RNA–Protein interactions for RNA: ENST00000356384.4

RXRA-201, Transcript of retinoid X receptor alpha, humanhuman

TSL 5

Gene RXRA, Length 5,770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-201ENST00000356384 TBC1D2BQ9UPU7 963 aa19.2■□□□□ 0.66
RXRA-201ENST00000356384 DHX57Q6P158 1386 aaKnown RBP19.2■□□□□ 0.66
RXRA-201ENST00000356384 NLRP2Q9NX02 1062 aa19.2■□□□□ 0.66
RXRA-201ENST00000356384 PRPF40AO75400 957 aaKnown RBP19.19■□□□□ 0.66
RXRA-201ENST00000356384 CEBPZQ03701 1054 aaKnown RBP19.19■□□□□ 0.66
RXRA-201ENST00000356384 FAM177BA6PVY3 158 aa19.19■□□□□ 0.66
RXRA-201ENST00000356384 CLASRPQ8N2M8 674 aaKnown RBP19.19■□□□□ 0.66
RXRA-201ENST00000356384 NEFHP12036 1026 aa19.19■□□□□ 0.66
RXRA-201ENST00000356384 NEK4P51957 841 aa19.19■□□□□ 0.66
RXRA-201ENST00000356384 SYCP1Q15431 976 aa19.19■□□□□ 0.66
RXRA-201ENST00000356384 MTERF4Q7Z6M4 381 aaKnown RBP19.19■□□□□ 0.66
RXRA-201ENST00000356384 SURF6O75683 361 aaKnown RBP19.18■□□□□ 0.66
RXRA-201ENST00000356384 FAM69CQ0P6D2 419 aa19.18■□□□□ 0.66
RXRA-201ENST00000356384 TOP2BQ02880 1626 aa19.18■□□□□ 0.66
RXRA-201ENST00000356384 KRT18P05783 430 aaKnown RBP19.18■□□□□ 0.66
RXRA-201ENST00000356384 GGNBP2Q9H3C7 697 aa19.18■□□□□ 0.66
RXRA-201ENST00000356384 CCAR1Q8IX12 1150 aaKnown RBP19.17■□□□□ 0.66
RXRA-201ENST00000356384 SPC24Q8NBT2 197 aa19.17■□□□□ 0.66
RXRA-201ENST00000356384 FIBPO43427 364 aa19.17■□□□□ 0.66
RXRA-201ENST00000356384 TXLNAP40222 546 aa19.17■□□□□ 0.66
RXRA-201ENST00000356384 MBD3O95983 291 aa19.17■□□□□ 0.66
RXRA-201ENST00000356384 CCDC66A2RUB6 948 aa19.16■□□□□ 0.66
RXRA-201ENST00000356384 CCP110O43303 1012 aa19.16■□□□□ 0.66
RXRA-201ENST00000356384 LEKR1Q6ZMV7 388 aa19.16■□□□□ 0.66
RXRA-201ENST00000356384 STK38Q15208 465 aa19.16■□□□□ 0.66
RXRA-201ENST00000356384 MRC2Q9UBG0 1479 aa19.15■□□□□ 0.66
RXRA-201ENST00000356384 CT47B1P0C2W7 299 aaPredicted RBP19.15■□□□□ 0.66
RXRA-201ENST00000356384 ATF3P18847 181 aa19.15■□□□□ 0.66
RXRA-201ENST00000356384 OSCARQ8IYS5 282 aa19.15■□□□□ 0.66
RXRA-201ENST00000356384 KIF21BO75037 1637 aa19.15■□□□□ 0.66
RXRA-201ENST00000356384 ZNF396Q96N95 335 aaPredicted RBP19.14■□□□□ 0.66
RXRA-201ENST00000356384 TOPBP1Q92547 1522 aa19.14■□□□□ 0.66
RXRA-201ENST00000356384 PTPRGP23470 1445 aa19.14■□□□□ 0.65
RXRA-201ENST00000356384 WWC2Q6AWC2 1192 aa19.14■□□□□ 0.65
RXRA-201ENST00000356384 RBM10P98175 930 aaKnown RBP19.14■□□□□ 0.65
RXRA-201ENST00000356384 AAMPQ13685 434 aa19.13■□□□□ 0.65
RXRA-201ENST00000356384 DNAJC5BQ9UF47 199 aa19.13■□□□□ 0.65
RXRA-201ENST00000356384 ANKRD62A6NC57 917 aa19.13■□□□□ 0.65
RXRA-201ENST00000356384 PDCP20941 246 aa19.13■□□□□ 0.65
RXRA-201ENST00000356384 SERPINC1P01008 464 aa19.13■□□□□ 0.65
RXRA-201ENST00000356384 HSP90AB3PQ58FF7 597 aa19.13■□□□□ 0.65
RXRA-201ENST00000356384 GNAI3P08754 354 aa19.12■□□□□ 0.65
RXRA-201ENST00000356384 ZNHIT6Q9NWK9 470 aaKnown RBP19.12■□□□□ 0.65
RXRA-201ENST00000356384 ERLIN2O94905 339 aa19.12■□□□□ 0.65
RXRA-201ENST00000356384 SLC3A2P08195 630 aaKnown RBP19.12■□□□□ 0.65
RXRA-201ENST00000356384 PDCL3Q9H2J4 239 aa19.12■□□□□ 0.65
RXRA-201ENST00000356384 PIP4K2AP48426 406 aaPredicted RBP19.11■□□□□ 0.65
RXRA-201ENST00000356384 ZRSR2Q15696 482 aaKnown RBP19.11■□□□□ 0.65
RXRA-201ENST00000356384 CCDC30Q5VVM6 783 aa19.11■□□□□ 0.65
RXRA-201ENST00000356384 STK11IPQ8N1F8 1099 aa19.11■□□□□ 0.65
RXRA-201ENST00000356384 CABP2Q9NPB3 220 aa19.1■□□□□ 0.65
RXRA-201ENST00000356384 PPP1R1BQ9UD71 204 aaPredicted RBP19.1■□□□□ 0.65
RXRA-201ENST00000356384 GOLGA6L10A6NI86 522 aa19.1■□□□□ 0.65
RXRA-201ENST00000356384 C1orf115Q9H7X2 142 aa19.1■□□□□ 0.65
RXRA-201ENST00000356384 KIF7Q2M1P5 1343 aa19.1■□□□□ 0.65
RXRA-201ENST00000356384 HIP1O00291 1037 aa19.1■□□□□ 0.65
RXRA-201ENST00000356384 STK3Q13188 491 aa19.09■□□□□ 0.65
RXRA-201ENST00000356384 SEPT7Q16181 437 aaKnown RBP19.09■□□□□ 0.65
RXRA-201ENST00000356384 ZHX3Q9H4I2 956 aa19.09■□□□□ 0.65
RXRA-201ENST00000356384 MCM2P49736 904 aa19.09■□□□□ 0.65
RXRA-201ENST00000356384 DEF6Q9H4E7 631 aa19.09■□□□□ 0.65
RXRA-201ENST00000356384 ATP2B2Q01814 1243 aa19.09■□□□□ 0.65
RXRA-201ENST00000356384 MPNDQ8N594 471 aa19.09■□□□□ 0.65
RXRA-201ENST00000356384 POLA1P09884 1462 aaPredicted RBP19.09■□□□□ 0.65
RXRA-201ENST00000356384 GRIN2BQ13224 1484 aa19.09■□□□□ 0.65
RXRA-201ENST00000356384 HMGN5P82970 282 aaKnown RBP19.08■□□□□ 0.65
RXRA-201ENST00000356384 RABEP1Q15276 862 aa19.08■□□□□ 0.65
RXRA-201ENST00000356384 CCDC181Q5TID7 509 aa19.08■□□□□ 0.65
RXRA-201ENST00000356384 PPFIBP1Q86W92 1011 aa19.08■□□□□ 0.65
RXRA-201ENST00000356384 TTC39AQ5SRH9 613 aa19.08■□□□□ 0.65
RXRA-201ENST00000356384 PDZRN3Q9UPQ7 1066 aa19.08■□□□□ 0.65
RXRA-201ENST00000356384 BRPF3Q9ULD4 1205 aa19.08■□□□□ 0.64
RXRA-201ENST00000356384 NLRP6P59044 892 aa19.08■□□□□ 0.64
RXRA-201ENST00000356384 ENOX2Q16206 610 aaKnown RBP19.08■□□□□ 0.64
RXRA-201ENST00000356384 DHX37Q8IY37 1157 aaKnown RBP19.08■□□□□ 0.64
RXRA-201ENST00000356384 TANGO6Q9C0B7 1094 aa19.08■□□□□ 0.64
RXRA-201ENST00000356384 KIF6Q6ZMV9 814 aa19.07■□□□□ 0.64
RXRA-201ENST00000356384 JMYQ8N9B5 988 aa19.07■□□□□ 0.64
RXRA-201ENST00000356384 ADAMTS8Q9UP79 889 aa19.07■□□□□ 0.64
RXRA-201ENST00000356384 FAM177A1Q8N128 213 aaPredicted RBP19.06■□□□□ 0.64
RXRA-201ENST00000356384 ZNF428Q96B54 188 aa19.06■□□□□ 0.64
RXRA-201ENST00000356384 RBM42Q9BTD8 480 aaKnown RBP19.06■□□□□ 0.64
RXRA-201ENST00000356384 KIAA0754O94854 1291 aa19.06■□□□□ 0.64
RXRA-201ENST00000356384 CENPHQ9H3R5 247 aa19.06■□□□□ 0.64
RXRA-201ENST00000356384 CNNM1Q9NRU3 951 aa19.06■□□□□ 0.64
RXRA-201ENST00000356384 PRDM2Q13029 1718 aa19.05■□□□□ 0.64
RXRA-201ENST00000356384 ERICH3Q5RHP9 1530 aa19.05■□□□□ 0.64
RXRA-201ENST00000356384 CCDC192P0DO97 292 aa19.05■□□□□ 0.64
RXRA-201ENST00000356384 ME1P48163 572 aa19.05■□□□□ 0.64
RXRA-201ENST00000356384 CCDC158Q5M9N0 1113 aa19.05■□□□□ 0.64
RXRA-201ENST00000356384 TNMDQ9H2S6 317 aa19.05■□□□□ 0.64
RXRA-201ENST00000356384 TAX1BP1Q86VP1 789 aa19.05■□□□□ 0.64
RXRA-201ENST00000356384 MIA2Q96PC5 1412 aa19.05■□□□□ 0.64
RXRA-201ENST00000356384 MTHFSP49914 203 aa19.05■□□□□ 0.64
RXRA-201ENST00000356384 TMEM132EQ6IEE7 984 aa19.05■□□□□ 0.64
RXRA-201ENST00000356384 TCP11L2Q8N4U5 519 aa19.04■□□□□ 0.64
RXRA-201ENST00000356384 ERC1Q8IUD2 1116 aa19.04■□□□□ 0.64
RXRA-201ENST00000356384 LUC7LQ9NQ29 371 aaKnown RBP19.04■□□□□ 0.64
RXRA-201ENST00000356384 CYP46A1Q9Y6A2 500 aa19.04■□□□□ 0.64
RXRA-201ENST00000356384 DNMBPQ6XZF7 1577 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms