RNA–Protein interactions for RNA: ENST00000358543.8

ALKAL1-201, Transcript of ALK and LTK ligand 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALKAL1, Length 1,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKAL1-201ENST00000358543 KTN1Q86UP2 1357 aaKnown RBP33.73■■■□□ 2.99
ALKAL1-201ENST00000358543 COL22A1Q8NFW1 1626 aaPredicted RBP33.71■■■□□ 2.99
ALKAL1-201ENST00000358543 A0A1W2PP64 1363 aa33.71■■■□□ 2.99
ALKAL1-201ENST00000358543 ANKRD36BQ8N2N9 1353 aa33.71■■■□□ 2.99
ALKAL1-201ENST00000358543 ALS2Q96Q42 1657 aa33.71■■■□□ 2.99
ALKAL1-201ENST00000358543 LMOD2Q6P5Q4 547 aa33.69■■■□□ 2.98
ALKAL1-201ENST00000358543 POLR3GLQ9BT43 218 aa33.69■■■□□ 2.98
ALKAL1-201ENST00000358543 KIF7Q2M1P5 1343 aa33.69■■■□□ 2.98
ALKAL1-201ENST00000358543 TTC21BQ7Z4L5 1316 aa33.68■■■□□ 2.98
ALKAL1-201ENST00000358543 MON2Q7Z3U7 1717 aa33.67■■■□□ 2.98
ALKAL1-201ENST00000358543 MYOM1P52179 1685 aa33.67■■■□□ 2.98
ALKAL1-201ENST00000358543 ABTB2Q8N961 1025 aa33.66■■■□□ 2.98
ALKAL1-201ENST00000358543 TTC21AQ8NDW8 1320 aa33.66■■■□□ 2.98
ALKAL1-201ENST00000358543 EDC4Q6P2E9 1401 aaKnown RBP33.64■■■□□ 2.98
ALKAL1-201ENST00000358543 NRKQ7Z2Y5 1582 aa33.63■■■□□ 2.97
ALKAL1-201ENST00000358543 CCDC7Q96M83 1385 aa33.6■■■□□ 2.97
ALKAL1-201ENST00000358543 WASHC2AQ641Q2 1341 aa33.6■■■□□ 2.97
ALKAL1-201ENST00000358543 NUTM2BA6NNL0 878 aaPredicted RBP33.59■■■□□ 2.97
ALKAL1-201ENST00000358543 NUTM2EB1AL46 878 aaPredicted RBP33.59■■■□□ 2.97
ALKAL1-201ENST00000358543 NLRP13Q86W25 1043 aa33.59■■■□□ 2.97
ALKAL1-201ENST00000358543 NUTM2AQ8IVF1 878 aaPredicted RBP33.59■■■□□ 2.97
ALKAL1-201ENST00000358543 MED1Q15648 1581 aaPredicted RBP33.58■■■□□ 2.97
ALKAL1-201ENST00000358543 LRP6O75581 1613 aa33.57■■■□□ 2.97
ALKAL1-201ENST00000358543 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.57■■■□□ 2.96
ALKAL1-201ENST00000358543 CABLES1Q8TDN4 633 aa33.56■■■□□ 2.96
ALKAL1-201ENST00000358543 NLRP6P59044 892 aa33.55■■■□□ 2.96
ALKAL1-201ENST00000358543 NUTM2GQ5VZR2 741 aa33.55■■■□□ 2.96
ALKAL1-201ENST00000358543 CARD14Q9BXL6 1004 aa33.55■■■□□ 2.96
ALKAL1-201ENST00000358543 PIK3C2AO00443 1686 aa33.54■■■□□ 2.96
ALKAL1-201ENST00000358543 USP19O94966 1318 aa33.53■■■□□ 2.96
ALKAL1-201ENST00000358543 USP31Q70CQ4 1352 aa33.53■■■□□ 2.96
ALKAL1-201ENST00000358543 PANK3Q9H999 370 aa33.53■■■□□ 2.96
ALKAL1-201ENST00000358543 HAP1P54257 671 aaPredicted RBP33.51■■■□□ 2.95
ALKAL1-201ENST00000358543 NME9Q86XW9 330 aa33.5■■■□□ 2.95
ALKAL1-201ENST00000358543 CRYBG1Q9Y4K1 1723 aa33.5■■■□□ 2.95
ALKAL1-201ENST00000358543 ADAMTS2O95450 1211 aa33.49■■■□□ 2.95
ALKAL1-201ENST00000358543 MEX3CQ5U5Q3 659 aaKnown RBP33.49■■■□□ 2.95
ALKAL1-201ENST00000358543 ABCA3Q99758 1704 aa33.48■■■□□ 2.95
ALKAL1-201ENST00000358543 NSD3Q9BZ95 1437 aa33.47■■■□□ 2.95
ALKAL1-201ENST00000358543 PLEKHG5O94827 1062 aa33.47■■■□□ 2.95
ALKAL1-201ENST00000358543 FYB1O15117 783 aa33.45■■■□□ 2.95
ALKAL1-201ENST00000358543 GCP02774 474 aa33.45■■■□□ 2.95
ALKAL1-201ENST00000358543 USP54Q70EL1 1684 aa33.45■■■□□ 2.94
ALKAL1-201ENST00000358543 ZRANB1Q9UGI0 708 aa33.44■■■□□ 2.94
ALKAL1-201ENST00000358543 SLIT3O75094 1523 aa33.43■■■□□ 2.94
ALKAL1-201ENST00000358543 PHRF1Q9P1Y6 1649 aaKnown RBP33.43■■■□□ 2.94
ALKAL1-201ENST00000358543 KCNH5Q8NCM2 988 aa33.43■■■□□ 2.94
ALKAL1-201ENST00000358543 MARF1Q9Y4F3 1742 aaKnown RBP33.42■■■□□ 2.94
ALKAL1-201ENST00000358543 C8orf37Q96NL8 207 aa33.41■■■□□ 2.94
ALKAL1-201ENST00000358543 CGNL1Q0VF96 1302 aa33.41■■■□□ 2.94
ALKAL1-201ENST00000358543 OVOS2A0A0J9YW53 1432 aa33.41■■■□□ 2.94
ALKAL1-201ENST00000358543 OVOS2Q6IE36 1432 aa33.41■■■□□ 2.94
ALKAL1-201ENST00000358543 COG3Q96JB2 828 aa33.4■■■□□ 2.94
ALKAL1-201ENST00000358543 NGLY1Q96IV0 654 aa33.39■■■□□ 2.94
ALKAL1-201ENST00000358543 CPDO75976 1380 aa33.37■■■□□ 2.93
ALKAL1-201ENST00000358543 PER1O15534 1290 aaPredicted RBP33.37■■■□□ 2.93
ALKAL1-201ENST00000358543 FNBP4Q8N3X1 1017 aaPredicted RBP33.37■■■□□ 2.93
ALKAL1-201ENST00000358543 KNSTRNQ9Y448 316 aa33.37■■■□□ 2.93
ALKAL1-201ENST00000358543 FAM83GA6ND36 823 aa33.36■■■□□ 2.93
ALKAL1-201ENST00000358543 PHF23Q9BUL5 403 aaPredicted RBP33.36■■■□□ 2.93
ALKAL1-201ENST00000358543 GGNBP2Q9H3C7 697 aa33.36■■■□□ 2.93
ALKAL1-201ENST00000358543 ZC3H6P61129 1189 aaKnown RBP33.35■■■□□ 2.93
ALKAL1-201ENST00000358543 KIAA0232Q92628 1395 aa33.34■■■□□ 2.93
ALKAL1-201ENST00000358543 KIF20BQ96Q89 1820 aa33.34■■■□□ 2.93
ALKAL1-201ENST00000358543 PRDM11Q9NQV5 511 aa33.33■■■□□ 2.93
ALKAL1-201ENST00000358543 AFF2P51816 1311 aa33.32■■■□□ 2.93
ALKAL1-201ENST00000358543 NSD2O96028 1365 aa33.31■■■□□ 2.92
ALKAL1-201ENST00000358543 SLIT2O94813 1529 aa33.3■■■□□ 2.92
ALKAL1-201ENST00000358543 NFAT5O94916 1531 aa33.3■■■□□ 2.92
ALKAL1-201ENST00000358543 ZNF772Q68DY9 489 aaPredicted RBP33.3■■■□□ 2.92
ALKAL1-201ENST00000358543 RGS17Q9UGC6 210 aaPredicted RBP33.3■■■□□ 2.92
ALKAL1-201ENST00000358543 ARHGEF25Q86VW2 580 aa33.29■■■□□ 2.92
ALKAL1-201ENST00000358543 COL14A1Q05707 1796 aaKnown RBP33.29■■■□□ 2.92
ALKAL1-201ENST00000358543 AMER1Q5JTC6 1135 aaPredicted RBP33.28■■■□□ 2.92
ALKAL1-201ENST00000358543 SOX12O15370 315 aa33.27■■■□□ 2.92
ALKAL1-201ENST00000358543 USP21Q9UK80 565 aa33.27■■■□□ 2.92
ALKAL1-201ENST00000358543 ZNF316A6NFI3 1004 aaPredicted RBP33.25■■■□□ 2.91
ALKAL1-201ENST00000358543 BCL9LQ86UU0 1499 aa33.25■■■□□ 2.91
ALKAL1-201ENST00000358543 AATKQ6ZMQ8 1374 aa33.24■■■□□ 2.91
ALKAL1-201ENST00000358543 CHRNA2Q15822 529 aa33.24■■■□□ 2.91
ALKAL1-201ENST00000358543 UNC5CLQ8IV45 518 aa33.24■■■□□ 2.91
ALKAL1-201ENST00000358543 BTG4Q9NY30 223 aa33.23■■■□□ 2.91
ALKAL1-201ENST00000358543 NPC1L1Q9UHC9 1359 aa33.22■■■□□ 2.91
ALKAL1-201ENST00000358543 NWD2Q9ULI1 1742 aa33.22■■■□□ 2.91
ALKAL1-201ENST00000358543 PLCH1Q4KWH8 1693 aa33.21■■■□□ 2.91
ALKAL1-201ENST00000358543 ANKRD26Q9UPS8 1709 aa33.19■■■□□ 2.9
ALKAL1-201ENST00000358543 LMO7Q8WWI1 1683 aa33.18■■■□□ 2.9
ALKAL1-201ENST00000358543 ABCC6O95255 1503 aa33.18■■■□□ 2.9
ALKAL1-201ENST00000358543 TNKS1BP1Q9C0C2 1729 aaKnown RBP33.17■■■□□ 2.9
ALKAL1-201ENST00000358543 ZBTB7CA1YPR0 619 aa33.17■■■□□ 2.9
ALKAL1-201ENST00000358543 TRPC5Q9UL62 973 aaPredicted RBP33.17■■■□□ 2.9
ALKAL1-201ENST00000358543 COL18A1P39060 1754 aa33.16■■■□□ 2.9
ALKAL1-201ENST00000358543 FBLN1P23142 703 aa33.16■■■□□ 2.9
ALKAL1-201ENST00000358543 DDX10Q13206 875 aaKnown RBP33.16■■■□□ 2.9
ALKAL1-201ENST00000358543 QTRT2Q9H974 415 aaKnown RBP33.16■■■□□ 2.9
ALKAL1-201ENST00000358543 CAMTA1Q9Y6Y1 1673 aa33.16■■■□□ 2.9
ALKAL1-201ENST00000358543 POTEAQ6S8J7 498 aa33.15■■■□□ 2.9
ALKAL1-201ENST00000358543 MORC1Q86VD1 984 aa33.15■■■□□ 2.9
ALKAL1-201ENST00000358543 MAP3K19Q56UN5 1328 aa33.14■■■□□ 2.9
ALKAL1-201ENST00000358543 AXIN2Q9Y2T1 843 aa33.14■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms