RNA–Protein interactions for RNA: ENST00000370952.3

LRRC40-201, Transcript of leucine rich repeat containing 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC40, Length 2,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40-201ENST00000370952 PTMSP20962 102 aa12.02□□□□□ -0.49
LRRC40-201ENST00000370952 KLHL40Q2TBA0 621 aa12.02□□□□□ -0.49
LRRC40-201ENST00000370952 ANKRD45Q5TZF3 282 aa12.02□□□□□ -0.49
LRRC40-201ENST00000370952 C1orf115Q9H7X2 142 aa12.02□□□□□ -0.49
LRRC40-201ENST00000370952 UGGT1Q9NYU2 1555 aa12.02□□□□□ -0.49
LRRC40-201ENST00000370952 U2SURPO15042 1029 aaKnown RBP12.01□□□□□ -0.49
LRRC40-201ENST00000370952 TBC1D9Q6ZT07 1266 aa12.01□□□□□ -0.49
LRRC40-201ENST00000370952 CALD1Q05682 793 aaKnown RBP12□□□□□ -0.49
LRRC40-201ENST00000370952 STAC3Q96MF2 364 aa12□□□□□ -0.49
LRRC40-201ENST00000370952 RBSNQ9H1K0 784 aa12□□□□□ -0.49
LRRC40-201ENST00000370952 KIAA1210Q9ULL0 1709 aa12□□□□□ -0.49
LRRC40-201ENST00000370952 BMP2KLQ5H9B9 411 aa12□□□□□ -0.49
LRRC40-201ENST00000370952 TRAPPC8Q9Y2L5 1435 aa12□□□□□ -0.49
LRRC40-201ENST00000370952 UQCRHLA0A096LP55 91 aa11.99□□□□□ -0.49
LRRC40-201ENST00000370952 UQCRHP07919 91 aa11.99□□□□□ -0.49
LRRC40-201ENST00000370952 PKP1Q13835 747 aa11.99□□□□□ -0.49
LRRC40-201ENST00000370952 PRDM4Q9UKN5 801 aa11.99□□□□□ -0.49
LRRC40-201ENST00000370952 MAP3K4Q9Y6R4 1608 aa11.99□□□□□ -0.49
LRRC40-201ENST00000370952 SLC24A1O60721 1099 aa11.99□□□□□ -0.49
LRRC40-201ENST00000370952 ZSCAN23Q3MJ62 389 aa11.99□□□□□ -0.49
LRRC40-201ENST00000370952 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.99□□□□□ -0.49
LRRC40-201ENST00000370952 RBM27Q9P2N5 1060 aaKnown RBP11.99□□□□□ -0.49
LRRC40-201ENST00000370952 TRIM35Q9UPQ4 493 aa11.99□□□□□ -0.49
LRRC40-201ENST00000370952 CD109Q6YHK3 1445 aa11.98□□□□□ -0.49
LRRC40-201ENST00000370952 ZBTB7CA1YPR0 619 aa11.98□□□□□ -0.49
LRRC40-201ENST00000370952 TMPOP42166 694 aaKnown RBP11.98□□□□□ -0.49
LRRC40-201ENST00000370952 AFAP1Q8N556 730 aa11.98□□□□□ -0.49
LRRC40-201ENST00000370952 CHAMP1Q96JM3 812 aa11.98□□□□□ -0.49
LRRC40-201ENST00000370952 CFAP74Q9C0B2 1584 aa11.98□□□□□ -0.49
LRRC40-201ENST00000370952 CT47B1P0C2W7 299 aaPredicted RBP11.97□□□□□ -0.49
LRRC40-201ENST00000370952 CHGAP10645 457 aaKnown RBP11.97□□□□□ -0.49
LRRC40-201ENST00000370952 PRIM1P49642 420 aaKnown RBP11.97□□□□□ -0.49
LRRC40-201ENST00000370952 TMEM132EQ6IEE7 984 aa11.97□□□□□ -0.49
LRRC40-201ENST00000370952 IBTKQ9P2D0 1353 aaPredicted RBP11.97□□□□□ -0.49
LRRC40-201ENST00000370952 ZNF445P59923 1031 aa11.97□□□□□ -0.49
LRRC40-201ENST00000370952 LMBRD1Q9NUN5 540 aa11.97□□□□□ -0.49
LRRC40-201ENST00000370952 NOL7Q9UMY1 257 aaKnown RBP11.97□□□□□ -0.49
LRRC40-201ENST00000370952 SPAG9O60271 1321 aaKnown RBP11.96□□□□□ -0.49
LRRC40-201ENST00000370952 NOS1P29475 1434 aa11.96□□□□□ -0.49
LRRC40-201ENST00000370952 ADGRB2O60241 1585 aa11.96□□□□□ -0.5
LRRC40-201ENST00000370952 PRPF40AO75400 957 aaKnown RBP11.95□□□□□ -0.5
LRRC40-201ENST00000370952 PRDM10Q9NQV6 1147 aa11.95□□□□□ -0.5
LRRC40-201ENST00000370952 PPIP5K1Q6PFW1 1433 aa11.95□□□□□ -0.5
LRRC40-201ENST00000370952 IPO8O15397 1037 aaKnown RBP11.95□□□□□ -0.5
LRRC40-201ENST00000370952 TERF1P54274 439 aa11.95□□□□□ -0.5
LRRC40-201ENST00000370952 EFCAB2Q5VUJ9 269 aa11.95□□□□□ -0.5
LRRC40-201ENST00000370952 CLEC17AQ6ZS10 378 aa11.95□□□□□ -0.5
LRRC40-201ENST00000370952 KIF16BQ96L93 1317 aa11.94□□□□□ -0.5
LRRC40-201ENST00000370952 ZNF500O60304 480 aaPredicted RBP11.94□□□□□ -0.5
LRRC40-201ENST00000370952 KIF3BO15066 747 aa11.94□□□□□ -0.5
LRRC40-201ENST00000370952 FOXD4L5Q5VV16 416 aaPredicted RBP11.94□□□□□ -0.5
LRRC40-201ENST00000370952 FOXD4L4Q8WXT5 416 aaPredicted RBP11.94□□□□□ -0.5
LRRC40-201ENST00000370952 PDLIM2Q96JY6 352 aa11.94□□□□□ -0.5
LRRC40-201ENST00000370952 PLEKHF1Q96S99 279 aa11.94□□□□□ -0.5
LRRC40-201ENST00000370952 GPT2Q8TD30 523 aa11.93□□□□□ -0.5
LRRC40-201ENST00000370952 ZKSCAN5Q9Y2L8 839 aa11.93□□□□□ -0.5
LRRC40-201ENST00000370952 ABCC11Q96J66 1382 aa11.93□□□□□ -0.5
LRRC40-201ENST00000370952 SBNO2Q9Y2G9 1366 aa11.93□□□□□ -0.5
LRRC40-201ENST00000370952 ZGPATQ8N5A5 531 aaKnown RBP11.93□□□□□ -0.5
LRRC40-201ENST00000370952 RNF214Q8ND24 703 aa11.93□□□□□ -0.5
LRRC40-201ENST00000370952 TET3O43151 1660 aa11.93□□□□□ -0.5
LRRC40-201ENST00000370952 QRICH2Q9H0J4 1663 aa11.93□□□□□ -0.5
LRRC40-201ENST00000370952 CDC45O75419 566 aa11.93□□□□□ -0.5
LRRC40-201ENST00000370952 MAP7D2Q96T17 732 aa11.93□□□□□ -0.5
LRRC40-201ENST00000370952 GGNBP2Q9H3C7 697 aa11.93□□□□□ -0.5
LRRC40-201ENST00000370952 PODXL2Q9NZ53 605 aa11.93□□□□□ -0.5
LRRC40-201ENST00000370952 MYO3AQ8NEV4 1616 aa11.92□□□□□ -0.5
LRRC40-201ENST00000370952 CFAP65Q6ZU64 1925 aaKnown RBP11.92□□□□□ -0.5
LRRC40-201ENST00000370952 KIF1BO60333 1816 aa11.92□□□□□ -0.5
LRRC40-201ENST00000370952 MYOM2P54296 1465 aa11.92□□□□□ -0.5
LRRC40-201ENST00000370952 SYCE3A1L190 88 aa11.92□□□□□ -0.5
LRRC40-201ENST00000370952 GSPT1P15170 499 aaKnown RBP11.92□□□□□ -0.5
LRRC40-201ENST00000370952 NUCB2P80303 420 aa11.92□□□□□ -0.5
LRRC40-201ENST00000370952 HS1BP3Q53T59 392 aa11.92□□□□□ -0.5
LRRC40-201ENST00000370952 SIRT2Q8IXJ6 389 aa11.92□□□□□ -0.5
LRRC40-201ENST00000370952 NSFL1CQ9UNZ2 370 aaKnown RBP11.92□□□□□ -0.5
LRRC40-201ENST00000370952 MROH2AA6NES4 1674 aa11.92□□□□□ -0.5
LRRC40-201ENST00000370952 ZBTB7BO15156 539 aaPredicted RBP11.92□□□□□ -0.5
LRRC40-201ENST00000370952 JARID2Q92833 1246 aaPredicted RBP11.92□□□□□ -0.5
LRRC40-201ENST00000370952 GCC1Q96CN9 775 aa11.92□□□□□ -0.5
LRRC40-201ENST00000370952 SENP3Q9H4L4 574 aaPredicted RBP11.92□□□□□ -0.5
LRRC40-201ENST00000370952 ELL2O00472 640 aaPredicted RBP11.91□□□□□ -0.5
LRRC40-201ENST00000370952 SAFB2Q14151 953 aaKnown RBP eCLIP11.91□□□□□ -0.5
LRRC40-201ENST00000370952 MPNDQ8N594 471 aa11.91□□□□□ -0.5
LRRC40-201ENST00000370952 TMEM63CQ9P1W3 806 aa11.91□□□□□ -0.5
LRRC40-201ENST00000370952 ADGRL1O94910 1474 aa11.91□□□□□ -0.5
LRRC40-201ENST00000370952 ABCC1P33527 1531 aa11.91□□□□□ -0.5
LRRC40-201ENST00000370952 CYP2E1P05181 493 aaPredicted RBP11.91□□□□□ -0.5
LRRC40-201ENST00000370952 CABP2Q9NPB3 220 aa11.91□□□□□ -0.5
LRRC40-201ENST00000370952 PLCH2O75038 1416 aa11.9□□□□□ -0.5
LRRC40-201ENST00000370952 RABEP1Q15276 862 aa11.9□□□□□ -0.5
LRRC40-201ENST00000370952 NCBP3Q53F19 620 aaKnown RBP11.9□□□□□ -0.5
LRRC40-201ENST00000370952 ZHX1Q9UKY1 873 aaPredicted RBP11.9□□□□□ -0.5
LRRC40-201ENST00000370952 ZC3H13Q5T200 1668 aaKnown RBP11.89□□□□□ -0.51
LRRC40-201ENST00000370952 DYNC1I1O14576 645 aa11.89□□□□□ -0.51
LRRC40-201ENST00000370952 NUTM2DQ5VT03 806 aaPredicted RBP11.89□□□□□ -0.51
LRRC40-201ENST00000370952 C16orf71Q8IYS4 520 aaPredicted RBP11.89□□□□□ -0.51
LRRC40-201ENST00000370952 TSC1Q92574 1164 aa11.89□□□□□ -0.51
LRRC40-201ENST00000370952 THUMPD2Q9BTF0 503 aaKnown RBP11.89□□□□□ -0.51
LRRC40-201ENST00000370952 ZDHHC9Q9Y397 364 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms