RNA–Protein interactions for RNA: ENST00000351097.9

USP25-203, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 2,158 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-203ENST00000351097 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.84■■■□□ 2.53
USP25-203ENST00000351097 AMOTL2Q9Y2J4 779 aa30.84■■■□□ 2.53
USP25-203ENST00000351097 PRR36Q9H6K5 1346 aa30.84■■■□□ 2.53
USP25-203ENST00000351097 ADAMTSL3P82987 1691 aa30.84■■■□□ 2.53
USP25-203ENST00000351097 SLFN5Q08AF3 891 aa30.83■■■□□ 2.53
USP25-203ENST00000351097 DIP2AQ14689 1571 aa30.83■■■□□ 2.53
USP25-203ENST00000351097 C20orf194Q5TEA3 1177 aa30.83■■■□□ 2.53
USP25-203ENST00000351097 CDC42BPGQ6DT37 1551 aa30.83■■■□□ 2.53
USP25-203ENST00000351097 EDC4Q6P2E9 1401 aaKnown RBP30.82■■■□□ 2.52
USP25-203ENST00000351097 NGEFQ8N5V2 710 aa30.82■■■□□ 2.52
USP25-203ENST00000351097 BACH2Q9BYV9 841 aa30.82■■■□□ 2.52
USP25-203ENST00000351097 ZBTB47Q9UFB7 747 aaPredicted RBP30.82■■■□□ 2.52
USP25-203ENST00000351097 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.8■■■□□ 2.52
USP25-203ENST00000351097 RUNDC1Q96C34 613 aa30.8■■■□□ 2.52
USP25-203ENST00000351097 PTCH1Q13635 1447 aa30.79■■■□□ 2.52
USP25-203ENST00000351097 TRMT2AQ8IZ69 625 aaKnown RBP30.79■■■□□ 2.52
USP25-203ENST00000351097 COL3A1P02461 1466 aaPredicted RBP30.79■■■□□ 2.52
USP25-203ENST00000351097 IQSEC2Q5JU85 1478 aa30.76■■■□□ 2.52
USP25-203ENST00000351097 MON2Q7Z3U7 1717 aa30.75■■■□□ 2.51
USP25-203ENST00000351097 SPINK5Q9NQ38 1064 aaPredicted RBP30.74■■■□□ 2.51
USP25-203ENST00000351097 KDM2BQ8NHM5 1336 aa30.74■■■□□ 2.51
USP25-203ENST00000351097 U2AF1L5P0DN76 240 aaPredicted RBP30.73■■■□□ 2.51
USP25-203ENST00000351097 U2AF1Q01081 240 aaKnown RBP eCLIP30.73■■■□□ 2.51
USP25-203ENST00000351097 PNPLA6Q8IY17 1366 aa30.73■■■□□ 2.51
USP25-203ENST00000351097 NME9Q86XW9 330 aa30.72■■■□□ 2.51
USP25-203ENST00000351097 NKTRP30414 1462 aaKnown RBP30.72■■■□□ 2.51
USP25-203ENST00000351097 ZNF142P52746 1687 aaPredicted RBP30.72■■■□□ 2.51
USP25-203ENST00000351097 AKAP12Q02952 1782 aa30.72■■■□□ 2.51
USP25-203ENST00000351097 TCP11L2Q8N4U5 519 aa30.72■■■□□ 2.51
USP25-203ENST00000351097 XRN1Q8IZH2 1706 aaKnown RBP30.72■■■□□ 2.51
USP25-203ENST00000351097 ZNF692Q9BU19 519 aaPredicted RBP30.71■■■□□ 2.51
USP25-203ENST00000351097 TOPAZ1Q8N9V7 1692 aa30.71■■■□□ 2.51
USP25-203ENST00000351097 WWC1Q8IX03 1113 aa30.71■■■□□ 2.51
USP25-203ENST00000351097 DMRT2Q9Y5R5 561 aa30.71■■■□□ 2.51
USP25-203ENST00000351097 E9PSI1 815 aa30.7■■■□□ 2.51
USP25-203ENST00000351097 CENPQQ7L2Z9 268 aaPredicted RBP30.7■■■□□ 2.51
USP25-203ENST00000351097 NPM2Q86SE8 214 aaKnown RBP30.7■■■□□ 2.51
USP25-203ENST00000351097 ITSN1Q15811 1721 aa30.7■■■□□ 2.5
USP25-203ENST00000351097 NUTM2FA1L443 756 aa30.68■■■□□ 2.5
USP25-203ENST00000351097 PLEKHG3A1L390 1219 aa30.68■■■□□ 2.5
USP25-203ENST00000351097 FBLN1P23142 703 aa30.68■■■□□ 2.5
USP25-203ENST00000351097 POLKQ9UBT6 870 aa30.68■■■□□ 2.5
USP25-203ENST00000351097 RRP7AQ9Y3A4 280 aaKnown RBP30.68■■■□□ 2.5
USP25-203ENST00000351097 PIK3R4Q99570 1358 aa30.67■■■□□ 2.5
USP25-203ENST00000351097 PHF23Q9BUL5 403 aaPredicted RBP30.67■■■□□ 2.5
USP25-203ENST00000351097 ZRANB1Q9UGI0 708 aa30.67■■■□□ 2.5
USP25-203ENST00000351097 ANKLE2Q86XL3 938 aa30.66■■■□□ 2.5
USP25-203ENST00000351097 U2SURPO15042 1029 aaKnown RBP30.65■■■□□ 2.5
USP25-203ENST00000351097 NEUROD2Q15784 382 aa30.65■■■□□ 2.5
USP25-203ENST00000351097 KCNA6P17658 529 aa30.65■■■□□ 2.5
USP25-203ENST00000351097 NBR1Q14596 966 aa30.65■■■□□ 2.5
USP25-203ENST00000351097 ACEP12821 1306 aa30.65■■■□□ 2.5
USP25-203ENST00000351097 DIAPH1O60610 1272 aaKnown RBP30.64■■■□□ 2.5
USP25-203ENST00000351097 SKAP1Q86WV1 359 aa30.62■■■□□ 2.49
USP25-203ENST00000351097 PLEKHF1Q96S99 279 aa30.62■■■□□ 2.49
USP25-203ENST00000351097 NRKQ7Z2Y5 1582 aa30.61■■■□□ 2.49
USP25-203ENST00000351097 CCDC27Q2M243 656 aa30.61■■■□□ 2.49
USP25-203ENST00000351097 NCBP3Q53F19 620 aaKnown RBP30.61■■■□□ 2.49
USP25-203ENST00000351097 COG3Q96JB2 828 aa30.61■■■□□ 2.49
USP25-203ENST00000351097 AATKQ6ZMQ8 1374 aa30.61■■■□□ 2.49
USP25-203ENST00000351097 SETD1BQ9UPS6 1966 aaKnown RBP30.6■■■□□ 2.49
USP25-203ENST00000351097 PPM1GO15355 546 aaPredicted RBP30.59■■■□□ 2.49
USP25-203ENST00000351097 TTC21BQ7Z4L5 1316 aa30.58■■■□□ 2.49
USP25-203ENST00000351097 USP6P35125 1406 aa30.58■■■□□ 2.49
USP25-203ENST00000351097 EMILIN1Q9Y6C2 1016 aa30.58■■■□□ 2.49
USP25-203ENST00000351097 MAP2P11137 1827 aaKnown RBP30.58■■■□□ 2.49
USP25-203ENST00000351097 WDR63Q8IWG1 891 aa30.56■■■□□ 2.48
USP25-203ENST00000351097 BCL11AQ9H165 835 aa30.55■■■□□ 2.48
USP25-203ENST00000351097 BCAR3O75815 825 aa30.55■■■□□ 2.48
USP25-203ENST00000351097 CDK12Q9NYV4 1490 aaPredicted RBP30.54■■■□□ 2.48
USP25-203ENST00000351097 SSH2Q76I76 1423 aa30.53■■■□□ 2.48
USP25-203ENST00000351097 DEKP35659 375 aaKnown RBP30.53■■■□□ 2.48
USP25-203ENST00000351097 PMFBP1Q8TBY8 1022 aa30.52■■■□□ 2.48
USP25-203ENST00000351097 CHD2O14647 1828 aaKnown RBP30.51■■■□□ 2.47
USP25-203ENST00000351097 OVOS2A0A0J9YW53 1432 aa30.51■■■□□ 2.47
USP25-203ENST00000351097 OVOS2Q6IE36 1432 aa30.51■■■□□ 2.47
USP25-203ENST00000351097 RRS1Q15050 365 aaKnown RBP30.5■■■□□ 2.47
USP25-203ENST00000351097 MAPK8IP3Q9UPT6 1336 aa30.5■■■□□ 2.47
USP25-203ENST00000351097 TMPOP42166 694 aaKnown RBP30.49■■■□□ 2.47
USP25-203ENST00000351097 ANKARQ7Z5J8 1434 aa30.49■■■□□ 2.47
USP25-203ENST00000351097 FCHSD2O94868 740 aa30.49■■■□□ 2.47
USP25-203ENST00000351097 RTL5Q5HYW3 569 aaPredicted RBP30.49■■■□□ 2.47
USP25-203ENST00000351097 DDRGK1Q96HY6 314 aa30.49■■■□□ 2.47
USP25-203ENST00000351097 RGPD8O14715 1765 aaPredicted RBP30.48■■■□□ 2.47
USP25-203ENST00000351097 PDE3AQ14432 1141 aa30.48■■■□□ 2.47
USP25-203ENST00000351097 PNNQ9H307 717 aaKnown RBP30.48■■■□□ 2.47
USP25-203ENST00000351097 IL13P35225 146 aa30.47■■■□□ 2.47
USP25-203ENST00000351097 LRRC7Q96NW7 1537 aa30.47■■■□□ 2.47
USP25-203ENST00000351097 RSPH6AQ9H0K4 717 aa30.46■■■□□ 2.47
USP25-203ENST00000351097 NPHP4O75161 1426 aaPredicted RBP30.46■■■□□ 2.47
USP25-203ENST00000351097 FAM161AQ3B820 660 aa30.45■■■□□ 2.47
USP25-203ENST00000351097 NGDNQ8NEJ9 315 aaKnown RBP30.45■■■□□ 2.46
USP25-203ENST00000351097 TRIM35Q9UPQ4 493 aa30.45■■■□□ 2.46
USP25-203ENST00000351097 FMN2Q9NZ56 1722 aa30.45■■■□□ 2.46
USP25-203ENST00000351097 TTC21AQ8NDW8 1320 aa30.43■■■□□ 2.46
USP25-203ENST00000351097 PRKAR2BP31323 418 aa30.42■■■□□ 2.46
USP25-203ENST00000351097 USP31Q70CQ4 1352 aa30.41■■■□□ 2.46
USP25-203ENST00000351097 NALCNQ8IZF0 1738 aa30.41■■■□□ 2.46
USP25-203ENST00000351097 MYH16Q9H6N6 1097 aa30.4■■■□□ 2.46
USP25-203ENST00000351097 C8orf34Q49A92 452 aa30.39■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms