RNA–Protein interactions for RNA: ENST00000345057.8

TRADD-201, Transcript of TNFRSF1A associated via death domain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRADD, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-201ENST00000345057 RUNDC1Q96C34 613 aa33.33■■■□□ 2.93
TRADD-201ENST00000345057 AATKQ6ZMQ8 1374 aa33.32■■■□□ 2.93
TRADD-201ENST00000345057 PNPLA6Q8IY17 1366 aa33.32■■■□□ 2.93
TRADD-201ENST00000345057 USP6P35125 1406 aa33.32■■■□□ 2.93
TRADD-201ENST00000345057 COL3A1P02461 1466 aaPredicted RBP33.32■■■□□ 2.92
TRADD-201ENST00000345057 NKTRP30414 1462 aaKnown RBP33.32■■■□□ 2.92
TRADD-201ENST00000345057 FMN2Q9NZ56 1722 aa33.31■■■□□ 2.92
TRADD-201ENST00000345057 ZNF521Q96K83 1311 aa33.31■■■□□ 2.92
TRADD-201ENST00000345057 APAF1O14727 1248 aa33.31■■■□□ 2.92
TRADD-201ENST00000345057 NME9Q86XW9 330 aa33.3■■■□□ 2.92
TRADD-201ENST00000345057 RNF123Q5XPI4 1314 aa33.29■■■□□ 2.92
TRADD-201ENST00000345057 TTC21BQ7Z4L5 1316 aa33.29■■■□□ 2.92
TRADD-201ENST00000345057 NUTM2FA1L443 756 aa33.29■■■□□ 2.92
TRADD-201ENST00000345057 HSPA2P54652 639 aa33.28■■■□□ 2.92
TRADD-201ENST00000345057 GOLGA2Q08379 1002 aa33.28■■■□□ 2.92
TRADD-201ENST00000345057 NCBP3Q53F19 620 aaKnown RBP33.28■■■□□ 2.92
TRADD-201ENST00000345057 NWD1Q149M9 1564 aa33.27■■■□□ 2.92
TRADD-201ENST00000345057 TTC21AQ8NDW8 1320 aa33.27■■■□□ 2.92
TRADD-201ENST00000345057 U2AF1L5P0DN76 240 aaPredicted RBP33.26■■■□□ 2.91
TRADD-201ENST00000345057 U2AF1Q01081 240 aaKnown RBP eCLIP33.26■■■□□ 2.91
TRADD-201ENST00000345057 DIAPH1O60610 1272 aaKnown RBP33.25■■■□□ 2.91
TRADD-201ENST00000345057 PELP1Q8IZL8 1130 aaKnown RBP33.25■■■□□ 2.91
TRADD-201ENST00000345057 NALCNQ8IZF0 1738 aa33.25■■■□□ 2.91
TRADD-201ENST00000345057 CDCA7LQ96GN5 454 aa33.25■■■□□ 2.91
TRADD-201ENST00000345057 PNNQ9H307 717 aaKnown RBP33.25■■■□□ 2.91
TRADD-201ENST00000345057 POLKQ9UBT6 870 aa33.24■■■□□ 2.91
TRADD-201ENST00000345057 ADGRL3Q9HAR2 1447 aa33.24■■■□□ 2.91
TRADD-201ENST00000345057 NGDNQ8NEJ9 315 aaKnown RBP33.23■■■□□ 2.91
TRADD-201ENST00000345057 SSH2Q76I76 1423 aa33.23■■■□□ 2.91
TRADD-201ENST00000345057 IQSEC2Q5JU85 1478 aa33.22■■■□□ 2.91
TRADD-201ENST00000345057 CDK12Q9NYV4 1490 aaPredicted RBP33.22■■■□□ 2.91
TRADD-201ENST00000345057 RCAN3Q9UKA8 241 aa33.21■■■□□ 2.91
TRADD-201ENST00000345057 MAP2P11137 1827 aaKnown RBP33.21■■■□□ 2.91
TRADD-201ENST00000345057 RGPD8O14715 1765 aaPredicted RBP33.2■■■□□ 2.9
TRADD-201ENST00000345057 OVOS2A0A0J9YW53 1432 aa33.19■■■□□ 2.9
TRADD-201ENST00000345057 OVOS2Q6IE36 1432 aa33.19■■■□□ 2.9
TRADD-201ENST00000345057 U2SURPO15042 1029 aaKnown RBP33.18■■■□□ 2.9
TRADD-201ENST00000345057 PMFBP1Q8TBY8 1022 aa33.18■■■□□ 2.9
TRADD-201ENST00000345057 TCP11L2Q8N4U5 519 aa33.16■■■□□ 2.9
TRADD-201ENST00000345057 CCDC27Q2M243 656 aa33.16■■■□□ 2.9
TRADD-201ENST00000345057 E9PSI1 815 aa33.15■■■□□ 2.9
TRADD-201ENST00000345057 SLFN5Q08AF3 891 aa33.15■■■□□ 2.9
TRADD-201ENST00000345057 ZRANB1Q9UGI0 708 aa33.14■■■□□ 2.9
TRADD-201ENST00000345057 PPM1GO15355 546 aaPredicted RBP33.13■■■□□ 2.89
TRADD-201ENST00000345057 IRX6P78412 446 aaPredicted RBP33.13■■■□□ 2.89
TRADD-201ENST00000345057 DUSP27Q5VZP5 1158 aa33.13■■■□□ 2.89
TRADD-201ENST00000345057 USP31Q70CQ4 1352 aa33.12■■■□□ 2.89
TRADD-201ENST00000345057 WWC1Q8IX03 1113 aa33.12■■■□□ 2.89
TRADD-201ENST00000345057 MAPK8IP3Q9UPT6 1336 aa33.11■■■□□ 2.89
TRADD-201ENST00000345057 TRMT2AQ8IZ69 625 aaKnown RBP33.11■■■□□ 2.89
TRADD-201ENST00000345057 FCHSD2O94868 740 aa33.1■■■□□ 2.89
TRADD-201ENST00000345057 PHF23Q9BUL5 403 aaPredicted RBP33.1■■■□□ 2.89
TRADD-201ENST00000345057 EMILIN1Q9Y6C2 1016 aa33.1■■■□□ 2.89
TRADD-201ENST00000345057 C14orf37Q86TY3 774 aa33.09■■■□□ 2.89
TRADD-201ENST00000345057 WDR63Q8IWG1 891 aa33.08■■■□□ 2.89
TRADD-201ENST00000345057 PPP4R2Q9NY27 417 aa33.08■■■□□ 2.89
TRADD-201ENST00000345057 RRP1P56182 461 aaKnown RBP33.08■■■□□ 2.89
TRADD-201ENST00000345057 PLEKHF1Q96S99 279 aa33.08■■■□□ 2.89
TRADD-201ENST00000345057 PHF8Q9UPP1 1060 aa33.07■■■□□ 2.88
TRADD-201ENST00000345057 NEFMP07197 916 aa33.06■■■□□ 2.88
TRADD-201ENST00000345057 PROSER2Q86WR7 435 aaPredicted RBP33.05■■■□□ 2.88
TRADD-201ENST00000345057 LRRC7Q96NW7 1537 aa33.04■■■□□ 2.88
TRADD-201ENST00000345057 FBLN1P23142 703 aa33.04■■■□□ 2.88
TRADD-201ENST00000345057 RRS1Q15050 365 aaKnown RBP33.03■■■□□ 2.88
TRADD-201ENST00000345057 IL13P35225 146 aa33.02■■■□□ 2.88
TRADD-201ENST00000345057 NEUROD2Q15784 382 aa33.02■■■□□ 2.88
TRADD-201ENST00000345057 USP54Q70EL1 1684 aa33.01■■■□□ 2.88
TRADD-201ENST00000345057 NCOA3Q9Y6Q9 1424 aa33.01■■■□□ 2.88
TRADD-201ENST00000345057 PIK3C2AO00443 1686 aa33.01■■■□□ 2.87
TRADD-201ENST00000345057 RRP7AQ9Y3A4 280 aaKnown RBP33■■■□□ 2.87
TRADD-201ENST00000345057 RBM33Q96EV2 1170 aaKnown RBP32.98■■■□□ 2.87
TRADD-201ENST00000345057 TMPOP42166 694 aaKnown RBP32.97■■■□□ 2.87
TRADD-201ENST00000345057 RSPH6AQ9H0K4 717 aa32.97■■■□□ 2.87
TRADD-201ENST00000345057 C19orf44Q9H6X5 657 aa32.97■■■□□ 2.87
TRADD-201ENST00000345057 ESCO1Q5FWF5 840 aa32.96■■■□□ 2.87
TRADD-201ENST00000345057 NLRP6P59044 892 aa32.94■■■□□ 2.86
TRADD-201ENST00000345057 SPINK5Q9NQ38 1064 aaPredicted RBP32.94■■■□□ 2.86
TRADD-201ENST00000345057 KIF24Q5T7B8 1368 aa32.93■■■□□ 2.86
TRADD-201ENST00000345057 MYH16Q9H6N6 1097 aa32.93■■■□□ 2.86
TRADD-201ENST00000345057 DCCP43146 1447 aa32.93■■■□□ 2.86
TRADD-201ENST00000345057 GOLGA6L2Q8N9W4 650 aaPredicted RBP32.93■■■□□ 2.86
TRADD-201ENST00000345057 PRKAR2BP31323 418 aa32.92■■■□□ 2.86
TRADD-201ENST00000345057 SBNO1A3KN83 1393 aa32.91■■■□□ 2.86
TRADD-201ENST00000345057 ABTB2Q8N961 1025 aa32.91■■■□□ 2.86
TRADD-201ENST00000345057 STRCQ7RTU9 1775 aa32.91■■■□□ 2.86
TRADD-201ENST00000345057 FLT4P35916 1363 aa32.9■■■□□ 2.86
TRADD-201ENST00000345057 PSME1Q06323 249 aa32.9■■■□□ 2.86
TRADD-201ENST00000345057 DMRT2Q9Y5R5 561 aa32.9■■■□□ 2.86
TRADD-201ENST00000345057 KIF1AQ12756 1690 aa32.89■■■□□ 2.86
TRADD-201ENST00000345057 IL16Q14005 1332 aa32.89■■■□□ 2.86
TRADD-201ENST00000345057 PAK3O75914 559 aaPredicted RBP32.89■■■□□ 2.86
TRADD-201ENST00000345057 RIPK4P57078 832 aa32.88■■■□□ 2.85
TRADD-201ENST00000345057 PEAK1Q9H792 1746 aa32.87■■■□□ 2.85
TRADD-201ENST00000345057 MAP3K19Q56UN5 1328 aa32.87■■■□□ 2.85
TRADD-201ENST00000345057 EIF4A2Q14240 407 aaKnown RBP32.86■■■□□ 2.85
TRADD-201ENST00000345057 TMEM94Q12767 1356 aa32.86■■■□□ 2.85
TRADD-201ENST00000345057 HMOX1P09601 288 aa32.85■■■□□ 2.85
TRADD-201ENST00000345057 ATF3P18847 181 aa32.84■■■□□ 2.85
TRADD-201ENST00000345057 TRIM35Q9UPQ4 493 aa32.84■■■□□ 2.85
TRADD-201ENST00000345057 MARF1Q9Y4F3 1742 aaKnown RBP32.84■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms