RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 ANKRD1Q15327 319 aa15.12■□□□□ 0.01
SYNCRIP-201ENST00000355238 TCP11L2Q8N4U5 519 aa15.12■□□□□ 0.01
SYNCRIP-201ENST00000355238 JMYQ8N9B5 988 aa15.12■□□□□ 0.01
SYNCRIP-201ENST00000355238 CUX1P39880 1505 aa15.12■□□□□ 0.01
SYNCRIP-201ENST00000355238 PRDM10Q9NQV6 1147 aa15.12■□□□□ 0.01
SYNCRIP-201ENST00000355238 ERLIN2O94905 339 aa15.12■□□□□ 0.01
SYNCRIP-201ENST00000355238 STK38Q15208 465 aa15.11■□□□□ 0.01
SYNCRIP-201ENST00000355238 DHX16O60231 1041 aaKnown RBP15.11■□□□□ 0.01
SYNCRIP-201ENST00000355238 PPFIBP1Q86W92 1011 aa15.11■□□□□ 0.01
SYNCRIP-201ENST00000355238 ERCC6Q03468 1493 aa15.11■□□□□ 0.01
SYNCRIP-201ENST00000355238 MYOM3Q5VTT5 1437 aa15.11■□□□□ 0.01
SYNCRIP-201ENST00000355238 PPP2R1AP30153 589 aa15.11■□□□□ 0.01
SYNCRIP-201ENST00000355238 CT47A1Q5JQC4 288 aaPredicted RBP15.11■□□□□ 0.01
SYNCRIP-201ENST00000355238 MPNDQ8N594 471 aa15.11■□□□□ 0.01
SYNCRIP-201ENST00000355238 NUTM2DQ5VT03 806 aaPredicted RBP15.11■□□□□ 0.01
SYNCRIP-201ENST00000355238 ZNHIT6Q9NWK9 470 aaKnown RBP15.11■□□□□ 0.01
SYNCRIP-201ENST00000355238 RUSC2Q8N2Y8 1516 aa15.1■□□□□ 0.01
SYNCRIP-201ENST00000355238 IQCEQ6IPM2 695 aa15.1■□□□□ 0.01
SYNCRIP-201ENST00000355238 CLASRPQ8N2M8 674 aaKnown RBP15.1■□□□□ 0.01
SYNCRIP-201ENST00000355238 PLCD4Q9BRC7 762 aa15.1■□□□□ 0.01
SYNCRIP-201ENST00000355238 GBP3Q9H0R5 595 aa15.1■□□□□ 0.01
SYNCRIP-201ENST00000355238 TSPYL4Q9UJ04 414 aa15.1■□□□□ 0.01
SYNCRIP-201ENST00000355238 NUP62CLQ9H1M0 184 aa15.1■□□□□ 0.01
SYNCRIP-201ENST00000355238 EPS15P42566 896 aa15.1■□□□□ 0.01
SYNCRIP-201ENST00000355238 MAGEC2Q9UBF1 373 aaPredicted RBP15.1■□□□□ 0.01
SYNCRIP-201ENST00000355238 DYNC1I1O14576 645 aa15.1■□□□□ 0.01
SYNCRIP-201ENST00000355238 TXLNBQ8N3L3 684 aa15.1■□□□□ 0.01
SYNCRIP-201ENST00000355238 CYP46A1Q9Y6A2 500 aa15.1■□□□□ 0.01
SYNCRIP-201ENST00000355238 HSP90AB2PQ58FF8 381 aa15.09■□□□□ 0.01
SYNCRIP-201ENST00000355238 CEP57L1Q8IYX8 460 aa15.09■□□□□ 0.01
SYNCRIP-201ENST00000355238 GIMAP7Q8NHV1 300 aa15.09■□□□□ 0.01
SYNCRIP-201ENST00000355238 BCAR3O75815 825 aa15.09■□□□□ 0.01
SYNCRIP-201ENST00000355238 SKIDA1Q1XH10 827 aa15.09■□□□□ 0.01
SYNCRIP-201ENST00000355238 FSD1Q9BTV5 496 aa15.09■□□□□ 0.01
SYNCRIP-201ENST00000355238 TDRD9Q8NDG6 1382 aaKnown RBP15.09■□□□□ 0.01
SYNCRIP-201ENST00000355238 WIZO95785 1651 aa15.09■□□□□ 0.01
SYNCRIP-201ENST00000355238 SYCE3A1L190 88 aa15.08■□□□□ 0.01
SYNCRIP-201ENST00000355238 MVPQ14764 893 aaKnown RBP15.08■□□□□ 0.01
SYNCRIP-201ENST00000355238 AEBP2Q6ZN18 517 aaPredicted RBP15.08■□□□□ 0
SYNCRIP-201ENST00000355238 CHD1LQ86WJ1 897 aa15.08■□□□□ 0
SYNCRIP-201ENST00000355238 CCDC102AQ96A19 550 aa15.08■□□□□ 0
SYNCRIP-201ENST00000355238 INCENPQ9NQS7 918 aa15.08■□□□□ 0
SYNCRIP-201ENST00000355238 LUC7LQ9NQ29 371 aaKnown RBP15.08■□□□□ 0
SYNCRIP-201ENST00000355238 NOL10Q9BSC4 688 aaKnown RBP15.08■□□□□ 0
SYNCRIP-201ENST00000355238 LRRCC1Q9C099 1032 aa15.08■□□□□ 0
SYNCRIP-201ENST00000355238 EXOSC9Q06265 439 aaKnown RBP15.07■□□□□ 0
SYNCRIP-201ENST00000355238 NECTIN2Q92692 538 aa15.07■□□□□ 0
SYNCRIP-201ENST00000355238 PTPN14Q15678 1187 aa15.07■□□□□ 0
SYNCRIP-201ENST00000355238 SCAPERQ9BY12 1400 aa15.07■□□□□ 0
SYNCRIP-201ENST00000355238 ODF2Q5BJF6 829 aa15.07■□□□□ 0
SYNCRIP-201ENST00000355238 TTC5Q8N0Z6 440 aa15.07■□□□□ 0
SYNCRIP-201ENST00000355238 CCDC181Q5TID7 509 aa15.07■□□□□ 0
SYNCRIP-201ENST00000355238 GTF2E1P29083 439 aaPredicted RBP15.06■□□□□ 0
SYNCRIP-201ENST00000355238 FILIP1Q7Z7B0 1213 aa15.06■□□□□ 0
SYNCRIP-201ENST00000355238 ZSCAN31Q96LW9 406 aaPredicted RBP15.06■□□□□ 0
SYNCRIP-201ENST00000355238 XPCQ01831 940 aaPredicted RBP15.06■□□□□ 0
SYNCRIP-201ENST00000355238 WDR63Q8IWG1 891 aa15.06■□□□□ 0
SYNCRIP-201ENST00000355238 KIF18AQ8NI77 898 aa15.06■□□□□ 0
SYNCRIP-201ENST00000355238 FAM107BQ9H098 131 aa15.06■□□□□ 0
SYNCRIP-201ENST00000355238 RRBP1Q9P2E9 1410 aaKnown RBP15.06■□□□□ 0
SYNCRIP-201ENST00000355238 G3V3G9 751 aa15.06■□□□□ 0
SYNCRIP-201ENST00000355238 MAP3K11Q16584 847 aa15.06■□□□□ 0
SYNCRIP-201ENST00000355238 DCAF8Q5TAQ9 597 aa15.06■□□□□ 0
SYNCRIP-201ENST00000355238 NOB1Q9ULX3 412 aaKnown RBP15.06■□□□□ 0
SYNCRIP-201ENST00000355238 EID1Q9Y6B2 187 aa15.06■□□□□ 0
SYNCRIP-201ENST00000355238 CLCN1P35523 988 aa15.06■□□□□ 0
SYNCRIP-201ENST00000355238 LARP1BQ659C4 914 aaKnown RBP15.06■□□□□ 0
SYNCRIP-201ENST00000355238 CFAP45Q9UL16 551 aa15.06■□□□□ 0
SYNCRIP-201ENST00000355238 SMTNL1A8MU46 457 aa15.05■□□□□ 0
SYNCRIP-201ENST00000355238 SURF6O75683 361 aaKnown RBP15.05■□□□□ -0
SYNCRIP-201ENST00000355238 BRPF1P55201 1214 aaPredicted RBP15.05■□□□□ -0
SYNCRIP-201ENST00000355238 SPATA32Q96LK8 384 aa15.05■□□□□ -0
SYNCRIP-201ENST00000355238 TXLNAP40222 546 aa15.05■□□□□ -0
SYNCRIP-201ENST00000355238 ME1P48163 572 aa15.05■□□□□ -0
SYNCRIP-201ENST00000355238 KIF21BO75037 1637 aa15.05■□□□□ -0
SYNCRIP-201ENST00000355238 SHTN1A0MZ66 631 aa15.04■□□□□ -0
SYNCRIP-201ENST00000355238 ERC1Q8IUD2 1116 aa15.04■□□□□ -0
SYNCRIP-201ENST00000355238 TCEAL9Q9UHQ7 104 aa15.04■□□□□ -0
SYNCRIP-201ENST00000355238 LRRC9Q6ZRR7 1453 aa15.04■□□□□ -0
SYNCRIP-201ENST00000355238 WASHC4Q2M389 1173 aa15.04■□□□□ -0
SYNCRIP-201ENST00000355238 PRIMPOLQ96LW4 560 aa15.04■□□□□ -0
SYNCRIP-201ENST00000355238 UPF3BQ9BZI7 483 aaKnown RBP15.04■□□□□ -0
SYNCRIP-201ENST00000355238 MINK1Q8N4C8 1332 aaPredicted RBP15.04■□□□□ -0
SYNCRIP-201ENST00000355238 GNAI2P04899 355 aa15.04■□□□□ -0
SYNCRIP-201ENST00000355238 CEBPZQ03701 1054 aaKnown RBP15.04■□□□□ -0
SYNCRIP-201ENST00000355238 ATF7IPQ6VMQ6 1270 aa15.04■□□□□ -0
SYNCRIP-201ENST00000355238 FAM177A1Q8N128 213 aaPredicted RBP15.04■□□□□ -0
SYNCRIP-201ENST00000355238 SRCIN1Q9C0H9 1055 aa15.04■□□□□ -0
SYNCRIP-201ENST00000355238 PPP6R1Q9UPN7 881 aa15.04■□□□□ -0
SYNCRIP-201ENST00000355238 MTHFSP49914 203 aa15.03■□□□□ -0
SYNCRIP-201ENST00000355238 MAPK8IP2Q13387 824 aaPredicted RBP15.03■□□□□ -0
SYNCRIP-201ENST00000355238 SART3Q15020 963 aaKnown RBP15.03■□□□□ -0
SYNCRIP-201ENST00000355238 CCDC183Q5T5S1 534 aa15.03■□□□□ -0
SYNCRIP-201ENST00000355238 WWC1Q8IX03 1113 aa15.03■□□□□ -0
SYNCRIP-201ENST00000355238 HMOX1P09601 288 aa15.02■□□□□ -0
SYNCRIP-201ENST00000355238 PPP4R3BQ5MIZ7 849 aa15.02■□□□□ -0
SYNCRIP-201ENST00000355238 ZHX1Q9UKY1 873 aaPredicted RBP15.02■□□□□ -0
SYNCRIP-201ENST00000355238 ZSCAN12O43309 604 aa15.02□□□□□ -0.01
SYNCRIP-201ENST00000355238 CCDC30Q5VVM6 783 aa15.02□□□□□ -0.01
SYNCRIP-201ENST00000355238 CRACR2AQ9BSW2 395 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms