RNA–Protein interactions for RNA: ENST00000353442.9

LMBR1-201, Transcript of limb development membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMBR1, Length 7,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-201ENST00000353442 WWC3Q9ULE0 1092 aa16.06■□□□□ 0.16
LMBR1-201ENST00000353442 DRC1Q96MC2 740 aa16.06■□□□□ 0.16
LMBR1-201ENST00000353442 ACBD3Q9H3P7 528 aa16.06■□□□□ 0.16
LMBR1-201ENST00000353442 TSPYL1Q9H0U9 437 aa16.06■□□□□ 0.16
LMBR1-201ENST00000353442 RSPH4AQ5TD94 716 aa16.05■□□□□ 0.16
LMBR1-201ENST00000353442 ERC1Q8IUD2 1116 aa16.05■□□□□ 0.16
LMBR1-201ENST00000353442 API5Q9BZZ5 524 aaKnown RBP16.05■□□□□ 0.16
LMBR1-201ENST00000353442 E9PSI1 815 aa16.05■□□□□ 0.16
LMBR1-201ENST00000353442 AXDND1Q5T1B0 1012 aaPredicted RBP16.05■□□□□ 0.16
LMBR1-201ENST00000353442 CHMP5Q9NZZ3 219 aa16.05■□□□□ 0.16
LMBR1-201ENST00000353442 CCDC69A6NI79 296 aa16.05■□□□□ 0.16
LMBR1-201ENST00000353442 INTS3Q68E01 1043 aaKnown RBP16.05■□□□□ 0.16
LMBR1-201ENST00000353442 GPRASP1Q5JY77 1395 aa16.05■□□□□ 0.16
LMBR1-201ENST00000353442 SURF6O75683 361 aaKnown RBP16.05■□□□□ 0.16
LMBR1-201ENST00000353442 CNTROBQ8N137 903 aa16.05■□□□□ 0.16
LMBR1-201ENST00000353442 ANKRD18AQ8IVF6 992 aa16.05■□□□□ 0.16
LMBR1-201ENST00000353442 EXOC6Q8TAG9 804 aa16.05■□□□□ 0.16
LMBR1-201ENST00000353442 TATP17735 454 aaPredicted RBP16.04■□□□□ 0.16
LMBR1-201ENST00000353442 FKBP4Q02790 459 aaKnown RBP eCLIP16.04■□□□□ 0.16
LMBR1-201ENST00000353442 FILIP1LQ4L180 1135 aa16.04■□□□□ 0.16
LMBR1-201ENST00000353442 RAI14Q9P0K7 980 aa16.04■□□□□ 0.16
LMBR1-201ENST00000353442 VTI1AQ96AJ9 217 aa16.04■□□□□ 0.16
LMBR1-201ENST00000353442 TMOD2Q9NZR1 351 aa16.04■□□□□ 0.16
LMBR1-201ENST00000353442 DZIP1LQ8IYY4 767 aaKnown RBP16.03■□□□□ 0.16
LMBR1-201ENST00000353442 OSCARQ8IYS5 282 aa16.03■□□□□ 0.16
LMBR1-201ENST00000353442 ADAMTS2O95450 1211 aa16.03■□□□□ 0.16
LMBR1-201ENST00000353442 NOM1Q5C9Z4 860 aaKnown RBP16.03■□□□□ 0.16
LMBR1-201ENST00000353442 RNF214Q8ND24 703 aa16.03■□□□□ 0.16
LMBR1-201ENST00000353442 DDX19BQ9UMR2 479 aa16.03■□□□□ 0.16
LMBR1-201ENST00000353442 NINLQ9Y2I6 1382 aa16.03■□□□□ 0.16
LMBR1-201ENST00000353442 DESP17661 470 aa16.02■□□□□ 0.16
LMBR1-201ENST00000353442 SMARCE1Q969G3 411 aa16.02■□□□□ 0.16
LMBR1-201ENST00000353442 COMMD10Q9Y6G5 202 aa16.02■□□□□ 0.16
LMBR1-201ENST00000353442 NAT10Q9H0A0 1025 aaKnown RBP16.02■□□□□ 0.16
LMBR1-201ENST00000353442 TMEM132EQ6IEE7 984 aa16.02■□□□□ 0.15
LMBR1-201ENST00000353442 SKOR2Q2VWA4 1001 aaPredicted RBP16.02■□□□□ 0.15
LMBR1-201ENST00000353442 HSP90AB3PQ58FF7 597 aa16.02■□□□□ 0.15
LMBR1-201ENST00000353442 ARGLU1Q9NWB6 273 aaPredicted RBP16.02■□□□□ 0.15
LMBR1-201ENST00000353442 CCDC144AA2RUR9 1427 aa16.01■□□□□ 0.15
LMBR1-201ENST00000353442 MYO15BQ96JP2 1530 aa16.01■□□□□ 0.15
LMBR1-201ENST00000353442 ERLIN2O94905 339 aa16.01■□□□□ 0.15
LMBR1-201ENST00000353442 FAM193AP78312 1265 aa16.01■□□□□ 0.15
LMBR1-201ENST00000353442 FAM177A1Q8N128 213 aaPredicted RBP16.01■□□□□ 0.15
LMBR1-201ENST00000353442 SOGA1O94964 1423 aa16.01■□□□□ 0.15
LMBR1-201ENST00000353442 TRIM21P19474 475 aaKnown RBP16.01■□□□□ 0.15
LMBR1-201ENST00000353442 CRACR2BQ8N4Y2 399 aaPredicted RBP16.01■□□□□ 0.15
LMBR1-201ENST00000353442 ROCK1Q13464 1354 aa16■□□□□ 0.15
LMBR1-201ENST00000353442 ANAPC15P60006 121 aa16■□□□□ 0.15
LMBR1-201ENST00000353442 C1orf115Q9H7X2 142 aa16■□□□□ 0.15
LMBR1-201ENST00000353442 PSMA5P28066 241 aa16■□□□□ 0.15
LMBR1-201ENST00000353442 PLEKHO1Q53GL0 409 aaPredicted RBP16■□□□□ 0.15
LMBR1-201ENST00000353442 CENPQQ7L2Z9 268 aaPredicted RBP16■□□□□ 0.15
LMBR1-201ENST00000353442 JPH4Q96JJ6 628 aa16■□□□□ 0.15
LMBR1-201ENST00000353442 TXNDC2Q86VQ3 553 aa15.99■□□□□ 0.15
LMBR1-201ENST00000353442 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.99■□□□□ 0.152e-6■■■□□ 14.7
LMBR1-201ENST00000353442 CLEC11AQ9Y240 323 aa15.99■□□□□ 0.15
LMBR1-201ENST00000353442 GBP2P32456 591 aaPredicted RBP15.99■□□□□ 0.15
LMBR1-201ENST00000353442 TDO2P48775 406 aa15.99■□□□□ 0.15
LMBR1-201ENST00000353442 CLASRPQ8N2M8 674 aaKnown RBP15.99■□□□□ 0.15
LMBR1-201ENST00000353442 CECR2Q9BXF3 1484 aa15.98■□□□□ 0.15
LMBR1-201ENST00000353442 KIF15Q9NS87 1388 aa15.98■□□□□ 0.15
LMBR1-201ENST00000353442 STK38Q15208 465 aa15.98■□□□□ 0.15
LMBR1-201ENST00000353442 MYBBP1AQ9BQG0 1328 aaKnown RBP15.98■□□□□ 0.15
LMBR1-201ENST00000353442 TNIKQ9UKE5 1360 aa15.98■□□□□ 0.15
LMBR1-201ENST00000353442 DHX8Q14562 1220 aaKnown RBP15.98■□□□□ 0.15
LMBR1-201ENST00000353442 CCDC112Q8NEF3 446 aa15.98■□□□□ 0.15
LMBR1-201ENST00000353442 TAF3Q5VWG9 929 aa15.98■□□□□ 0.15
LMBR1-201ENST00000353442 PUS7Q96PZ0 661 aaKnown RBP15.98■□□□□ 0.15
LMBR1-201ENST00000353442 TRIM5Q9C035 493 aa15.98■□□□□ 0.15
LMBR1-201ENST00000353442 ZNHIT6Q9NWK9 470 aaKnown RBP15.98■□□□□ 0.15
LMBR1-201ENST00000353442 SPC24Q8NBT2 197 aa15.97■□□□□ 0.15
LMBR1-201ENST00000353442 ABCF2Q9UG63 623 aa15.97■□□□□ 0.15
LMBR1-201ENST00000353442 CT47B1P0C2W7 299 aaPredicted RBP15.97■□□□□ 0.15
LMBR1-201ENST00000353442 TSHZ2Q9NRE2 1034 aa15.97■□□□□ 0.15
LMBR1-201ENST00000353442 SERPINC1P01008 464 aa15.97■□□□□ 0.15
LMBR1-201ENST00000353442 UBA5Q9GZZ9 404 aa15.97■□□□□ 0.15
LMBR1-201ENST00000353442 LRP2BPQ9P2M1 347 aa15.97■□□□□ 0.15
LMBR1-201ENST00000353442 UACAQ9BZF9 1416 aa15.97■□□□□ 0.15
LMBR1-201ENST00000353442 EZRP15311 586 aaKnown RBP15.97■□□□□ 0.15
LMBR1-201ENST00000353442 CCDC57Q2TAC2 916 aa15.97■□□□□ 0.15
LMBR1-201ENST00000353442 NACAP1Q9BZK3 213 aa15.97■□□□□ 0.15
LMBR1-201ENST00000353442 NFKBIBQ15653 356 aa15.96■□□□□ 0.15
LMBR1-201ENST00000353442 C16orf71Q8IYS4 520 aaPredicted RBP15.96■□□□□ 0.15
LMBR1-201ENST00000353442 GNAI1P63096 354 aa15.96■□□□□ 0.15
LMBR1-201ENST00000353442 ANKIB1Q9P2G1 1089 aa15.96■□□□□ 0.15
LMBR1-201ENST00000353442 KINO60870 393 aaKnown RBP15.96■□□□□ 0.15
LMBR1-201ENST00000353442 SLC4A8Q2Y0W8 1093 aa15.96■□□□□ 0.15
LMBR1-201ENST00000353442 CCDC30Q5VVM6 783 aa15.96■□□□□ 0.15
LMBR1-201ENST00000353442 PPP4R3AQ6IN85 833 aa15.95■□□□□ 0.14
LMBR1-201ENST00000353442 RAB3GAP2Q9H2M9 1393 aa15.95■□□□□ 0.14
LMBR1-201ENST00000353442 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.95■□□□□ 0.14
LMBR1-201ENST00000353442 POLR3DP05423 398 aaPredicted RBP15.94■□□□□ 0.14
LMBR1-201ENST00000353442 PDE4AP27815 886 aa15.94■□□□□ 0.14
LMBR1-201ENST00000353442 MPNDQ8N594 471 aa15.94■□□□□ 0.14
LMBR1-201ENST00000353442 ZPR1O75312 459 aa15.94■□□□□ 0.14
LMBR1-201ENST00000353442 PRDM11Q9NQV5 511 aa15.94■□□□□ 0.14
LMBR1-201ENST00000353442 GOLGA6L10A6NI86 522 aa15.94■□□□□ 0.14
LMBR1-201ENST00000353442 SMG6Q86US8 1419 aaKnown RBP15.94■□□□□ 0.14
LMBR1-201ENST00000353442 MAP3K9P80192 1104 aa15.94■□□□□ 0.14
LMBR1-201ENST00000353442 MTHFSP49914 203 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms