RNA–Protein interactions for RNA: ENST00000364351.1

RNU4-40P-201, Transcript of RNA, U4 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU4-40P, Length 143 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-40P-201ENST00000364351 TLL2Q9Y6L7 1015 aa12.01□□□□□ -0.49
RNU4-40P-201ENST00000364351 CSPP1Q1MSJ5 1256 aa12□□□□□ -0.49
RNU4-40P-201ENST00000364351 ZBTB3Q9H5J0 574 aa12□□□□□ -0.49
RNU4-40P-201ENST00000364351 BMP1P13497 986 aa11.99□□□□□ -0.49
RNU4-40P-201ENST00000364351 TERTO14746 1132 aaKnown RBP11.98□□□□□ -0.49
RNU4-40P-201ENST00000364351 VARSP26640 1264 aaKnown RBP11.98□□□□□ -0.49
RNU4-40P-201ENST00000364351 CABLES1Q8TDN4 633 aa11.98□□□□□ -0.49
RNU4-40P-201ENST00000364351 PLEKHG3A1L390 1219 aa11.97□□□□□ -0.49
RNU4-40P-201ENST00000364351 PDE4DQ08499 809 aa11.96□□□□□ -0.49
RNU4-40P-201ENST00000364351 TRIM46Q7Z4K8 759 aa11.96□□□□□ -0.49
RNU4-40P-201ENST00000364351 PRPF38BQ5VTL8 546 aaKnown RBP11.95□□□□□ -0.5
RNU4-40P-201ENST00000364351 TSC1Q92574 1164 aa11.95□□□□□ -0.5
RNU4-40P-201ENST00000364351 MAP10Q9P2G4 905 aa11.95□□□□□ -0.5
RNU4-40P-201ENST00000364351 NUTM2BA6NNL0 878 aaPredicted RBP11.93□□□□□ -0.5
RNU4-40P-201ENST00000364351 NUTM2EB1AL46 878 aaPredicted RBP11.93□□□□□ -0.5
RNU4-40P-201ENST00000364351 NNTQ13423 1086 aa11.93□□□□□ -0.5
RNU4-40P-201ENST00000364351 NUTM2DQ5VT03 806 aaPredicted RBP11.93□□□□□ -0.5
RNU4-40P-201ENST00000364351 NUTM2AQ8IVF1 878 aaPredicted RBP11.93□□□□□ -0.5
RNU4-40P-201ENST00000364351 SLC24A3Q9HC58 644 aa11.93□□□□□ -0.5
RNU4-40P-201ENST00000364351 F12P00748 615 aaPredicted RBP11.92□□□□□ -0.5
RNU4-40P-201ENST00000364351 MYSM1Q5VVJ2 828 aa11.92□□□□□ -0.5
RNU4-40P-201ENST00000364351 MPNDQ8N594 471 aa11.92□□□□□ -0.5
RNU4-40P-201ENST00000364351 FAM174AQ8TBP5 190 aa11.92□□□□□ -0.5
RNU4-40P-201ENST00000364351 FOXJ1Q92949 421 aa11.92□□□□□ -0.5
RNU4-40P-201ENST00000364351 LIMD1Q9UGP4 676 aa11.92□□□□□ -0.5
RNU4-40P-201ENST00000364351 PER1O15534 1290 aaPredicted RBP11.91□□□□□ -0.5
RNU4-40P-201ENST00000364351 ARID5BQ14865 1188 aa11.9□□□□□ -0.5
RNU4-40P-201ENST00000364351 AGERQ15109 404 aa11.9□□□□□ -0.5
RNU4-40P-201ENST00000364351 QPCTQ16769 361 aa11.9□□□□□ -0.5
RNU4-40P-201ENST00000364351 LCE2CQ5TA81 110 aa11.9□□□□□ -0.5
RNU4-40P-201ENST00000364351 WIPF1O43516 503 aa11.89□□□□□ -0.51
RNU4-40P-201ENST00000364351 WDR4P57081 412 aaKnown RBP11.88□□□□□ -0.51
RNU4-40P-201ENST00000364351 ZFP42Q96MM3 310 aa11.88□□□□□ -0.51
RNU4-40P-201ENST00000364351 INSM1Q01101 510 aaPredicted RBP11.87□□□□□ -0.51
RNU4-40P-201ENST00000364351 SLC16A10Q8TF71 515 aa11.87□□□□□ -0.51
RNU4-40P-201ENST00000364351 NXF1Q9UBU9 619 aaKnown RBP11.87□□□□□ -0.51
RNU4-40P-201ENST00000364351 LILRB3O75022 631 aa11.86□□□□□ -0.51
RNU4-40P-201ENST00000364351 ADH1CP00326 375 aa11.85□□□□□ -0.51
RNU4-40P-201ENST00000364351 TIMP2P16035 220 aa11.85□□□□□ -0.51
RNU4-40P-201ENST00000364351 TUSC1Q2TAM9 212 aa11.84□□□□□ -0.51
RNU4-40P-201ENST00000364351 C4orf48Q5BLP8 95 aa11.84□□□□□ -0.51
RNU4-40P-201ENST00000364351 MRPL14Q6P1L8 145 aaKnown RBP11.84□□□□□ -0.51
RNU4-40P-201ENST00000364351 BPHLQ86WA6 291 aaPredicted RBP11.84□□□□□ -0.51
RNU4-40P-201ENST00000364351 CDK15Q96Q40 435 aa11.84□□□□□ -0.51
RNU4-40P-201ENST00000364351 VEGFBP49765 207 aa11.83□□□□□ -0.52
RNU4-40P-201ENST00000364351 SCARF1Q14162 830 aa11.83□□□□□ -0.52
RNU4-40P-201ENST00000364351 RTL5Q5HYW3 569 aaPredicted RBP11.83□□□□□ -0.52
RNU4-40P-201ENST00000364351 PURBQ96QR8 312 aaKnown RBP11.83□□□□□ -0.52
RNU4-40P-201ENST00000364351 HELBQ8NG08 1087 aaPredicted RBP11.82□□□□□ -0.52
RNU4-40P-201ENST00000364351 POLR3EQ9NVU0 708 aa11.82□□□□□ -0.52
RNU4-40P-201ENST00000364351 CLK2P49760 499 aaKnown RBP11.81□□□□□ -0.52
RNU4-40P-201ENST00000364351 KLF16Q9BXK1 252 aaPredicted RBP11.81□□□□□ -0.52
RNU4-40P-201ENST00000364351 STK17AQ9UEE5 414 aa11.81□□□□□ -0.52
RNU4-40P-201ENST00000364351 ZIC2O95409 532 aaPredicted RBP11.8□□□□□ -0.52
RNU4-40P-201ENST00000364351 ARMC2Q8NEN0 867 aa11.8□□□□□ -0.52
RNU4-40P-201ENST00000364351 ZFAND3Q9H8U3 227 aa11.8□□□□□ -0.52
RNU4-40P-201ENST00000364351 NR5A1Q13285 461 aa11.79□□□□□ -0.52
RNU4-40P-201ENST00000364351 RSPH6AQ9H0K4 717 aa11.79□□□□□ -0.52
RNU4-40P-201ENST00000364351 NR3C2P08235 984 aa11.78□□□□□ -0.52
RNU4-40P-201ENST00000364351 GRM5P41594 1212 aa11.78□□□□□ -0.52
RNU4-40P-201ENST00000364351 ITPKCQ96DU7 683 aa11.78□□□□□ -0.52
RNU4-40P-201ENST00000364351 NPAS3Q8IXF0 933 aa11.77□□□□□ -0.53
RNU4-40P-201ENST00000364351 IRF7Q92985 503 aa11.77□□□□□ -0.53
RNU4-40P-201ENST00000364351 SOBPA7XYQ1 873 aa11.76□□□□□ -0.53
RNU4-40P-201ENST00000364351 GMPRP36959 345 aa11.76□□□□□ -0.53
RNU4-40P-201ENST00000364351 NBPF14Q5TI25 921 aa11.76□□□□□ -0.53
RNU4-40P-201ENST00000364351 MAGEB6P1A0A0J9YX57 407 aa11.75□□□□□ -0.53
RNU4-40P-201ENST00000364351 C6orf118Q5T5N4 469 aa11.75□□□□□ -0.53
RNU4-40P-201ENST00000364351 H3BM21 787 aa11.74□□□□□ -0.53
RNU4-40P-201ENST00000364351 SH3RF1Q7Z6J0 888 aa11.74□□□□□ -0.53
RNU4-40P-201ENST00000364351 CTDSPL2Q05D32 466 aa11.73□□□□□ -0.53
RNU4-40P-201ENST00000364351 VASH1Q7L8A9 365 aaPredicted RBP11.73□□□□□ -0.53
RNU4-40P-201ENST00000364351 C1QTNF2Q9BXJ5 285 aa11.73□□□□□ -0.53
RNU4-40P-201ENST00000364351 SH3BP5LQ7L8J4 393 aa11.72□□□□□ -0.53
RNU4-40P-201ENST00000364351 CARD14Q9BXL6 1004 aa11.72□□□□□ -0.53
RNU4-40P-201ENST00000364351 FSHRP23945 695 aa11.71□□□□□ -0.53
RNU4-40P-201ENST00000364351 ATP1B4Q9UN42 357 aaPredicted RBP11.71□□□□□ -0.53
RNU4-40P-201ENST00000364351 ERBB4Q15303 1308 aa11.7□□□□□ -0.54
RNU4-40P-201ENST00000364351 UPP2O95045 317 aa11.7□□□□□ -0.54
RNU4-40P-201ENST00000364351 BMP2P12643 396 aa11.7□□□□□ -0.54
RNU4-40P-201ENST00000364351 MAN1A2O60476 641 aa11.69□□□□□ -0.54
RNU4-40P-201ENST00000364351 TRMT44Q8IYL2 757 aaKnown RBP11.68□□□□□ -0.54
RNU4-40P-201ENST00000364351 MAP4K5Q9Y4K4 846 aa11.68□□□□□ -0.54
RNU4-40P-201ENST00000364351 LINC00528Q8N1L1 170 aa11.67□□□□□ -0.54
RNU4-40P-201ENST00000364351 LRRN4Q8WUT4 740 aa11.67□□□□□ -0.54
RNU4-40P-201ENST00000364351 GPKOWQ92917 476 aaPredicted RBP eCLIP11.67□□□□□ -0.54
RNU4-40P-201ENST00000364351 SKIV2LQ15477 1246 aaKnown RBP11.66□□□□□ -0.54
RNU4-40P-201ENST00000364351 ERFEQ4G0M1 354 aa11.66□□□□□ -0.54
RNU4-40P-201ENST00000364351 MEIOBQ8N635 442 aa11.66□□□□□ -0.54
RNU4-40P-201ENST00000364351 ZSCAN1Q8NBB4 408 aa11.66□□□□□ -0.54
RNU4-40P-201ENST00000364351 GPBP1L1Q9HC44 474 aaPredicted RBP11.66□□□□□ -0.54
RNU4-40P-201ENST00000364351 CCDC116Q8IYX3 515 aa11.65□□□□□ -0.54
RNU4-40P-201ENST00000364351 PROCA1Q8NCQ7 364 aaPredicted RBP11.65□□□□□ -0.54
RNU4-40P-201ENST00000364351 EMILIN1Q9Y6C2 1016 aa11.65□□□□□ -0.54
RNU4-40P-201ENST00000364351 FAM181BA6NEQ2 426 aa11.64□□□□□ -0.55
RNU4-40P-201ENST00000364351 FBXO31Q5XUX0 539 aaPredicted RBP11.64□□□□□ -0.55
RNU4-40P-201ENST00000364351 ARHGAP9Q9BRR9 750 aa11.64□□□□□ -0.55
RNU4-40P-201ENST00000364351 KDM4CQ9H3R0 1056 aa11.64□□□□□ -0.55
RNU4-40P-201ENST00000364351 PDXDC2PQ6P474 469 aa11.63□□□□□ -0.55
RNU4-40P-201ENST00000364351 FAM117AQ9C073 453 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms