RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 UTP14CQ5TAP6 766 aaKnown RBP13.99□□□□□ -0.17
CNOT3-202ENST00000358389 MYRIPQ8NFW9 859 aa13.98□□□□□ -0.17
CNOT3-202ENST00000358389 CYB5RLQ6IPT4 315 aa13.98□□□□□ -0.17
CNOT3-202ENST00000358389 ZGPATQ8N5A5 531 aaKnown RBP13.98□□□□□ -0.17
CNOT3-202ENST00000358389 GTPBP4Q9BZE4 634 aaKnown RBP13.98□□□□□ -0.17
CNOT3-202ENST00000358389 DNMBPQ6XZF7 1577 aa13.98□□□□□ -0.17
CNOT3-202ENST00000358389 CDC45O75419 566 aa13.98□□□□□ -0.17
CNOT3-202ENST00000358389 RABEP1Q15276 862 aa13.98□□□□□ -0.17
CNOT3-202ENST00000358389 PIK3C2GO75747 1445 aa13.97□□□□□ -0.17
CNOT3-202ENST00000358389 KIF3BO15066 747 aa13.97□□□□□ -0.17
CNOT3-202ENST00000358389 PLCD3Q8N3E9 789 aa13.97□□□□□ -0.17
CNOT3-202ENST00000358389 SYAP1Q96A49 352 aaPredicted RBP13.97□□□□□ -0.17
CNOT3-202ENST00000358389 TMEM63CQ9P1W3 806 aa13.97□□□□□ -0.17
CNOT3-202ENST00000358389 NUCB1Q02818 461 aa13.97□□□□□ -0.17
CNOT3-202ENST00000358389 BMP2KLQ5H9B9 411 aa13.97□□□□□ -0.17
CNOT3-202ENST00000358389 LMOD2Q6P5Q4 547 aa13.97□□□□□ -0.17
CNOT3-202ENST00000358389 USP25Q9UHP3 1055 aa13.97□□□□□ -0.17
CNOT3-202ENST00000358389 TAOK2Q9UL54 1235 aa13.97□□□□□ -0.17
CNOT3-202ENST00000358389 TROQ12816 1431 aaPredicted RBP13.97□□□□□ -0.17
CNOT3-202ENST00000358389 ELL2O00472 640 aaPredicted RBP13.97□□□□□ -0.17
CNOT3-202ENST00000358389 NOLC1Q14978 699 aaKnown RBP eCLIP13.96□□□□□ -0.17
CNOT3-202ENST00000358389 NAP1L2Q9ULW6 460 aaPredicted RBP13.96□□□□□ -0.17
CNOT3-202ENST00000358389 GPT2Q8TD30 523 aa13.96□□□□□ -0.17
CNOT3-202ENST00000358389 ZMYM3Q14202 1370 aa13.96□□□□□ -0.17
CNOT3-202ENST00000358389 LETM1O95202 739 aaPredicted RBP13.96□□□□□ -0.17
CNOT3-202ENST00000358389 ATP2B3Q16720 1220 aa13.96□□□□□ -0.17
CNOT3-202ENST00000358389 CASC1Q6TDU7 716 aa13.96□□□□□ -0.17
CNOT3-202ENST00000358389 OSCARQ8IYS5 282 aa13.96□□□□□ -0.17
CNOT3-202ENST00000358389 PDLIM2Q96JY6 352 aa13.96□□□□□ -0.17
CNOT3-202ENST00000358389 KIF20AO95235 890 aa13.96□□□□□ -0.18
CNOT3-202ENST00000358389 RTEL1-TNFRSF6BF6WH68 1400 aa13.95□□□□□ -0.18
CNOT3-202ENST00000358389 ASXL1Q8IXJ9 1541 aa13.95□□□□□ -0.18
CNOT3-202ENST00000358389 GPATCH8Q9UKJ3 1502 aaKnown RBP13.95□□□□□ -0.18
CNOT3-202ENST00000358389 GDPD2Q9HCC8 539 aa13.95□□□□□ -0.18
CNOT3-202ENST00000358389 U2AF2P26368 475 aaKnown RBP eCLIP13.95□□□□□ -0.183e-6■■■■□ 20.1
CNOT3-202ENST00000358389 HAP1P54257 671 aaPredicted RBP13.95□□□□□ -0.18
CNOT3-202ENST00000358389 KIF2CQ99661 725 aa13.95□□□□□ -0.18
CNOT3-202ENST00000358389 KANK1Q14678 1352 aa13.94□□□□□ -0.18
CNOT3-202ENST00000358389 CARD14Q9BXL6 1004 aa13.94□□□□□ -0.18
CNOT3-202ENST00000358389 GPRASP1Q5JY77 1395 aa13.94□□□□□ -0.18
CNOT3-202ENST00000358389 PRIMPOLQ96LW4 560 aa13.94□□□□□ -0.18
CNOT3-202ENST00000358389 MBD3O95983 291 aa13.94□□□□□ -0.18
CNOT3-202ENST00000358389 NSFL1CQ9UNZ2 370 aaKnown RBP13.94□□□□□ -0.18
CNOT3-202ENST00000358389 E9PCH4 1651 aa13.93□□□□□ -0.18
CNOT3-202ENST00000358389 TRAK1Q9UPV9 953 aa13.93□□□□□ -0.18
CNOT3-202ENST00000358389 A2MP01023 1474 aa13.93□□□□□ -0.18
CNOT3-202ENST00000358389 SPC24Q8NBT2 197 aa13.93□□□□□ -0.18
CNOT3-202ENST00000358389 IBTKQ9P2D0 1353 aaPredicted RBP13.93□□□□□ -0.18
CNOT3-202ENST00000358389 WDR7Q9Y4E6 1490 aa13.92□□□□□ -0.18
CNOT3-202ENST00000358389 NCOA3Q9Y6Q9 1424 aa13.92□□□□□ -0.18
CNOT3-202ENST00000358389 GTF2E1P29083 439 aaPredicted RBP13.92□□□□□ -0.18
CNOT3-202ENST00000358389 SLC12A5Q9H2X9 1139 aa13.92□□□□□ -0.18
CNOT3-202ENST00000358389 BCL2L12Q9HB09 334 aa13.92□□□□□ -0.18
CNOT3-202ENST00000358389 CWC22Q9HCG8 908 aaKnown RBP13.92□□□□□ -0.18
CNOT3-202ENST00000358389 WDR62O43379 1518 aa13.92□□□□□ -0.18
CNOT3-202ENST00000358389 STAC3Q96MF2 364 aa13.92□□□□□ -0.18
CNOT3-202ENST00000358389 DIAPH3Q9NSV4 1193 aa13.92□□□□□ -0.18
CNOT3-202ENST00000358389 ZBTB40Q9NUA8 1239 aa13.92□□□□□ -0.18
CNOT3-202ENST00000358389 ZBTB22O15209 634 aa13.91□□□□□ -0.18
CNOT3-202ENST00000358389 PHF14O94880 888 aa13.91□□□□□ -0.18
CNOT3-202ENST00000358389 CFAP70Q5T0N1 1121 aa13.91□□□□□ -0.18
CNOT3-202ENST00000358389 HDGFP51858 240 aaKnown RBP13.9□□□□□ -0.18
CNOT3-202ENST00000358389 NEK4P51957 841 aa13.9□□□□□ -0.18
CNOT3-202ENST00000358389 ADCY5O95622 1261 aa13.9□□□□□ -0.18
CNOT3-202ENST00000358389 DRC7Q8IY82 874 aa13.9□□□□□ -0.18
CNOT3-202ENST00000358389 ZNF710Q8N1W2 664 aa13.9□□□□□ -0.18
CNOT3-202ENST00000358389 NUP153P49790 1475 aaKnown RBP13.9□□□□□ -0.18
CNOT3-202ENST00000358389 IQGAP2Q13576 1575 aa13.89□□□□□ -0.19
CNOT3-202ENST00000358389 KCNJ4P48050 445 aa13.89□□□□□ -0.19
CNOT3-202ENST00000358389 GCC1Q96CN9 775 aa13.89□□□□□ -0.19
CNOT3-202ENST00000358389 INTS3Q68E01 1043 aaKnown RBP13.88□□□□□ -0.19
CNOT3-202ENST00000358389 PIBF1Q8WXW3 757 aa13.88□□□□□ -0.19
CNOT3-202ENST00000358389 ERICH4A6NGS2 130 aa13.88□□□□□ -0.19
CNOT3-202ENST00000358389 ZNF592Q92610 1267 aa13.88□□□□□ -0.19
CNOT3-202ENST00000358389 ADGRL2O95490 1459 aa13.87□□□□□ -0.19
CNOT3-202ENST00000358389 VIRMAQ69YN4 1812 aaKnown RBP13.87□□□□□ -0.19
CNOT3-202ENST00000358389 HCLS1P14317 486 aaPredicted RBP13.87□□□□□ -0.19
CNOT3-202ENST00000358389 TRERF1Q96PN7 1200 aa13.87□□□□□ -0.19
CNOT3-202ENST00000358389 PTPRGP23470 1445 aa13.87□□□□□ -0.19
CNOT3-202ENST00000358389 NUTM2FA1L443 756 aa13.87□□□□□ -0.19
CNOT3-202ENST00000358389 ABCC2Q92887 1545 aa13.86□□□□□ -0.19
CNOT3-202ENST00000358389 KDM5DQ9BY66 1539 aa13.86□□□□□ -0.19
CNOT3-202ENST00000358389 RIOK3O14730 519 aaKnown RBP13.86□□□□□ -0.19
CNOT3-202ENST00000358389 PDIA4P13667 645 aaKnown RBP13.86□□□□□ -0.19
CNOT3-202ENST00000358389 LAMC3Q9Y6N6 1575 aa13.85□□□□□ -0.19
CNOT3-202ENST00000358389 FAM135AQ9P2D6 1515 aa13.85□□□□□ -0.19
CNOT3-202ENST00000358389 SPAG9O60271 1321 aaKnown RBP13.85□□□□□ -0.19
CNOT3-202ENST00000358389 OS9Q13438 667 aaPredicted RBP13.85□□□□□ -0.19
CNOT3-202ENST00000358389 C16orf71Q8IYS4 520 aaPredicted RBP13.85□□□□□ -0.19
CNOT3-202ENST00000358389 AK9Q5TCS8 1911 aa13.85□□□□□ -0.19
CNOT3-202ENST00000358389 TAF3Q5VWG9 929 aa13.84□□□□□ -0.19
CNOT3-202ENST00000358389 CLEC17AQ6ZS10 378 aa13.84□□□□□ -0.19
CNOT3-202ENST00000358389 CHMP4AQ9BY43 222 aa13.84□□□□□ -0.19
CNOT3-202ENST00000358389 IFT57Q9NWB7 429 aa13.84□□□□□ -0.19
CNOT3-202ENST00000358389 CHMP3Q9Y3E7 222 aa13.84□□□□□ -0.19
CNOT3-202ENST00000358389 REC8O95072 547 aa13.84□□□□□ -0.19
CNOT3-202ENST00000358389 CT47B1P0C2W7 299 aaPredicted RBP13.84□□□□□ -0.19
CNOT3-202ENST00000358389 TMPOP42166 694 aaKnown RBP13.84□□□□□ -0.19
CNOT3-202ENST00000358389 CFAP44Q96MT7 982 aa13.84□□□□□ -0.19
CNOT3-202ENST00000358389 POLR3AO14802 1390 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms