RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 RBSNQ9H1K0 784 aa9.45□□□□□ -0.9
BRCA1-201ENST00000352993 ADGRL2O95490 1459 aa9.44□□□□□ -0.9
BRCA1-201ENST00000352993 U2AF1L5P0DN76 240 aaPredicted RBP9.44□□□□□ -0.9
BRCA1-201ENST00000352993 TERF1P54274 439 aa9.44□□□□□ -0.9
BRCA1-201ENST00000352993 CBX1P83916 185 aa9.44□□□□□ -0.9
BRCA1-201ENST00000352993 U2AF1Q01081 240 aaKnown RBP eCLIP9.44□□□□□ -0.9
BRCA1-201ENST00000352993 RBM27Q9P2N5 1060 aaKnown RBP9.44□□□□□ -0.9
BRCA1-201ENST00000352993 DDX19BQ9UMR2 479 aa9.44□□□□□ -0.9
BRCA1-201ENST00000352993 NOL7Q9UMY1 257 aaKnown RBP9.44□□□□□ -0.9
BRCA1-201ENST00000352993 KIDINS220Q9ULH0 1771 aa9.44□□□□□ -0.9
BRCA1-201ENST00000352993 PRIM1P49642 420 aaKnown RBP9.44□□□□□ -0.9
BRCA1-201ENST00000352993 ZSCAN23Q3MJ62 389 aa9.44□□□□□ -0.9
BRCA1-201ENST00000352993 PIK3C2GO75747 1445 aa9.44□□□□□ -0.9
BRCA1-201ENST00000352993 GPRASP1Q5JY77 1395 aa9.44□□□□□ -0.9
BRCA1-201ENST00000352993 KDM5DQ9BY66 1539 aa9.44□□□□□ -0.9
BRCA1-201ENST00000352993 A2MP01023 1474 aa9.44□□□□□ -0.9
BRCA1-201ENST00000352993 TRPM1Q7Z4N2 1603 aa9.44□□□□□ -0.9
BRCA1-201ENST00000352993 SASS6Q6UVJ0 657 aa9.44□□□□□ -0.9
BRCA1-201ENST00000352993 INO80Q9ULG1 1556 aaPredicted RBP9.44□□□□□ -0.9
BRCA1-201ENST00000352993 ASXL1Q8IXJ9 1541 aa9.44□□□□□ -0.9
BRCA1-201ENST00000352993 RBM25P49756 843 aaKnown RBP9.43□□□□□ -0.9
BRCA1-201ENST00000352993 ZKSCAN5Q9Y2L8 839 aa9.43□□□□□ -0.9
BRCA1-201ENST00000352993 ABCC1P33527 1531 aa9.43□□□□□ -0.9
BRCA1-201ENST00000352993 TSC1Q92574 1164 aa9.43□□□□□ -0.9
BRCA1-201ENST00000352993 CFAP53Q96M91 514 aa9.43□□□□□ -0.9
BRCA1-201ENST00000352993 CCDC39Q9UFE4 941 aa9.43□□□□□ -0.9
BRCA1-201ENST00000352993 EXOSC9Q06265 439 aaKnown RBP9.42□□□□□ -0.9
BRCA1-201ENST00000352993 SYCE3A1L190 88 aa9.42□□□□□ -0.9
BRCA1-201ENST00000352993 U2SURPO15042 1029 aaKnown RBP9.42□□□□□ -0.9
BRCA1-201ENST00000352993 TRIM27P14373 513 aa9.42□□□□□ -0.9
BRCA1-201ENST00000352993 DDIT3P35638 169 aa9.42□□□□□ -0.9
BRCA1-201ENST00000352993 NOB1Q9ULX3 412 aaKnown RBP9.42□□□□□ -0.9
BRCA1-201ENST00000352993 POGZQ7Z3K3 1410 aa9.42□□□□□ -0.9
BRCA1-201ENST00000352993 ZMYM3Q14202 1370 aa9.41□□□□□ -0.9
BRCA1-201ENST00000352993 ZNF500O60304 480 aaPredicted RBP9.41□□□□□ -0.9
BRCA1-201ENST00000352993 PLCB2Q00722 1185 aa9.41□□□□□ -0.9
BRCA1-201ENST00000352993 WDR63Q8IWG1 891 aa9.41□□□□□ -0.9
BRCA1-201ENST00000352993 TMEM57Q8N5G2 664 aa9.41□□□□□ -0.9
BRCA1-201ENST00000352993 RTEL1-TNFRSF6BF6WH68 1400 aa9.41□□□□□ -0.9
BRCA1-201ENST00000352993 FAM177BA6PVY3 158 aa9.41□□□□□ -0.9
BRCA1-201ENST00000352993 CHD1LQ86WJ1 897 aa9.41□□□□□ -0.9
BRCA1-201ENST00000352993 JARID2Q92833 1246 aaPredicted RBP9.41□□□□□ -0.9
BRCA1-201ENST00000352993 NUCB2P80303 420 aa9.41□□□□□ -0.9
BRCA1-201ENST00000352993 HDAC1Q13547 482 aaPredicted RBP9.41□□□□□ -0.9
BRCA1-201ENST00000352993 HS1BP3Q53T59 392 aa9.41□□□□□ -0.9
BRCA1-201ENST00000352993 CCDC94Q9BW85 323 aaPredicted RBP9.41□□□□□ -0.9
BRCA1-201ENST00000352993 FOXD4L6Q3SYB3 417 aaPredicted RBP9.4□□□□□ -0.9
BRCA1-201ENST00000352993 FOXD4L3Q6VB84 417 aaPredicted RBP9.4□□□□□ -0.9
BRCA1-201ENST00000352993 C1orf115Q9H7X2 142 aa9.4□□□□□ -0.9
BRCA1-201ENST00000352993 KIF16BQ96L93 1317 aa9.4□□□□□ -0.9
BRCA1-201ENST00000352993 MTHFSP49914 203 aa9.4□□□□□ -0.9
BRCA1-201ENST00000352993 KIAA2012Q0VF49 1180 aa9.4□□□□□ -0.9
BRCA1-201ENST00000352993 ATF7IPQ6VMQ6 1270 aa9.4□□□□□ -0.9
BRCA1-201ENST00000352993 SSH1Q8WYL5 1049 aa9.4□□□□□ -0.9
BRCA1-201ENST00000352993 PRDM15P57071 1507 aaPredicted RBP9.4□□□□□ -0.9
BRCA1-201ENST00000352993 FANCAO15360 1455 aa9.4□□□□□ -0.91
BRCA1-201ENST00000352993 ZNF445P59923 1031 aa9.4□□□□□ -0.91
BRCA1-201ENST00000352993 CARD14Q9BXL6 1004 aa9.4□□□□□ -0.91
BRCA1-201ENST00000352993 FGD1P98174 961 aa9.39□□□□□ -0.91
BRCA1-201ENST00000352993 TBC1D9Q6ZT07 1266 aa9.39□□□□□ -0.91
BRCA1-201ENST00000352993 AK9Q5TCS8 1911 aa9.39□□□□□ -0.91
BRCA1-201ENST00000352993 BBXQ8WY36 941 aaPredicted RBP9.39□□□□□ -0.91
BRCA1-201ENST00000352993 CHAMP1Q96JM3 812 aa9.39□□□□□ -0.91
BRCA1-201ENST00000352993 PLCH2O75038 1416 aa9.39□□□□□ -0.91
BRCA1-201ENST00000352993 MLH3Q9UHC1 1453 aa9.39□□□□□ -0.91
BRCA1-201ENST00000352993 PKP1Q13835 747 aa9.38□□□□□ -0.91
BRCA1-201ENST00000352993 SPDYE4A6NLX3 237 aa9.38□□□□□ -0.91
BRCA1-201ENST00000352993 IPO8O15397 1037 aaKnown RBP9.38□□□□□ -0.91
BRCA1-201ENST00000352993 IGSF3O75054 1194 aa9.38□□□□□ -0.91
BRCA1-201ENST00000352993 ZNF830Q96NB3 372 aaPredicted RBP9.38□□□□□ -0.91
BRCA1-201ENST00000352993 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.38□□□□□ -0.91
BRCA1-201ENST00000352993 NUCB1Q02818 461 aa9.38□□□□□ -0.91
BRCA1-201ENST00000352993 LMBRD1Q9NUN5 540 aa9.38□□□□□ -0.91
BRCA1-201ENST00000352993 NCOA3Q9Y6Q9 1424 aa9.38□□□□□ -0.91
BRCA1-201ENST00000352993 DMTNQ08495 405 aa9.37□□□□□ -0.91
BRCA1-201ENST00000352993 PPP4R3BQ5MIZ7 849 aa9.37□□□□□ -0.91
BRCA1-201ENST00000352993 APBB1O00213 710 aa9.37□□□□□ -0.91
BRCA1-201ENST00000352993 MCM5P33992 734 aa9.37□□□□□ -0.91
BRCA1-201ENST00000352993 BMP2KLQ5H9B9 411 aa9.37□□□□□ -0.91
BRCA1-201ENST00000352993 KIF2CQ99661 725 aa9.37□□□□□ -0.91
BRCA1-201ENST00000352993 NOL8Q76FK4 1167 aaKnown RBP9.36□□□□□ -0.91
BRCA1-201ENST00000352993 CFAP70Q5T0N1 1121 aa9.36□□□□□ -0.91
BRCA1-201ENST00000352993 CDC45O75419 566 aa9.36□□□□□ -0.91
BRCA1-201ENST00000352993 CHGAP10645 457 aaKnown RBP9.36□□□□□ -0.91
BRCA1-201ENST00000352993 LRSAM1Q6UWE0 723 aa9.36□□□□□ -0.91
BRCA1-201ENST00000352993 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.36□□□□□ -0.91
BRCA1-201ENST00000352993 PDE4CQ08493 712 aa9.35□□□□□ -0.91
BRCA1-201ENST00000352993 RABEP1Q15276 862 aa9.35□□□□□ -0.91
BRCA1-201ENST00000352993 C17orf53Q8N3J3 647 aaPredicted RBP9.35□□□□□ -0.91
BRCA1-201ENST00000352993 ZGPATQ8N5A5 531 aaKnown RBP9.35□□□□□ -0.91
BRCA1-201ENST00000352993 SLC12A5Q9H2X9 1139 aa9.35□□□□□ -0.91
BRCA1-201ENST00000352993 IBTKQ9P2D0 1353 aaPredicted RBP9.35□□□□□ -0.91
BRCA1-201ENST00000352993 SETD1BQ9UPS6 1966 aaKnown RBP9.35□□□□□ -0.91
BRCA1-201ENST00000352993 LTBP4Q8N2S1 1624 aa9.35□□□□□ -0.91
BRCA1-201ENST00000352993 GPT2Q8TD30 523 aa9.35□□□□□ -0.91
BRCA1-201ENST00000352993 PDLIM2Q96JY6 352 aa9.35□□□□□ -0.91
BRCA1-201ENST00000352993 TMEM63CQ9P1W3 806 aa9.35□□□□□ -0.91
BRCA1-201ENST00000352993 PLA2R1Q13018 1463 aa9.35□□□□□ -0.91
BRCA1-201ENST00000352993 ST18O60284 1047 aa9.35□□□□□ -0.91
BRCA1-201ENST00000352993 ZNF771Q7L3S4 317 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms