RNA–Protein interactions for RNA: ENST00000357490.6

COPS7B-202, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 4

Gene COPS7B, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-202ENST00000357490 ATP7BP35670 1465 aa22.56■■□□□ 1.2
COPS7B-202ENST00000357490 TRPM3Q9HCF6 1732 aaPredicted RBP22.55■■□□□ 1.2
COPS7B-202ENST00000357490 NWD2Q9ULI1 1742 aa22.55■■□□□ 1.2
COPS7B-202ENST00000357490 HAP1P54257 671 aaPredicted RBP22.55■■□□□ 1.2
COPS7B-202ENST00000357490 PMFBP1Q8TBY8 1022 aa22.55■■□□□ 1.2
COPS7B-202ENST00000357490 ATAD2Q6PL18 1390 aa22.54■■□□□ 1.2
COPS7B-202ENST00000357490 SLIT2O94813 1529 aa22.54■■□□□ 1.2
COPS7B-202ENST00000357490 PLCH1Q4KWH8 1693 aa22.54■■□□□ 1.2
COPS7B-202ENST00000357490 CCDC61Q9Y6R9 512 aa22.53■■□□□ 1.2
COPS7B-202ENST00000357490 ALS2Q96Q42 1657 aa22.52■■□□□ 1.2
COPS7B-202ENST00000357490 LMOD2Q6P5Q4 547 aa22.52■■□□□ 1.2
COPS7B-202ENST00000357490 ZEB1P37275 1124 aaPredicted RBP22.51■■□□□ 1.19
COPS7B-202ENST00000357490 UNC5CLQ8IV45 518 aa22.51■■□□□ 1.19
COPS7B-202ENST00000357490 GJD4Q96KN9 370 aaPredicted RBP22.51■■□□□ 1.19
COPS7B-202ENST00000357490 EP400Q96L91 3159 aa22.51■■□□□ 1.19
COPS7B-202ENST00000357490 SLC24A1O60721 1099 aa22.5■■□□□ 1.19
COPS7B-202ENST00000357490 TMF1P82094 1093 aa22.5■■□□□ 1.19
COPS7B-202ENST00000357490 TOPAZ1Q8N9V7 1692 aa22.49■■□□□ 1.19
COPS7B-202ENST00000357490 CABP1Q9NZU7 370 aa22.48■■□□□ 1.19
COPS7B-202ENST00000357490 PPIP5K1Q6PFW1 1433 aa22.48■■□□□ 1.19
COPS7B-202ENST00000357490 PLEKHG3A1L390 1219 aa22.47■■□□□ 1.19
COPS7B-202ENST00000357490 CABLES1Q8TDN4 633 aa22.47■■□□□ 1.19
COPS7B-202ENST00000357490 GLI3P10071 1580 aa22.46■■□□□ 1.19
COPS7B-202ENST00000357490 NGDNQ8NEJ9 315 aaKnown RBP22.46■■□□□ 1.19
COPS7B-202ENST00000357490 PUS7Q96PZ0 661 aaKnown RBP22.46■■□□□ 1.19
COPS7B-202ENST00000357490 BRWD3Q6RI45 1802 aa22.45■■□□□ 1.18
COPS7B-202ENST00000357490 PLEKHG5O94827 1062 aa22.44■■□□□ 1.18
COPS7B-202ENST00000357490 ACEP12821 1306 aa22.44■■□□□ 1.18
COPS7B-202ENST00000357490 CRYBG1Q9Y4K1 1723 aa22.44■■□□□ 1.18
COPS7B-202ENST00000357490 COL14A1Q05707 1796 aaKnown RBP22.43■■□□□ 1.18
COPS7B-202ENST00000357490 POLR3AO14802 1390 aaPredicted RBP22.42■■□□□ 1.18
COPS7B-202ENST00000357490 NRAPQ86VF7 1730 aa22.41■■□□□ 1.18
COPS7B-202ENST00000357490 C11orf95C9JLR9 678 aaPredicted RBP22.41■■□□□ 1.18
COPS7B-202ENST00000357490 VPS72Q15906 364 aa22.41■■□□□ 1.18
COPS7B-202ENST00000357490 TMC1Q8TDI8 760 aa22.41■■□□□ 1.18
COPS7B-202ENST00000357490 SLC12A5Q9H2X9 1139 aa22.41■■□□□ 1.18
COPS7B-202ENST00000357490 CDCA8Q53HL2 280 aa22.4■■□□□ 1.18
COPS7B-202ENST00000357490 PAK3O75914 559 aaPredicted RBP22.39■■□□□ 1.17
COPS7B-202ENST00000357490 CCDC125Q86Z20 511 aa22.39■■□□□ 1.17
COPS7B-202ENST00000357490 FAM83GA6ND36 823 aa22.37■■□□□ 1.17
COPS7B-202ENST00000357490 POLR3GLQ9BT43 218 aa22.37■■□□□ 1.17
COPS7B-202ENST00000357490 CCDC9Q9Y3X0 531 aaKnown RBP22.37■■□□□ 1.17
COPS7B-202ENST00000357490 PHRF1Q9P1Y6 1649 aaKnown RBP22.35■■□□□ 1.17
COPS7B-202ENST00000357490 CD163L1Q9NR16 1453 aa22.34■■□□□ 1.17
COPS7B-202ENST00000357490 CPSF1Q10570 1443 aaKnown RBP22.34■■□□□ 1.17
COPS7B-202ENST00000357490 AKAP12Q02952 1782 aa22.33■■□□□ 1.17
COPS7B-202ENST00000357490 SEPT12Q8IYM1 358 aa22.33■■□□□ 1.17
COPS7B-202ENST00000357490 ZNF692Q9BU19 519 aaPredicted RBP22.33■■□□□ 1.17
COPS7B-202ENST00000357490 BTG4Q9NY30 223 aa22.33■■□□□ 1.17
COPS7B-202ENST00000357490 USP6P35125 1406 aa22.32■■□□□ 1.16
COPS7B-202ENST00000357490 ONECUT3O60422 494 aaPredicted RBP22.32■■□□□ 1.16
COPS7B-202ENST00000357490 NINLQ9Y2I6 1382 aa22.32■■□□□ 1.16
COPS7B-202ENST00000357490 TERF2IPQ9NYB0 399 aa22.31■■□□□ 1.16
COPS7B-202ENST00000357490 KIF7Q2M1P5 1343 aa22.31■■□□□ 1.16
COPS7B-202ENST00000357490 A0A1W2PP64 1363 aa22.3■■□□□ 1.16
COPS7B-202ENST00000357490 KTN1Q86UP2 1357 aaKnown RBP22.3■■□□□ 1.16
COPS7B-202ENST00000357490 HDGFL2Q7Z4V5 671 aaPredicted RBP22.3■■□□□ 1.16
COPS7B-202ENST00000357490 MYOM1P52179 1685 aa22.3■■□□□ 1.16
COPS7B-202ENST00000357490 PRDM11Q9NQV5 511 aa22.29■■□□□ 1.16
COPS7B-202ENST00000357490 BLMP54132 1417 aaPredicted RBP22.29■■□□□ 1.16
COPS7B-202ENST00000357490 SSH2Q76I76 1423 aa22.29■■□□□ 1.16
COPS7B-202ENST00000357490 MON2Q7Z3U7 1717 aa22.27■■□□□ 1.16
COPS7B-202ENST00000357490 ANKRD36BQ8N2N9 1353 aa22.26■■□□□ 1.15
COPS7B-202ENST00000357490 NUTM2GQ5VZR2 741 aa22.26■■□□□ 1.15
COPS7B-202ENST00000357490 KRT27Q7Z3Y8 459 aa22.26■■□□□ 1.15
COPS7B-202ENST00000357490 TTC21BQ7Z4L5 1316 aa22.26■■□□□ 1.15
COPS7B-202ENST00000357490 BRD4O60885 1362 aaPredicted RBP22.25■■□□□ 1.15
COPS7B-202ENST00000357490 A0A0G2JS52 829 aa22.25■■□□□ 1.15
COPS7B-202ENST00000357490 MYT1Q01538 1121 aa22.25■■□□□ 1.15
COPS7B-202ENST00000357490 ABTB2Q8N961 1025 aa22.25■■□□□ 1.15
COPS7B-202ENST00000357490 WASHC2AQ641Q2 1341 aa22.25■■□□□ 1.15
COPS7B-202ENST00000357490 KIAA0232Q92628 1395 aa22.25■■□□□ 1.15
COPS7B-202ENST00000357490 SF3B2Q13435 895 aaKnown RBP22.24■■□□□ 1.15
COPS7B-202ENST00000357490 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.24■■□□□ 1.15
COPS7B-202ENST00000357490 ZRANB1Q9UGI0 708 aa22.24■■□□□ 1.15
COPS7B-202ENST00000357490 NRKQ7Z2Y5 1582 aa22.24■■□□□ 1.15
COPS7B-202ENST00000357490 CCDC7Q96M83 1385 aa22.24■■□□□ 1.15
COPS7B-202ENST00000357490 FAM98CQ17RN3 349 aaKnown RBP22.23■■□□□ 1.15
COPS7B-202ENST00000357490 SPATA31A5Q5VU36 1347 aa22.23■■□□□ 1.15
COPS7B-202ENST00000357490 SPATA31A7Q8IWB4 1347 aa22.23■■□□□ 1.15
COPS7B-202ENST00000357490 CARD14Q9BXL6 1004 aa22.22■■□□□ 1.15
COPS7B-202ENST00000357490 THSD7AQ9UPZ6 1657 aa22.22■■□□□ 1.15
COPS7B-202ENST00000357490 EDC4Q6P2E9 1401 aaKnown RBP22.22■■□□□ 1.15
COPS7B-202ENST00000357490 TTC21AQ8NDW8 1320 aa22.21■■□□□ 1.15
COPS7B-202ENST00000357490 PANK3Q9H999 370 aa22.2■■□□□ 1.14
COPS7B-202ENST00000357490 RGPD1P0DJD0 1748 aa22.2■■□□□ 1.14
COPS7B-202ENST00000357490 NLRP6P59044 892 aa22.19■■□□□ 1.14
COPS7B-202ENST00000357490 ZC3H6P61129 1189 aaKnown RBP22.19■■□□□ 1.14
COPS7B-202ENST00000357490 NLRP13Q86W25 1043 aa22.19■■□□□ 1.14
COPS7B-202ENST00000357490 NME9Q86XW9 330 aa22.19■■□□□ 1.14
COPS7B-202ENST00000357490 PIK3C2AO00443 1686 aa22.19■■□□□ 1.14
COPS7B-202ENST00000357490 SRCAPQ6ZRS2 3230 aa22.19■■□□□ 1.14
COPS7B-202ENST00000357490 USP19O94966 1318 aa22.18■■□□□ 1.14
COPS7B-202ENST00000357490 CHRNA2Q15822 529 aa22.18■■□□□ 1.14
COPS7B-202ENST00000357490 CPDO75976 1380 aa22.17■■□□□ 1.14
COPS7B-202ENST00000357490 LMO7Q8WWI1 1683 aa22.17■■□□□ 1.14
COPS7B-202ENST00000357490 SPATA31A1Q5TZJ5 1347 aa22.16■■□□□ 1.14
COPS7B-202ENST00000357490 STRN4Q9NRL3 753 aa22.15■■□□□ 1.14
COPS7B-202ENST00000357490 NSD3Q9BZ95 1437 aa22.14■■□□□ 1.14
COPS7B-202ENST00000357490 EVA1CP58658 441 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms