RNA–Protein interactions for RNA: ENST00000369509.1

VANGL1-203, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 2,062 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-203ENST00000369509 ZBED9Q6R2W3 1325 aa14.89□□□□□ -0.03
VANGL1-203ENST00000369509 MARF1Q9Y4F3 1742 aaKnown RBP14.88□□□□□ -0.03
VANGL1-203ENST00000369509 PIK3C2AO00443 1686 aa14.88□□□□□ -0.03
VANGL1-203ENST00000369509 COL3A1P02461 1466 aaPredicted RBP14.88□□□□□ -0.03
VANGL1-203ENST00000369509 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.88□□□□□ -0.03
VANGL1-203ENST00000369509 TNNT2P45379 298 aaPredicted RBP14.87□□□□□ -0.03
VANGL1-203ENST00000369509 NEFLP07196 543 aa14.86□□□□□ -0.03
VANGL1-203ENST00000369509 OVOS2A0A0J9YW53 1432 aa14.86□□□□□ -0.03
VANGL1-203ENST00000369509 OVOS2Q6IE36 1432 aa14.86□□□□□ -0.03
VANGL1-203ENST00000369509 NCOA3Q9Y6Q9 1424 aa14.86□□□□□ -0.03
VANGL1-203ENST00000369509 TTC21BQ7Z4L5 1316 aa14.85□□□□□ -0.03
VANGL1-203ENST00000369509 NME9Q86XW9 330 aa14.85□□□□□ -0.03
VANGL1-203ENST00000369509 SMG6Q86US8 1419 aaKnown RBP14.85□□□□□ -0.03
VANGL1-203ENST00000369509 MTHFSP49914 203 aa14.85□□□□□ -0.03
VANGL1-203ENST00000369509 PMFBP1Q8TBY8 1022 aa14.85□□□□□ -0.03
VANGL1-203ENST00000369509 KIF1AQ12756 1690 aa14.84□□□□□ -0.03
VANGL1-203ENST00000369509 PROSER2Q86WR7 435 aaPredicted RBP14.84□□□□□ -0.03
VANGL1-203ENST00000369509 DCCP43146 1447 aa14.84□□□□□ -0.03
VANGL1-203ENST00000369509 TMEM94Q12767 1356 aa14.84□□□□□ -0.03
VANGL1-203ENST00000369509 ADAMTS8Q9UP79 889 aa14.83□□□□□ -0.03
VANGL1-203ENST00000369509 ZRANB1Q9UGI0 708 aa14.83□□□□□ -0.04
VANGL1-203ENST00000369509 LRRC7Q96NW7 1537 aa14.82□□□□□ -0.04
VANGL1-203ENST00000369509 AATKQ6ZMQ8 1374 aa14.82□□□□□ -0.04
VANGL1-203ENST00000369509 PNPLA6Q8IY17 1366 aa14.82□□□□□ -0.04
VANGL1-203ENST00000369509 TTC21AQ8NDW8 1320 aa14.82□□□□□ -0.04
VANGL1-203ENST00000369509 WDR43Q15061 677 aaKnown RBP eCLIP14.81□□□□□ -0.04
VANGL1-203ENST00000369509 NGDNQ8NEJ9 315 aaKnown RBP14.81□□□□□ -0.04
VANGL1-203ENST00000369509 TRPM3Q9HCF6 1732 aaPredicted RBP14.81□□□□□ -0.04
VANGL1-203ENST00000369509 C1orf167Q5SNV9 1468 aa14.8□□□□□ -0.04
VANGL1-203ENST00000369509 C14orf37Q86TY3 774 aa14.8□□□□□ -0.04
VANGL1-203ENST00000369509 C19orf44Q9H6X5 657 aa14.8□□□□□ -0.04
VANGL1-203ENST00000369509 MST1RQ04912 1400 aa14.8□□□□□ -0.04
VANGL1-203ENST00000369509 CDK12Q9NYV4 1490 aaPredicted RBP14.8□□□□□ -0.04
VANGL1-203ENST00000369509 USP31Q70CQ4 1352 aa14.8□□□□□ -0.04
VANGL1-203ENST00000369509 FKBP8Q14318 412 aa14.8□□□□□ -0.04
VANGL1-203ENST00000369509 PHF8Q9UPP1 1060 aa14.8□□□□□ -0.04
VANGL1-203ENST00000369509 PEAK1Q9H792 1746 aa14.79□□□□□ -0.04
VANGL1-203ENST00000369509 COG3Q96JB2 828 aa14.79□□□□□ -0.04
VANGL1-203ENST00000369509 CFAP53Q96M91 514 aa14.78□□□□□ -0.04
VANGL1-203ENST00000369509 POLKQ9UBT6 870 aa14.78□□□□□ -0.04
VANGL1-203ENST00000369509 FBLN1P23142 703 aa14.77□□□□□ -0.04
VANGL1-203ENST00000369509 IQSEC2Q5JU85 1478 aa14.77□□□□□ -0.05
VANGL1-203ENST00000369509 ZNF335Q9H4Z2 1342 aaPredicted RBP14.76□□□□□ -0.05
VANGL1-203ENST00000369509 SENP3-EIF4A1A0A087X0R7 540 aa14.76□□□□□ -0.05
VANGL1-203ENST00000369509 ESCO1Q5FWF5 840 aa14.75□□□□□ -0.05
VANGL1-203ENST00000369509 ALS2Q96Q42 1657 aa14.75□□□□□ -0.05
VANGL1-203ENST00000369509 ORAI2Q96SN7 254 aa14.75□□□□□ -0.05
VANGL1-203ENST00000369509 EMILIN1Q9Y6C2 1016 aa14.74□□□□□ -0.05
VANGL1-203ENST00000369509 MSH6P52701 1360 aa14.73□□□□□ -0.05
VANGL1-203ENST00000369509 LTN1O94822 1766 aa14.73□□□□□ -0.05
VANGL1-203ENST00000369509 RGPD1P0DJD0 1748 aa14.73□□□□□ -0.05
VANGL1-203ENST00000369509 CCDC146Q8IYE0 955 aa14.72□□□□□ -0.05
VANGL1-203ENST00000369509 ATF3P18847 181 aa14.72□□□□□ -0.05
VANGL1-203ENST00000369509 RRS1Q15050 365 aaKnown RBP14.72□□□□□ -0.05
VANGL1-203ENST00000369509 NFAT5O94916 1531 aa14.71□□□□□ -0.05
VANGL1-203ENST00000369509 CADPS2Q86UW7 1296 aa14.71□□□□□ -0.05
VANGL1-203ENST00000369509 PHRF1Q9P1Y6 1649 aaKnown RBP14.71□□□□□ -0.05
VANGL1-203ENST00000369509 ZNF521Q96K83 1311 aa14.7□□□□□ -0.06
VANGL1-203ENST00000369509 DIAPH1O60610 1272 aaKnown RBP14.7□□□□□ -0.06
VANGL1-203ENST00000369509 DMRT2Q9Y5R5 561 aa14.7□□□□□ -0.06
VANGL1-203ENST00000369509 SLIT3O75094 1523 aa14.7□□□□□ -0.06
VANGL1-203ENST00000369509 FOXO3O43524 673 aa14.69□□□□□ -0.06
VANGL1-203ENST00000369509 NUDCQ9Y266 331 aa14.69□□□□□ -0.06
VANGL1-203ENST00000369509 SALL2Q9Y467 1007 aaPredicted RBP14.69□□□□□ -0.06
VANGL1-203ENST00000369509 CRYBG1Q9Y4K1 1723 aa14.68□□□□□ -0.06
VANGL1-203ENST00000369509 APAF1O14727 1248 aa14.68□□□□□ -0.06
VANGL1-203ENST00000369509 PPM1GO15355 546 aaPredicted RBP14.68□□□□□ -0.06
VANGL1-203ENST00000369509 U2AF1L5P0DN76 240 aaPredicted RBP14.68□□□□□ -0.06
VANGL1-203ENST00000369509 NLRP6P59044 892 aa14.68□□□□□ -0.06
VANGL1-203ENST00000369509 U2AF1Q01081 240 aaKnown RBP eCLIP14.68□□□□□ -0.06
VANGL1-203ENST00000369509 PSME1Q06323 249 aa14.68□□□□□ -0.06
VANGL1-203ENST00000369509 ABTB2Q8N961 1025 aa14.68□□□□□ -0.06
VANGL1-203ENST00000369509 RUNDC1Q96C34 613 aa14.68□□□□□ -0.06
VANGL1-203ENST00000369509 PXDNQ92626 1479 aa14.68□□□□□ -0.06
VANGL1-203ENST00000369509 IL13P35225 146 aa14.67□□□□□ -0.06
VANGL1-203ENST00000369509 PDE3BQ13370 1112 aa14.67□□□□□ -0.06
VANGL1-203ENST00000369509 LTBP4Q8N2S1 1624 aa14.67□□□□□ -0.06
VANGL1-203ENST00000369509 MAP3K19Q56UN5 1328 aa14.67□□□□□ -0.06
VANGL1-203ENST00000369509 PAK3O75914 559 aaPredicted RBP14.67□□□□□ -0.06
VANGL1-203ENST00000369509 TSHZ2Q9NRE2 1034 aa14.67□□□□□ -0.06
VANGL1-203ENST00000369509 SBNO1A3KN83 1393 aa14.67□□□□□ -0.06
VANGL1-203ENST00000369509 PLEKHF1Q96S99 279 aa14.66□□□□□ -0.06
VANGL1-203ENST00000369509 U2SURPO15042 1029 aaKnown RBP14.65□□□□□ -0.06
VANGL1-203ENST00000369509 NUTM2GQ5VZR2 741 aa14.65□□□□□ -0.06
VANGL1-203ENST00000369509 NGEFQ8N5V2 710 aa14.65□□□□□ -0.06
VANGL1-203ENST00000369509 FLT4P35916 1363 aa14.65□□□□□ -0.06
VANGL1-203ENST00000369509 KIF24Q5T7B8 1368 aa14.65□□□□□ -0.06
VANGL1-203ENST00000369509 NHSL1Q5SYE7 1610 aa14.65□□□□□ -0.06
VANGL1-203ENST00000369509 XPCQ01831 940 aaPredicted RBP14.65□□□□□ -0.06
VANGL1-203ENST00000369509 MED1Q15648 1581 aaPredicted RBP14.64□□□□□ -0.07
VANGL1-203ENST00000369509 DLG5Q8TDM6 1919 aa14.64□□□□□ -0.07
VANGL1-203ENST00000369509 KRT28Q7Z3Y7 464 aa14.64□□□□□ -0.07
VANGL1-203ENST00000369509 PHF23Q9BUL5 403 aaPredicted RBP14.64□□□□□ -0.07
VANGL1-203ENST00000369509 TCP11L2Q8N4U5 519 aa14.64□□□□□ -0.07
VANGL1-203ENST00000369509 CDCA7LQ96GN5 454 aa14.64□□□□□ -0.07
VANGL1-203ENST00000369509 USP19O94966 1318 aa14.63□□□□□ -0.07
VANGL1-203ENST00000369509 SOX12O15370 315 aa14.63□□□□□ -0.07
VANGL1-203ENST00000369509 NCBP3Q53F19 620 aaKnown RBP14.63□□□□□ -0.07
VANGL1-203ENST00000369509 RSPH6AQ9H0K4 717 aa14.63□□□□□ -0.07
VANGL1-203ENST00000369509 RTL1A6NKG5 1358 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms