RNA–Protein interactions for RNA: ENST00000349157.10

PUF60-202, Transcript of poly(U) binding splicing factor 60, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PUF60, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-202ENST00000349157 PTPRUQ92729 1446 aa25.59■■□□□ 1.69
PUF60-202ENST00000349157 PLEKHG3A1L390 1219 aa25.59■■□□□ 1.69
PUF60-202ENST00000349157 WDR63Q8IWG1 891 aa25.59■■□□□ 1.69
PUF60-202ENST00000349157 SETD1BQ9UPS6 1966 aaKnown RBP25.59■■□□□ 1.69
PUF60-202ENST00000349157 TOPAZ1Q8N9V7 1692 aa25.58■■□□□ 1.69
PUF60-202ENST00000349157 AMOTL2Q9Y2J4 779 aa25.58■■□□□ 1.69
PUF60-202ENST00000349157 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.58■■□□□ 1.69
PUF60-202ENST00000349157 NKTRP30414 1462 aaKnown RBP25.58■■□□□ 1.69
PUF60-202ENST00000349157 PHF23Q9BUL5 403 aaPredicted RBP25.58■■□□□ 1.68
PUF60-202ENST00000349157 XRN1Q8IZH2 1706 aaKnown RBP25.57■■□□□ 1.68
PUF60-202ENST00000349157 SLC26A8Q96RN1 970 aa25.56■■□□□ 1.68
PUF60-202ENST00000349157 U2AF1L5P0DN76 240 aaPredicted RBP25.56■■□□□ 1.68
PUF60-202ENST00000349157 U2AF1Q01081 240 aaKnown RBP eCLIP25.56■■□□□ 1.68
PUF60-202ENST00000349157 AEBP2Q6ZN18 517 aaPredicted RBP25.55■■□□□ 1.68
PUF60-202ENST00000349157 WWC1Q8IX03 1113 aa25.55■■□□□ 1.68
PUF60-202ENST00000349157 DIAPH1O60610 1272 aaKnown RBP25.54■■□□□ 1.68
PUF60-202ENST00000349157 ANKLE2Q86XL3 938 aa25.54■■□□□ 1.68
PUF60-202ENST00000349157 TCP11L2Q8N4U5 519 aa25.54■■□□□ 1.68
PUF60-202ENST00000349157 COG3Q96JB2 828 aa25.52■■□□□ 1.68
PUF60-202ENST00000349157 ANKARQ7Z5J8 1434 aa25.52■■□□□ 1.68
PUF60-202ENST00000349157 CCDC136Q96JN2 1154 aa25.51■■□□□ 1.67
PUF60-202ENST00000349157 PRR36Q9H6K5 1346 aa25.51■■□□□ 1.67
PUF60-202ENST00000349157 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.51■■□□□ 1.67
PUF60-202ENST00000349157 CDK12Q9NYV4 1490 aaPredicted RBP25.5■■□□□ 1.67
PUF60-202ENST00000349157 TSHZ2Q9NRE2 1034 aa25.49■■□□□ 1.67
PUF60-202ENST00000349157 FCHSD2O94868 740 aa25.48■■□□□ 1.67
PUF60-202ENST00000349157 NRKQ7Z2Y5 1582 aa25.47■■□□□ 1.67
PUF60-202ENST00000349157 MAPK8IP3Q9UPT6 1336 aa25.47■■□□□ 1.67
PUF60-202ENST00000349157 B4GALNT3Q6L9W6 998 aa25.47■■□□□ 1.67
PUF60-202ENST00000349157 PLPPR3Q6T4P5 718 aa25.47■■□□□ 1.67
PUF60-202ENST00000349157 POLKQ9UBT6 870 aa25.47■■□□□ 1.67
PUF60-202ENST00000349157 TTC21AQ8NDW8 1320 aa25.47■■□□□ 1.67
PUF60-202ENST00000349157 NEFMP07197 916 aa25.47■■□□□ 1.67
PUF60-202ENST00000349157 MYH16Q9H6N6 1097 aa25.46■■□□□ 1.67
PUF60-202ENST00000349157 USP6P35125 1406 aa25.45■■□□□ 1.67
PUF60-202ENST00000349157 PLEKHF1Q96S99 279 aa25.45■■□□□ 1.66
PUF60-202ENST00000349157 U2SURPO15042 1029 aaKnown RBP25.44■■□□□ 1.66
PUF60-202ENST00000349157 CT47B1P0C2W7 299 aaPredicted RBP25.44■■□□□ 1.66
PUF60-202ENST00000349157 ACEP12821 1306 aa25.43■■□□□ 1.66
PUF60-202ENST00000349157 IL16Q14005 1332 aa25.43■■□□□ 1.66
PUF60-202ENST00000349157 TTC21BQ7Z4L5 1316 aa25.43■■□□□ 1.66
PUF60-202ENST00000349157 MAP2P11137 1827 aaKnown RBP25.43■■□□□ 1.66
PUF60-202ENST00000349157 NME9Q86XW9 330 aa25.42■■□□□ 1.66
PUF60-202ENST00000349157 SSH2Q76I76 1423 aa25.4■■□□□ 1.66
PUF60-202ENST00000349157 CHD2O14647 1828 aaKnown RBP25.4■■□□□ 1.66
PUF60-202ENST00000349157 OVOS2A0A0J9YW53 1432 aa25.39■■□□□ 1.66
PUF60-202ENST00000349157 OVOS2Q6IE36 1432 aa25.39■■□□□ 1.66
PUF60-202ENST00000349157 TMPOP42166 694 aaKnown RBP25.38■■□□□ 1.65
PUF60-202ENST00000349157 SPINK5Q9NQ38 1064 aaPredicted RBP25.38■■□□□ 1.65
PUF60-202ENST00000349157 USP31Q70CQ4 1352 aa25.38■■□□□ 1.65
PUF60-202ENST00000349157 EXOC6Q8TAG9 804 aa25.37■■□□□ 1.65
PUF60-202ENST00000349157 KCNA6P17658 529 aa25.36■■□□□ 1.65
PUF60-202ENST00000349157 FMN2Q9NZ56 1722 aa25.36■■□□□ 1.65
PUF60-202ENST00000349157 NALCNQ8IZF0 1738 aa25.35■■□□□ 1.65
PUF60-202ENST00000349157 NCKAP5LQ9HCH0 1330 aa25.35■■□□□ 1.65
PUF60-202ENST00000349157 LRRC7Q96NW7 1537 aa25.35■■□□□ 1.65
PUF60-202ENST00000349157 NEUROD2Q15784 382 aa25.35■■□□□ 1.65
PUF60-202ENST00000349157 CALD1Q05682 793 aaKnown RBP25.34■■□□□ 1.65
PUF60-202ENST00000349157 NPHP4O75161 1426 aaPredicted RBP25.33■■□□□ 1.65
PUF60-202ENST00000349157 IL13P35225 146 aa25.33■■□□□ 1.65
PUF60-202ENST00000349157 AAMPQ13685 434 aa25.33■■□□□ 1.65
PUF60-202ENST00000349157 PDE3AQ14432 1141 aa25.33■■□□□ 1.65
PUF60-202ENST00000349157 RRP7AQ9Y3A4 280 aaKnown RBP25.33■■□□□ 1.65
PUF60-202ENST00000349157 RSPH6AQ9H0K4 717 aa25.33■■□□□ 1.64
PUF60-202ENST00000349157 PPM1GO15355 546 aaPredicted RBP25.31■■□□□ 1.64
PUF60-202ENST00000349157 NGDNQ8NEJ9 315 aaKnown RBP25.31■■□□□ 1.64
PUF60-202ENST00000349157 DMRT2Q9Y5R5 561 aa25.3■■□□□ 1.64
PUF60-202ENST00000349157 EMILIN1Q9Y6C2 1016 aa25.3■■□□□ 1.64
PUF60-202ENST00000349157 CRBNQ96SW2 442 aa25.3■■□□□ 1.64
PUF60-202ENST00000349157 PLIN1O60240 522 aa25.29■■□□□ 1.64
PUF60-202ENST00000349157 LMOD3Q0VAK6 560 aa25.29■■□□□ 1.64
PUF60-202ENST00000349157 KIF24Q5T7B8 1368 aa25.28■■□□□ 1.64
PUF60-202ENST00000349157 RIPK4P57078 832 aa25.28■■□□□ 1.64
PUF60-202ENST00000349157 TRIM35Q9UPQ4 493 aa25.28■■□□□ 1.64
PUF60-202ENST00000349157 USP54Q70EL1 1684 aa25.28■■□□□ 1.64
PUF60-202ENST00000349157 ADGRL3Q9HAR2 1447 aa25.27■■□□□ 1.64
PUF60-202ENST00000349157 PRKAR2BP31323 418 aa25.26■■□□□ 1.63
PUF60-202ENST00000349157 NFE2L2Q16236 605 aa25.26■■□□□ 1.63
PUF60-202ENST00000349157 ZRANB1Q9UGI0 708 aa25.26■■□□□ 1.63
PUF60-202ENST00000349157 NWD1Q149M9 1564 aa25.25■■□□□ 1.63
PUF60-202ENST00000349157 MS4A1P11836 297 aa25.25■■□□□ 1.63
PUF60-202ENST00000349157 ZNF428Q96B54 188 aa25.24■■□□□ 1.63
PUF60-202ENST00000349157 RARSP54136 660 aaKnown RBP25.23■■□□□ 1.63
PUF60-202ENST00000349157 NUTM2FA1L443 756 aa25.23■■□□□ 1.63
PUF60-202ENST00000349157 RGPD8O14715 1765 aaPredicted RBP25.21■■□□□ 1.63
PUF60-202ENST00000349157 SBNO1A3KN83 1393 aa25.21■■□□□ 1.63
PUF60-202ENST00000349157 RRS1Q15050 365 aaKnown RBP25.21■■□□□ 1.63
PUF60-202ENST00000349157 PMFBP1Q8TBY8 1022 aa25.21■■□□□ 1.63
PUF60-202ENST00000349157 FANCIQ9NVI1 1328 aa25.2■■□□□ 1.63
PUF60-202ENST00000349157 BCAR3O75815 825 aa25.2■■□□□ 1.62
PUF60-202ENST00000349157 CANXP27824 592 aaKnown RBP25.2■■□□□ 1.62
PUF60-202ENST00000349157 RBM19Q9Y4C8 960 aaKnown RBP25.2■■□□□ 1.62
PUF60-202ENST00000349157 FLT4P35916 1363 aa25.19■■□□□ 1.62
PUF60-202ENST00000349157 C20orf194Q5TEA3 1177 aa25.18■■□□□ 1.62
PUF60-202ENST00000349157 CENPQQ7L2Z9 268 aaPredicted RBP25.18■■□□□ 1.62
PUF60-202ENST00000349157 TCERG1O14776 1098 aaKnown RBP25.17■■□□□ 1.62
PUF60-202ENST00000349157 FBLN1P23142 703 aa25.17■■□□□ 1.62
PUF60-202ENST00000349157 PHF8Q9UPP1 1060 aa25.17■■□□□ 1.62
PUF60-202ENST00000349157 PIK3C2AO00443 1686 aa25.16■■□□□ 1.62
PUF60-202ENST00000349157 ARHGEF10O15013 1369 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms