■□□□□ 0.21
PREX1-201ENST00000371941 SSH1Q8WYL5 1049 aa16.33■□□□□ 0.21
PREX1-201ENST00000371941 TNNQ9UQP3 1299 aa16.33■□□□□ 0.21
PREX1-201ENST00000371941 SPINK5Q9NQ38 1064 aaPredicted RBP16.33■□□□□ 0.2
PREX1-201ENST00000371941 CPLX1O14810 134 aa16.33■□□□□ 0.2
PREX1-201ENST00000371941 NUTM1Q86Y26 1132 aa16.33■□□□□ 0.2
PREX1-201ENST00000371941 DDX58O95786 925 aaKnown RBP16.32■□□□□ 0.2
PREX1-201ENST00000371941 NOC3LQ8WTT2 800 aaKnown RBP16.32■□□□□ 0.2
PREX1-201ENST00000371941 RAPGEF4Q8WZA2 1011 aa16.32■□□□□ 0.2
PREX1-201ENST00000371941 ATP6V1DQ9Y5K8 247 aa16.32■□□□□ 0.2
PREX1-201ENST00000371941 IFT140Q96RY7 1462 aa16.32■□□□□ 0.2
PREX1-201ENST00000371941 F6X3S4 739 aa16.32■□□□□ 0.2
PREX1-201ENST00000371941 ABCA10Q8WWZ4 1543 aa16.32■□□□□ 0.2
PREX1-201ENST00000371941 CCDC30Q5VVM6 783 aa16.32■□□□□ 0.2
PREX1-201ENST00000371941 GPRASP1Q5JY77 1395 aa16.32■□□□□ 0.2
PREX1-201ENST00000371941 RARSP54136 660 aaKnown RBP16.31■□□□□ 0.2
PREX1-201ENST00000371941 TSHZ3Q63HK5 1081 aa16.31■□□□□ 0.2
PREX1-201ENST00000371941 CCDC85AQ96PX6 553 aaPredicted RBP16.31■□□□□ 0.2
PREX1-201ENST00000371941 GNAI2P04899 355 aa16.31■□□□□ 0.2
PREX1-201ENST00000371941 HDGFL1Q5TGJ6 251 aa16.31■□□□□ 0.2
PREX1-201ENST00000371941 IFT57Q9NWB7 429 aa16.31■□□□□ 0.2
PREX1-201ENST00000371941 SAMD1Q6SPF0 538 aaPredicted RBP16.31■□□□□ 0.2
PREX1-201ENST00000371941 NME9Q86XW9 330 aa16.31■□□□□ 0.2
PREX1-201ENST00000371941 MARCH6O60337 910 aa16.31■□□□□ 0.2
PREX1-201ENST00000371941 ATP2B1P20020 1258 aa16.31■□□□□ 0.2
PREX1-201ENST00000371941 DUSP27Q5VZP5 1158 aa16.31■□□□□ 0.2
PREX1-201ENST00000371941 CNTROBQ8N137 903 aa16.31■□□□□ 0.2
PREX1-201ENST00000371941 CHMP4AQ9BY43 222 aa16.31■□□□□ 0.2
PREX1-201ENST00000371941 ZNF608Q9ULD9 1512 aaPredicted RBP16.31■□□□□ 0.2
PREX1-201ENST00000371941 FBXO31Q5XUX0 539 aaPredicted RBP16.3■□□□□ 0.2
PREX1-201ENST00000371941 WDR63Q8IWG1 891 aa16.3■□□□□ 0.2
PREX1-201ENST00000371941 FMNL2Q96PY5 1086 aa16.3■□□□□ 0.2
PREX1-201ENST00000371941 STRN4Q9NRL3 753 aa16.3■□□□□ 0.2
PREX1-201ENST00000371941 EMILIN1Q9Y6C2 1016 aa16.3■□□□□ 0.2
PREX1-201ENST00000371941 MAGI1Q96QZ7 1491 aaPredicted RBP16.3■□□□□ 0.2
PREX1-201ENST00000371941 CWC27Q6UX04 472 aaKnown RBP16.3■□□□□ 0.2
PREX1-201ENST00000371941 MRE11P49959 708 aa16.3■□□□□ 0.2
PREX1-201ENST00000371941 FAM83GA6ND36 823 aa16.3■□□□□ 0.2
PREX1-201ENST00000371941 SASS6Q6UVJ0 657 aa16.3■□□□□ 0.2
PREX1-201ENST00000371941 AKAP17AQ02040 695 aaKnown RBP16.29■□□□□ 0.2
PREX1-201ENST00000371941 BIVM-ERCC5R4GMW8 1640 aa16.28■□□□□ 0.2
PREX1-201ENST00000371941 K7ELQ4 463 aaPredicted RBP16.28■□□□□ 0.2
PREX1-201ENST00000371941 ERC2O15083 957 aa16.28■□□□□ 0.2
PREX1-201ENST00000371941 RTEL1-TNFRSF6BF6WH68 1400 aa16.28■□□□□ 0.2
PREX1-201ENST00000371941 URB2Q14146 1524 aaKnown RBP16.28■□□□□ 0.2
PREX1-201ENST00000371941 CUL7Q14999 1698 aa16.28■□□□□ 0.2
PREX1-201ENST00000371941 VPS37DQ86XT2 251 aa16.27■□□□□ 0.2
PREX1-201ENST00000371941 RNF20Q5VTR2 975 aa16.27■□□□□ 0.2
PREX1-201ENST00000371941 HOMER1Q86YM7 354 aa16.27■□□□□ 0.2
PREX1-201ENST00000371941 TTLL5Q6EMB2 1281 aa16.27■□□□□ 0.19
PREX1-201ENST00000371941 CLASRPQ8N2M8 674 aaKnown RBP16.27■□□□□ 0.19
PREX1-201ENST00000371941 GCC1Q96CN9 775 aa16.27■□□□□ 0.19
PREX1-201ENST00000371941 KIF3AQ9Y496 699 aa16.27■□□□□ 0.19
PREX1-201ENST00000371941 SYNE3Q6ZMZ3 975 aa16.26■□□□□ 0.19
PREX1-201ENST00000371941 LRRCC1Q9C099 1032 aa16.26■□□□□ 0.19
PREX1-201ENST00000371941 TRIM29Q14134 588 aa16.26■□□□□ 0.19
PREX1-201ENST00000371941 PLEKHH2Q8IVE3 1493 aa16.26■□□□□ 0.19
PREX1-201ENST00000371941 RBM42Q9BTD8 480 aaKnown RBP16.26■□□□□ 0.19
PREX1-201ENST00000371941 RRP12Q5JTH9 1297 aaKnown RBP16.25■□□□□ 0.19
PREX1-201ENST00000371941 GRPEL1Q9HAV7 217 aa16.25■□□□□ 0.19
PREX1-201ENST00000371941 CCDC141Q6ZP82 1450 aa16.25■□□□□ 0.19
PREX1-201ENST00000371941 KIF14Q15058 1648 aa16.25■□□□□ 0.19
PREX1-201ENST00000371941 RPRD2Q5VT52 1461 aaKnown RBP16.25■□□□□ 0.19
PREX1-201ENST00000371941 PCMTD1Q96MG8 357 aaPredicted RBP16.25■□□□□ 0.19
PREX1-201ENST00000371941 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.25■□□□□ 0.19
PREX1-201ENST00000371941 MCM4P33991 863 aa16.24■□□□□ 0.19
PREX1-201ENST00000371941 ZNF771Q7L3S4 317 aaPredicted RBP16.24■□□□□ 0.19
PREX1-201ENST00000371941 DHX16O60231 1041 aaKnown RBP16.24■□□□□ 0.19
PREX1-201ENST00000371941 ATF3P18847 181 aa16.24■□□□□ 0.19
PREX1-201ENST00000371941 SRGAP3O43295 1099 aa16.24■□□□□ 0.19
PREX1-201ENST00000371941 NUDT16Q96DE0 195 aaKnown RBP16.24■□□□□ 0.19
PREX1-201ENST00000371941 UPF3BQ9BZI7 483 aaKnown RBP16.24■□□□□ 0.19
PREX1-201ENST00000371941 TRDNQ13061 729 aa16.24■□□□□ 0.19
PREX1-201ENST00000371941 NKTRP30414 1462 aaKnown RBP16.23■□□□□ 0.19
PREX1-201ENST00000371941 GAS2L2Q8NHY3 880 aa16.23■□□□□ 0.19
PREX1-201ENST00000371941 TRIM27P14373 513 aa16.23■□□□□ 0.19
PREX1-201ENST00000371941 KIAA0586Q9BVV6 1533 aa16.23■□□□□ 0.19
PREX1-201ENST00000371941 GNAI3P08754 354 aa16.23■□□□□ 0.19
PREX1-201ENST00000371941 PDILTQ8N807 584 aa16.23■□□□□ 0.19
PREX1-201ENST00000371941 TSPY26PQ9H489 355 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms