RNA–Protein interactions for RNA: ENST00000366747.7

MRPL55-218, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-218ENST00000366747 ZNF692Q9BU19 519 aaPredicted RBP20.63■□□□□ 0.89
MRPL55-218ENST00000366747 CABP1Q9NZU7 370 aa20.63■□□□□ 0.89
MRPL55-218ENST00000366747 USP47Q96K76 1375 aa20.62■□□□□ 0.89
MRPL55-218ENST00000366747 USP21Q9UK80 565 aa20.62■□□□□ 0.89
MRPL55-218ENST00000366747 CDK12Q9NYV4 1490 aaPredicted RBP20.62■□□□□ 0.89
MRPL55-218ENST00000366747 USP6P35125 1406 aa20.61■□□□□ 0.89
MRPL55-218ENST00000366747 TESK2Q96S53 571 aa20.61■□□□□ 0.89
MRPL55-218ENST00000366747 MARF1Q9Y4F3 1742 aaKnown RBP20.61■□□□□ 0.89
MRPL55-218ENST00000366747 ST20-MTHFSA0A0A6YYL1 179 aa20.6■□□□□ 0.89
MRPL55-218ENST00000366747 RXRBP28702 533 aa20.6■□□□□ 0.89
MRPL55-218ENST00000366747 TRPC5Q9UL62 973 aaPredicted RBP20.6■□□□□ 0.89
MRPL55-218ENST00000366747 NINLQ9Y2I6 1382 aa20.59■□□□□ 0.89
MRPL55-218ENST00000366747 SLIT2O94813 1529 aa20.59■□□□□ 0.89
MRPL55-218ENST00000366747 ABCA3Q99758 1704 aa20.58■□□□□ 0.89
MRPL55-218ENST00000366747 RBM6P78332 1123 aaKnown RBP20.58■□□□□ 0.89
MRPL55-218ENST00000366747 CABLES1Q8TDN4 633 aa20.58■□□□□ 0.89
MRPL55-218ENST00000366747 QTRT2Q9H974 415 aaKnown RBP20.58■□□□□ 0.89
MRPL55-218ENST00000366747 CPSF1Q10570 1443 aaKnown RBP20.57■□□□□ 0.88
MRPL55-218ENST00000366747 SSH2Q76I76 1423 aa20.57■□□□□ 0.88
MRPL55-218ENST00000366747 ABTB2Q8N961 1025 aa20.57■□□□□ 0.88
MRPL55-218ENST00000366747 BCL9LQ86UU0 1499 aa20.56■□□□□ 0.88
MRPL55-218ENST00000366747 ATRNO75882 1429 aa20.56■□□□□ 0.88
MRPL55-218ENST00000366747 NLRP13Q86W25 1043 aa20.56■□□□□ 0.88
MRPL55-218ENST00000366747 TMF1P82094 1093 aa20.55■□□□□ 0.88
MRPL55-218ENST00000366747 CDCA8Q53HL2 280 aa20.55■□□□□ 0.88
MRPL55-218ENST00000366747 UNC5CLQ8IV45 518 aa20.55■□□□□ 0.88
MRPL55-218ENST00000366747 USP19O94966 1318 aa20.54■□□□□ 0.88
MRPL55-218ENST00000366747 TTC21AQ8NDW8 1320 aa20.54■□□□□ 0.88
MRPL55-218ENST00000366747 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.54■□□□□ 0.88
MRPL55-218ENST00000366747 CRYBG1Q9Y4K1 1723 aa20.53■□□□□ 0.88
MRPL55-218ENST00000366747 HDGFL2Q7Z4V5 671 aaPredicted RBP20.52■□□□□ 0.88
MRPL55-218ENST00000366747 TERF2IPQ9NYB0 399 aa20.52■□□□□ 0.88
MRPL55-218ENST00000366747 KTN1Q86UP2 1357 aaKnown RBP20.51■□□□□ 0.87
MRPL55-218ENST00000366747 NWD2Q9ULI1 1742 aa20.51■□□□□ 0.87
MRPL55-218ENST00000366747 TTC21BQ7Z4L5 1316 aa20.51■□□□□ 0.87
MRPL55-218ENST00000366747 AKAP12Q02952 1782 aa20.5■□□□□ 0.87
MRPL55-218ENST00000366747 COL14A1Q05707 1796 aaKnown RBP20.5■□□□□ 0.87
MRPL55-218ENST00000366747 PHRF1Q9P1Y6 1649 aaKnown RBP20.49■□□□□ 0.87
MRPL55-218ENST00000366747 CPDO75976 1380 aa20.49■□□□□ 0.87
MRPL55-218ENST00000366747 FAM83GA6ND36 823 aa20.49■□□□□ 0.87
MRPL55-218ENST00000366747 TMC1Q8TDI8 760 aa20.49■□□□□ 0.87
MRPL55-218ENST00000366747 PRDM11Q9NQV5 511 aa20.49■□□□□ 0.87
MRPL55-218ENST00000366747 PLEKHG5O94827 1062 aa20.48■□□□□ 0.87
MRPL55-218ENST00000366747 VPS72Q15906 364 aa20.48■□□□□ 0.87
MRPL55-218ENST00000366747 GJD4Q96KN9 370 aaPredicted RBP20.48■□□□□ 0.87
MRPL55-218ENST00000366747 CD163L1Q9NR16 1453 aa20.48■□□□□ 0.87
MRPL55-218ENST00000366747 NRKQ7Z2Y5 1582 aa20.47■□□□□ 0.87
MRPL55-218ENST00000366747 EDC4Q6P2E9 1401 aaKnown RBP20.47■□□□□ 0.87
MRPL55-218ENST00000366747 NLRP6P59044 892 aa20.47■□□□□ 0.87
MRPL55-218ENST00000366747 NUTM2GQ5VZR2 741 aa20.47■□□□□ 0.87
MRPL55-218ENST00000366747 PLCH1Q4KWH8 1693 aa20.47■□□□□ 0.87
MRPL55-218ENST00000366747 SLIT3O75094 1523 aa20.47■□□□□ 0.87
MRPL55-218ENST00000366747 KIAA0232Q92628 1395 aa20.46■□□□□ 0.87
MRPL55-218ENST00000366747 GCP02774 474 aa20.46■□□□□ 0.87
MRPL55-218ENST00000366747 SLC12A5Q9H2X9 1139 aa20.46■□□□□ 0.87
MRPL55-218ENST00000366747 MON2Q7Z3U7 1717 aa20.46■□□□□ 0.87
MRPL55-218ENST00000366747 RGS12O14924 1447 aa20.45■□□□□ 0.86
MRPL55-218ENST00000366747 EIF4G2P78344 907 aaKnown RBP eCLIP20.45■□□□□ 0.86
MRPL55-218ENST00000366747 KCNH5Q8NCM2 988 aa20.45■□□□□ 0.86
MRPL55-218ENST00000366747 BTG4Q9NY30 223 aa20.45■□□□□ 0.86
MRPL55-218ENST00000366747 A0A1W2PP64 1363 aa20.45■□□□□ 0.86
MRPL55-218ENST00000366747 PIK3C2AO00443 1686 aa20.44■□□□□ 0.86
MRPL55-218ENST00000366747 USP31Q70CQ4 1352 aa20.44■□□□□ 0.86
MRPL55-218ENST00000366747 ANKRD36BQ8N2N9 1353 aa20.44■□□□□ 0.86
MRPL55-218ENST00000366747 ZC3H6P61129 1189 aaKnown RBP20.42■□□□□ 0.86
MRPL55-218ENST00000366747 NRAPQ86VF7 1730 aa20.41■□□□□ 0.86
MRPL55-218ENST00000366747 GLI3P10071 1580 aa20.39■□□□□ 0.85
MRPL55-218ENST00000366747 USP54Q70EL1 1684 aa20.38■□□□□ 0.85
MRPL55-218ENST00000366747 AATKQ6ZMQ8 1374 aa20.38■□□□□ 0.85
MRPL55-218ENST00000366747 ONECUT3O60422 494 aaPredicted RBP20.38■□□□□ 0.85
MRPL55-218ENST00000366747 CCDC9Q9Y3X0 531 aaKnown RBP20.38■□□□□ 0.85
MRPL55-218ENST00000366747 CHRNA2Q15822 529 aa20.37■□□□□ 0.85
MRPL55-218ENST00000366747 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.37■□□□□ 0.85
MRPL55-218ENST00000366747 ABCC6O95255 1503 aa20.37■□□□□ 0.85
MRPL55-218ENST00000366747 LMO7Q8WWI1 1683 aa20.36■□□□□ 0.85
MRPL55-218ENST00000366747 SPATA31A5Q5VU36 1347 aa20.36■□□□□ 0.85
MRPL55-218ENST00000366747 SPATA31A7Q8IWB4 1347 aa20.36■□□□□ 0.85
MRPL55-218ENST00000366747 HSPA5P11021 654 aaKnown RBP20.36■□□□□ 0.85
MRPL55-218ENST00000366747 ARHGEF25Q86VW2 580 aa20.34■□□□□ 0.85
MRPL55-218ENST00000366747 NME9Q86XW9 330 aa20.34■□□□□ 0.85
MRPL55-218ENST00000366747 OVOS2A0A0J9YW53 1432 aa20.34■□□□□ 0.85
MRPL55-218ENST00000366747 OVOS2Q6IE36 1432 aa20.34■□□□□ 0.85
MRPL55-218ENST00000366747 NFAT5O94916 1531 aa20.33■□□□□ 0.85
MRPL55-218ENST00000366747 CAMTA1Q9Y6Y1 1673 aa20.33■□□□□ 0.85
MRPL55-218ENST00000366747 EVA1CP58658 441 aa20.33■□□□□ 0.85
MRPL55-218ENST00000366747 COL5A2P05997 1499 aaPredicted RBP20.32■□□□□ 0.84
MRPL55-218ENST00000366747 SPATA31A1Q5TZJ5 1347 aa20.31■□□□□ 0.84
MRPL55-218ENST00000366747 STRN4Q9NRL3 753 aa20.31■□□□□ 0.84
MRPL55-218ENST00000366747 SEPT12Q8IYM1 358 aa20.3■□□□□ 0.84
MRPL55-218ENST00000366747 COG3Q96JB2 828 aa20.3■□□□□ 0.84
MRPL55-218ENST00000366747 THRAP3Q9Y2W1 955 aaKnown RBP20.3■□□□□ 0.84
MRPL55-218ENST00000366747 BARGINQ6ZT62 677 aa20.29■□□□□ 0.84
MRPL55-218ENST00000366747 UPF1Q92900 1129 aaKnown RBP eCLIP20.29■□□□□ 0.84
MRPL55-218ENST00000366747 CRB1P82279 1406 aa20.27■□□□□ 0.84
MRPL55-218ENST00000366747 MYOM1P52179 1685 aa20.27■□□□□ 0.84
MRPL55-218ENST00000366747 FAM98CQ17RN3 349 aaKnown RBP20.27■□□□□ 0.84
MRPL55-218ENST00000366747 ZRANB1Q9UGI0 708 aa20.27■□□□□ 0.84
MRPL55-218ENST00000366747 ZBTB7CA1YPR0 619 aa20.26■□□□□ 0.83
MRPL55-218ENST00000366747 LARP1Q6PKG0 1096 aaKnown RBP20.26■□□□□ 0.83
MRPL55-218ENST00000366747 TCP11L2Q8N4U5 519 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms