RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 KIF7Q2M1P5 1343 aa18.76■□□□□ 0.59
NUCKS1-201ENST00000367142 ATP2B1P20020 1258 aa18.76■□□□□ 0.59
NUCKS1-201ENST00000367142 RBM5P52756 815 aaKnown RBP eCLIP18.76■□□□□ 0.59
NUCKS1-201ENST00000367142 CABP4P57796 275 aa18.76■□□□□ 0.59
NUCKS1-201ENST00000367142 C22orf23Q9BZE7 217 aa18.76■□□□□ 0.59
NUCKS1-201ENST00000367142 PDCL3Q9H2J4 239 aa18.76■□□□□ 0.59
NUCKS1-201ENST00000367142 NUTM2BA6NNL0 878 aaPredicted RBP18.76■□□□□ 0.59
NUCKS1-201ENST00000367142 NUTM2EB1AL46 878 aaPredicted RBP18.76■□□□□ 0.59
NUCKS1-201ENST00000367142 HMGB2P26583 209 aaKnown RBP18.76■□□□□ 0.59
NUCKS1-201ENST00000367142 CALRP27797 417 aaKnown RBP18.76■□□□□ 0.59
NUCKS1-201ENST00000367142 NUTM2AQ8IVF1 878 aaPredicted RBP18.76■□□□□ 0.59
NUCKS1-201ENST00000367142 TXNDC2Q86VQ3 553 aa18.75■□□□□ 0.59
NUCKS1-201ENST00000367142 NOM1Q5C9Z4 860 aaKnown RBP18.75■□□□□ 0.59
NUCKS1-201ENST00000367142 ZRSR2Q15696 482 aaKnown RBP18.74■□□□□ 0.59
NUCKS1-201ENST00000367142 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.74■□□□□ 0.59
NUCKS1-201ENST00000367142 KINO60870 393 aaKnown RBP18.74■□□□□ 0.59
NUCKS1-201ENST00000367142 TTLL5Q6EMB2 1281 aa18.73■□□□□ 0.59
NUCKS1-201ENST00000367142 MPHOSPH10O00566 681 aaKnown RBP18.73■□□□□ 0.59
NUCKS1-201ENST00000367142 SOGA3Q5TF21 947 aa18.73■□□□□ 0.59
NUCKS1-201ENST00000367142 CCP110O43303 1012 aa18.73■□□□□ 0.59
NUCKS1-201ENST00000367142 TOM1L2Q6ZVM7 507 aa18.73■□□□□ 0.59
NUCKS1-201ENST00000367142 SPG7Q9UQ90 795 aa18.73■□□□□ 0.59
NUCKS1-201ENST00000367142 PNISRQ8TF01 805 aaKnown RBP18.72■□□□□ 0.59
NUCKS1-201ENST00000367142 CCDC191Q8NCU4 936 aa18.72■□□□□ 0.59
NUCKS1-201ENST00000367142 SMC2O95347 1197 aa18.71■□□□□ 0.59
NUCKS1-201ENST00000367142 PDCP20941 246 aa18.71■□□□□ 0.59
NUCKS1-201ENST00000367142 ZSCAN25Q6NSZ9 544 aa18.71■□□□□ 0.59
NUCKS1-201ENST00000367142 ANKRD18AQ8IVF6 992 aa18.71■□□□□ 0.59
NUCKS1-201ENST00000367142 FYCO1Q9BQS8 1478 aa18.71■□□□□ 0.59
NUCKS1-201ENST00000367142 RRBP1Q9P2E9 1410 aaKnown RBP18.71■□□□□ 0.59
NUCKS1-201ENST00000367142 TRIM22Q8IYM9 498 aa18.71■□□□□ 0.59
NUCKS1-201ENST00000367142 ERLIN2O94905 339 aa18.7■□□□□ 0.58
NUCKS1-201ENST00000367142 JMYQ8N9B5 988 aa18.7■□□□□ 0.58
NUCKS1-201ENST00000367142 ZNHIT6Q9NWK9 470 aaKnown RBP18.7■□□□□ 0.58
NUCKS1-201ENST00000367142 CCDC39Q9UFE4 941 aa18.7■□□□□ 0.58
NUCKS1-201ENST00000367142 CCDC69A6NI79 296 aa18.7■□□□□ 0.58
NUCKS1-201ENST00000367142 STK38Q15208 465 aa18.7■□□□□ 0.58
NUCKS1-201ENST00000367142 STIM1Q13586 685 aa18.69■□□□□ 0.58
NUCKS1-201ENST00000367142 LUC7LQ9NQ29 371 aaKnown RBP18.69■□□□□ 0.58
NUCKS1-201ENST00000367142 TMEM132EQ6IEE7 984 aa18.69■□□□□ 0.58
NUCKS1-201ENST00000367142 TXLNBQ8N3L3 684 aa18.69■□□□□ 0.58
NUCKS1-201ENST00000367142 MAP7D2Q96T17 732 aa18.69■□□□□ 0.58
NUCKS1-201ENST00000367142 MPHOSPH8Q99549 860 aa18.69■□□□□ 0.58
NUCKS1-201ENST00000367142 GNAI2P04899 355 aa18.68■□□□□ 0.58
NUCKS1-201ENST00000367142 DESP17661 470 aa18.68■□□□□ 0.58
NUCKS1-201ENST00000367142 THEMISQ8N1K5 641 aaPredicted RBP18.68■□□□□ 0.58
NUCKS1-201ENST00000367142 DDX54Q8TDD1 881 aaKnown RBP18.68■□□□□ 0.58
NUCKS1-201ENST00000367142 MCM2P49736 904 aa18.68■□□□□ 0.58
NUCKS1-201ENST00000367142 BRPF1P55201 1214 aaPredicted RBP18.68■□□□□ 0.58
NUCKS1-201ENST00000367142 ZHX3Q9H4I2 956 aa18.68■□□□□ 0.58
NUCKS1-201ENST00000367142 DACH1Q9UI36 760 aa18.68■□□□□ 0.58
NUCKS1-201ENST00000367142 NEFHP12036 1026 aa18.67■□□□□ 0.58
NUCKS1-201ENST00000367142 CUX1P39880 1505 aa18.67■□□□□ 0.58
NUCKS1-201ENST00000367142 PANK1Q8TE04 598 aa18.67■□□□□ 0.58
NUCKS1-201ENST00000367142 CNTLNQ9NXG0 1405 aa18.66■□□□□ 0.58
NUCKS1-201ENST00000367142 ZSCAN29Q8IWY8 852 aaPredicted RBP18.66■□□□□ 0.58
NUCKS1-201ENST00000367142 TRIM5Q9C035 493 aa18.66■□□□□ 0.58
NUCKS1-201ENST00000367142 NOL7Q9UMY1 257 aaKnown RBP18.66■□□□□ 0.58
NUCKS1-201ENST00000367142 CCDC57Q2TAC2 916 aa18.66■□□□□ 0.58
NUCKS1-201ENST00000367142 SKIDA1Q1XH10 827 aa18.66■□□□□ 0.58
NUCKS1-201ENST00000367142 TRIM21P19474 475 aaKnown RBP18.65■□□□□ 0.58
NUCKS1-201ENST00000367142 ARHGAP5Q13017 1502 aa18.65■□□□□ 0.58
NUCKS1-201ENST00000367142 NEBLO76041 1014 aa18.65■□□□□ 0.58
NUCKS1-201ENST00000367142 PRKAR2BP31323 418 aa18.65■□□□□ 0.58
NUCKS1-201ENST00000367142 TWISTNBQ3B726 338 aaPredicted RBP18.65■□□□□ 0.58
NUCKS1-201ENST00000367142 TANGO6Q9C0B7 1094 aa18.65■□□□□ 0.58
NUCKS1-201ENST00000367142 FAM13BQ9NYF5 915 aa18.65■□□□□ 0.58
NUCKS1-201ENST00000367142 GAPVD1Q14C86 1478 aa18.65■□□□□ 0.58
NUCKS1-201ENST00000367142 MTHFSP49914 203 aa18.65■□□□□ 0.58
NUCKS1-201ENST00000367142 HDGFL1Q5TGJ6 251 aa18.64■□□□□ 0.58
NUCKS1-201ENST00000367142 ANKRD1Q15327 319 aa18.64■□□□□ 0.57
NUCKS1-201ENST00000367142 SEPT7Q16181 437 aaKnown RBP18.64■□□□□ 0.57
NUCKS1-201ENST00000367142 TMOD2Q9NZR1 351 aa18.64■□□□□ 0.57
NUCKS1-201ENST00000367142 MATR3P43243 847 aaKnown RBP eCLIP18.63■□□□□ 0.57
NUCKS1-201ENST00000367142 DEF6Q9H4E7 631 aa18.63■□□□□ 0.57
NUCKS1-201ENST00000367142 CCT4P50991 539 aaKnown RBP18.63■□□□□ 0.57
NUCKS1-201ENST00000367142 DHX8Q14562 1220 aaKnown RBP18.63■□□□□ 0.57
NUCKS1-201ENST00000367142 H0YHG0 523 aa18.63■□□□□ 0.57
NUCKS1-201ENST00000367142 MBD3O95983 291 aa18.63■□□□□ 0.57
NUCKS1-201ENST00000367142 ZNF530Q6P9A1 599 aaPredicted RBP18.63■□□□□ 0.57
NUCKS1-201ENST00000367142 STK11IPQ8N1F8 1099 aa18.62■□□□□ 0.57
NUCKS1-201ENST00000367142 NUP133Q8WUM0 1156 aa18.62■□□□□ 0.57
NUCKS1-201ENST00000367142 WDHD1O75717 1129 aaPredicted RBP18.62■□□□□ 0.57
NUCKS1-201ENST00000367142 BMP2KQ9NSY1 1161 aaPredicted RBP18.62■□□□□ 0.57
NUCKS1-201ENST00000367142 ZNF76P36508 570 aa18.62■□□□□ 0.57
NUCKS1-201ENST00000367142 FAM43AQ8N2R8 423 aa18.62■□□□□ 0.57
NUCKS1-201ENST00000367142 ZNF692Q9BU19 519 aaPredicted RBP18.62■□□□□ 0.57
NUCKS1-201ENST00000367142 GCC1Q96CN9 775 aa18.62■□□□□ 0.57
NUCKS1-201ENST00000367142 SCAPERQ9BY12 1400 aa18.62■□□□□ 0.57
NUCKS1-201ENST00000367142 PRDM2Q13029 1718 aa18.62■□□□□ 0.57
NUCKS1-201ENST00000367142 FMNL2Q96PY5 1086 aa18.61■□□□□ 0.57
NUCKS1-201ENST00000367142 DNAI2Q9GZS0 605 aa18.61■□□□□ 0.57
NUCKS1-201ENST00000367142 CYP46A1Q9Y6A2 500 aa18.61■□□□□ 0.57
NUCKS1-201ENST00000367142 ANKRD62A6NC57 917 aa18.61■□□□□ 0.57
NUCKS1-201ENST00000367142 CWC15Q9P013 229 aaKnown RBP18.61■□□□□ 0.57
NUCKS1-201ENST00000367142 NEK4P51957 841 aa18.61■□□□□ 0.57
NUCKS1-201ENST00000367142 AEBP1Q8IUX7 1158 aa18.61■□□□□ 0.57
NUCKS1-201ENST00000367142 PIP4K2BP78356 416 aa18.61■□□□□ 0.57
NUCKS1-201ENST00000367142 PRAM1Q96QH2 718 aa18.61■□□□□ 0.57
NUCKS1-201ENST00000367142 TSPY26PQ9H489 355 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms