RNA–Protein interactions for RNA: ENST00000349893.8

COPE-202, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2 BASIC

Gene COPE, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-202ENST00000349893 ADGRB1O14514 1584 aa23.48■■□□□ 1.35
COPE-202ENST00000349893 GPRASP1Q5JY77 1395 aa23.48■■□□□ 1.35
COPE-202ENST00000349893 SAFB2Q14151 953 aaKnown RBP eCLIP23.47■■□□□ 1.35
COPE-202ENST00000349893 FAM182BQ5T319 152 aa23.47■■□□□ 1.35
COPE-202ENST00000349893 ACIN1Q9UKV3 1341 aaKnown RBP23.47■■□□□ 1.35
COPE-202ENST00000349893 EIF3AQ14152 1382 aaKnown RBP23.46■■□□□ 1.35
COPE-202ENST00000349893 TULP4Q9NRJ4 1543 aa23.46■■□□□ 1.35
COPE-202ENST00000349893 PARD3Q8TEW0 1356 aa23.45■■□□□ 1.34
COPE-202ENST00000349893 PRR36Q9H6K5 1346 aa23.45■■□□□ 1.34
COPE-202ENST00000349893 CAMKK2Q96RR4 588 aa23.45■■□□□ 1.34
COPE-202ENST00000349893 EZH2Q15910 746 aaKnown RBP23.44■■□□□ 1.34
COPE-202ENST00000349893 POGKQ9P215 609 aa23.44■■□□□ 1.34
COPE-202ENST00000349893 SPATA31A1Q5TZJ5 1347 aa23.43■■□□□ 1.34
COPE-202ENST00000349893 RREB1Q92766 1687 aa23.41■■□□□ 1.34
COPE-202ENST00000349893 FAM196AQ6ZSG2 479 aa23.41■■□□□ 1.34
COPE-202ENST00000349893 PRDM11Q9NQV5 511 aa23.39■■□□□ 1.33
COPE-202ENST00000349893 HIRIP3Q9BW71 556 aaPredicted RBP23.38■■□□□ 1.33
COPE-202ENST00000349893 PHRF1Q9P1Y6 1649 aaKnown RBP23.37■■□□□ 1.33
COPE-202ENST00000349893 WASLO00401 505 aaPredicted RBP23.37■■□□□ 1.33
COPE-202ENST00000349893 TRIM37O94972 964 aa23.37■■□□□ 1.33
COPE-202ENST00000349893 KIAA0232Q92628 1395 aa23.37■■□□□ 1.33
COPE-202ENST00000349893 NUP188Q5SRE5 1749 aa23.36■■□□□ 1.33
COPE-202ENST00000349893 ITSN1Q15811 1721 aa23.35■■□□□ 1.33
COPE-202ENST00000349893 ATP7BP35670 1465 aa23.35■■□□□ 1.33
COPE-202ENST00000349893 TRAK1Q9UPV9 953 aa23.34■■□□□ 1.33
COPE-202ENST00000349893 MINK1Q8N4C8 1332 aaPredicted RBP23.33■■□□□ 1.33
COPE-202ENST00000349893 BARGINQ6ZT62 677 aa23.33■■□□□ 1.33
COPE-202ENST00000349893 NGDNQ8NEJ9 315 aaKnown RBP23.33■■□□□ 1.33
COPE-202ENST00000349893 APBA3O96018 575 aa23.32■■□□□ 1.32
COPE-202ENST00000349893 PAK3O75914 559 aaPredicted RBP23.31■■□□□ 1.32
COPE-202ENST00000349893 CHRNA2Q15822 529 aa23.29■■□□□ 1.32
COPE-202ENST00000349893 SSH2Q76I76 1423 aa23.29■■□□□ 1.32
COPE-202ENST00000349893 YY1P25490 414 aa23.28■■□□□ 1.32
COPE-202ENST00000349893 ARHGEF28Q8N1W1 1705 aaKnown RBP23.28■■□□□ 1.32
COPE-202ENST00000349893 STRN4Q9NRL3 753 aa23.27■■□□□ 1.32
COPE-202ENST00000349893 LMO7Q8WWI1 1683 aa23.27■■□□□ 1.32
COPE-202ENST00000349893 NRKQ7Z2Y5 1582 aa23.27■■□□□ 1.32
COPE-202ENST00000349893 POLR3AO14802 1390 aaPredicted RBP23.27■■□□□ 1.31
COPE-202ENST00000349893 CAMTA1Q9Y6Y1 1673 aa23.26■■□□□ 1.31
COPE-202ENST00000349893 CPDO75976 1380 aa23.26■■□□□ 1.31
COPE-202ENST00000349893 TOPAZ1Q8N9V7 1692 aa23.25■■□□□ 1.31
COPE-202ENST00000349893 ZC3H6P61129 1189 aaKnown RBP23.24■■□□□ 1.31
COPE-202ENST00000349893 PDE3BQ13370 1112 aa23.24■■□□□ 1.31
COPE-202ENST00000349893 NBPF8Q3BBV2 869 aa23.24■■□□□ 1.31
COPE-202ENST00000349893 NBPF14Q5TI25 921 aa23.24■■□□□ 1.31
COPE-202ENST00000349893 NUDT16Q96DE0 195 aaKnown RBP23.24■■□□□ 1.31
COPE-202ENST00000349893 STAC3Q96MF2 364 aa23.24■■□□□ 1.31
COPE-202ENST00000349893 PARP4Q9UKK3 1724 aaKnown RBP23.23■■□□□ 1.31
COPE-202ENST00000349893 NINLQ9Y2I6 1382 aa23.23■■□□□ 1.31
COPE-202ENST00000349893 RGPD3A6NKT7 1758 aaPredicted RBP23.22■■□□□ 1.31
COPE-202ENST00000349893 RGPD4Q7Z3J3 1758 aa23.22■■□□□ 1.31
COPE-202ENST00000349893 TCP11L2Q8N4U5 519 aa23.22■■□□□ 1.31
COPE-202ENST00000349893 LARP1Q6PKG0 1096 aaKnown RBP23.21■■□□□ 1.31
COPE-202ENST00000349893 SPON1Q9HCB6 807 aa23.21■■□□□ 1.31
COPE-202ENST00000349893 USP35Q9P2H5 1018 aa23.21■■□□□ 1.31
COPE-202ENST00000349893 THRAP3Q9Y2W1 955 aaKnown RBP23.21■■□□□ 1.31
COPE-202ENST00000349893 USP19O94966 1318 aa23.21■■□□□ 1.31
COPE-202ENST00000349893 C11orf95C9JLR9 678 aaPredicted RBP23.2■■□□□ 1.3
COPE-202ENST00000349893 PEAK1Q9H792 1746 aa23.19■■□□□ 1.3
COPE-202ENST00000349893 KCNQ2O43526 872 aa23.19■■□□□ 1.3
COPE-202ENST00000349893 EVA1CP58658 441 aa23.19■■□□□ 1.3
COPE-202ENST00000349893 ACEP12821 1306 aa23.17■■□□□ 1.3
COPE-202ENST00000349893 PLEKHG3A1L390 1219 aa23.17■■□□□ 1.3
COPE-202ENST00000349893 NUTM2GQ5VZR2 741 aa23.17■■□□□ 1.3
COPE-202ENST00000349893 DCAF11Q8TEB1 546 aa23.17■■□□□ 1.3
COPE-202ENST00000349893 CCDC61Q9Y6R9 512 aa23.16■■□□□ 1.3
COPE-202ENST00000349893 COL5A2P05997 1499 aaPredicted RBP23.16■■□□□ 1.3
COPE-202ENST00000349893 CDK19Q9BWU1 502 aa23.15■■□□□ 1.3
COPE-202ENST00000349893 CASZ1Q86V15 1759 aa23.14■■□□□ 1.3
COPE-202ENST00000349893 PPP1R1BQ9UD71 204 aaPredicted RBP23.14■■□□□ 1.29
COPE-202ENST00000349893 KDM2AQ9Y2K7 1162 aa23.14■■□□□ 1.29
COPE-202ENST00000349893 SBF2Q86WG5 1849 aa23.13■■□□□ 1.29
COPE-202ENST00000349893 PLSCR1O15162 318 aa23.13■■□□□ 1.29
COPE-202ENST00000349893 OVOS2A0A0G2JMS6 1433 aa23.13■■□□□ 1.29
COPE-202ENST00000349893 OVOS2A0A0J9YW53 1432 aa23.13■■□□□ 1.29
COPE-202ENST00000349893 OVOS2Q6IE36 1432 aa23.13■■□□□ 1.29
COPE-202ENST00000349893 ABTB2Q8N961 1025 aa23.12■■□□□ 1.29
COPE-202ENST00000349893 UTRNP46939 3433 aa23.12■■□□□ 1.29
COPE-202ENST00000349893 RAB3GAP2Q9H2M9 1393 aa23.12■■□□□ 1.29
COPE-202ENST00000349893 CRB1P82279 1406 aa23.11■■□□□ 1.29
COPE-202ENST00000349893 LRRC37A3O60309 1634 aa23.11■■□□□ 1.29
COPE-202ENST00000349893 DCAF8L1A6NGE4 600 aa23.09■■□□□ 1.29
COPE-202ENST00000349893 GCP02774 474 aa23.09■■□□□ 1.29
COPE-202ENST00000349893 BRD4O60885 1362 aaPredicted RBP23.09■■□□□ 1.29
COPE-202ENST00000349893 NLRP13Q86W25 1043 aa23.08■■□□□ 1.29
COPE-202ENST00000349893 BCL9O00512 1426 aa23.08■■□□□ 1.28
COPE-202ENST00000349893 ANO8Q9HCE9 1232 aaPredicted RBP23.07■■□□□ 1.28
COPE-202ENST00000349893 KIAA1210Q9ULL0 1709 aa23.07■■□□□ 1.28
COPE-202ENST00000349893 AATKQ6ZMQ8 1374 aa23.05■■□□□ 1.28
COPE-202ENST00000349893 SLIT3O75094 1523 aa23.05■■□□□ 1.28
COPE-202ENST00000349893 WNK3Q9BYP7 1800 aa23.04■■□□□ 1.28
COPE-202ENST00000349893 BCL11BQ9C0K0 894 aaPredicted RBP23.04■■□□□ 1.28
COPE-202ENST00000349893 COL18A1P39060 1754 aa23.02■■□□□ 1.28
COPE-202ENST00000349893 PPIP5K1Q6PFW1 1433 aa23.02■■□□□ 1.28
COPE-202ENST00000349893 PROM2Q8N271 834 aa23.02■■□□□ 1.28
COPE-202ENST00000349893 MYOM1P52179 1685 aa23.01■■□□□ 1.27
COPE-202ENST00000349893 PTGER2P43116 358 aa23.01■■□□□ 1.27
COPE-202ENST00000349893 DDB1Q16531 1140 aa23.01■■□□□ 1.27
COPE-202ENST00000349893 PTF1AQ7RTS3 328 aa23■■□□□ 1.27
COPE-202ENST00000349893 PDGFDQ9GZP0 370 aaPredicted RBP22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms