RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 SEPT12Q8IYM1 358 aa25.75■■□□□ 1.71
USF2-202ENST00000343550 CDK19Q9BWU1 502 aa25.75■■□□□ 1.71
USF2-202ENST00000343550 ONECUT3O60422 494 aaPredicted RBP25.74■■□□□ 1.71
USF2-202ENST00000343550 NWD2Q9ULI1 1742 aa25.74■■□□□ 1.71
USF2-202ENST00000343550 PLCH1Q4KWH8 1693 aa25.73■■□□□ 1.71
USF2-202ENST00000343550 ALS2Q96Q42 1657 aa25.73■■□□□ 1.71
USF2-202ENST00000343550 ATP7BP35670 1465 aa25.73■■□□□ 1.71
USF2-202ENST00000343550 CCER1Q8TC90 406 aaPredicted RBP25.72■■□□□ 1.71
USF2-202ENST00000343550 BTG4Q9NY30 223 aa25.72■■□□□ 1.71
USF2-202ENST00000343550 TRPM1Q7Z4N2 1603 aa25.71■■□□□ 1.71
USF2-202ENST00000343550 ROCK2O75116 1388 aaKnown RBP25.68■■□□□ 1.7
USF2-202ENST00000343550 CCDC61Q9Y6R9 512 aa25.68■■□□□ 1.7
USF2-202ENST00000343550 ZRANB1Q9UGI0 708 aa25.67■■□□□ 1.7
USF2-202ENST00000343550 TIMELESSQ9UNS1 1208 aa25.67■■□□□ 1.7
USF2-202ENST00000343550 ITSN1Q15811 1721 aa25.66■■□□□ 1.7
USF2-202ENST00000343550 KRT27Q7Z3Y8 459 aa25.66■■□□□ 1.7
USF2-202ENST00000343550 BLMP54132 1417 aaPredicted RBP25.66■■□□□ 1.7
USF2-202ENST00000343550 ACEP12821 1306 aa25.65■■□□□ 1.7
USF2-202ENST00000343550 BRWD3Q6RI45 1802 aa25.65■■□□□ 1.7
USF2-202ENST00000343550 POLR3AO14802 1390 aaPredicted RBP25.65■■□□□ 1.7
USF2-202ENST00000343550 PLEKHG3A1L390 1219 aa25.64■■□□□ 1.7
USF2-202ENST00000343550 FAM98CQ17RN3 349 aaKnown RBP25.64■■□□□ 1.7
USF2-202ENST00000343550 PRDM11Q9NQV5 511 aa25.64■■□□□ 1.7
USF2-202ENST00000343550 COL14A1Q05707 1796 aaKnown RBP25.64■■□□□ 1.69
USF2-202ENST00000343550 A0A0G2JS52 829 aa25.63■■□□□ 1.69
USF2-202ENST00000343550 MYT1Q01538 1121 aa25.63■■□□□ 1.69
USF2-202ENST00000343550 NRAPQ86VF7 1730 aa25.62■■□□□ 1.69
USF2-202ENST00000343550 CENPJQ9HC77 1338 aaPredicted RBP25.62■■□□□ 1.69
USF2-202ENST00000343550 SRCAPQ6ZRS2 3230 aa25.61■■□□□ 1.69
USF2-202ENST00000343550 NUTM2GQ5VZR2 741 aa25.61■■□□□ 1.69
USF2-202ENST00000343550 CRYBG1Q9Y4K1 1723 aa25.6■■□□□ 1.69
USF2-202ENST00000343550 SRPK2P78362 688 aaKnown RBP25.6■■□□□ 1.69
USF2-202ENST00000343550 SF3B2Q13435 895 aaKnown RBP25.6■■□□□ 1.69
USF2-202ENST00000343550 CARD11Q9BXL7 1154 aa25.6■■□□□ 1.69
USF2-202ENST00000343550 SPATA31A5Q5VU36 1347 aa25.6■■□□□ 1.69
USF2-202ENST00000343550 SPATA31A7Q8IWB4 1347 aa25.6■■□□□ 1.69
USF2-202ENST00000343550 KIAA0232Q92628 1395 aa25.59■■□□□ 1.69
USF2-202ENST00000343550 DEFB132Q7Z7B7 95 aa25.58■■□□□ 1.69
USF2-202ENST00000343550 TOPAZ1Q8N9V7 1692 aa25.58■■□□□ 1.69
USF2-202ENST00000343550 CHRNA2Q15822 529 aa25.58■■□□□ 1.68
USF2-202ENST00000343550 ZC3H6P61129 1189 aaKnown RBP25.57■■□□□ 1.68
USF2-202ENST00000343550 ABTB2Q8N961 1025 aa25.57■■□□□ 1.68
USF2-202ENST00000343550 CABP2Q9NPB3 220 aa25.57■■□□□ 1.68
USF2-202ENST00000343550 PPIP5K1Q6PFW1 1433 aa25.54■■□□□ 1.68
USF2-202ENST00000343550 STRN4Q9NRL3 753 aa25.53■■□□□ 1.68
USF2-202ENST00000343550 SPATA31A1Q5TZJ5 1347 aa25.52■■□□□ 1.68
USF2-202ENST00000343550 PHRF1Q9P1Y6 1649 aaKnown RBP25.51■■□□□ 1.67
USF2-202ENST00000343550 QRICH2Q9H0J4 1663 aa25.49■■□□□ 1.67
USF2-202ENST00000343550 NLRP13Q86W25 1043 aa25.49■■□□□ 1.67
USF2-202ENST00000343550 CABP1Q9NZU7 370 aa25.49■■□□□ 1.67
USF2-202ENST00000343550 EVA1CP58658 441 aa25.48■■□□□ 1.67
USF2-202ENST00000343550 FAM182BQ5T319 152 aa25.48■■□□□ 1.67
USF2-202ENST00000343550 USP19O94966 1318 aa25.48■■□□□ 1.67
USF2-202ENST00000343550 BRD4O60885 1362 aaPredicted RBP25.47■■□□□ 1.67
USF2-202ENST00000343550 CPDO75976 1380 aa25.46■■□□□ 1.67
USF2-202ENST00000343550 GCP02774 474 aa25.46■■□□□ 1.67
USF2-202ENST00000343550 BAG6P46379 1132 aa25.46■■□□□ 1.67
USF2-202ENST00000343550 EVC2Q86UK5 1308 aa25.45■■□□□ 1.67
USF2-202ENST00000343550 THSD7AQ9UPZ6 1657 aa25.45■■□□□ 1.66
USF2-202ENST00000343550 USP35Q9P2H5 1018 aa25.44■■□□□ 1.66
USF2-202ENST00000343550 NRKQ7Z2Y5 1582 aa25.43■■□□□ 1.66
USF2-202ENST00000343550 SSH2Q76I76 1423 aa25.43■■□□□ 1.66
USF2-202ENST00000343550 CAMTA1Q9Y6Y1 1673 aa25.42■■□□□ 1.66
USF2-202ENST00000343550 USP6P35125 1406 aa25.42■■□□□ 1.66
USF2-202ENST00000343550 LARP1Q6PKG0 1096 aaKnown RBP25.42■■□□□ 1.66
USF2-202ENST00000343550 BARGINQ6ZT62 677 aa25.42■■□□□ 1.66
USF2-202ENST00000343550 NLRP6P59044 892 aa25.41■■□□□ 1.66
USF2-202ENST00000343550 SBNO2Q9Y2G9 1366 aa25.41■■□□□ 1.66
USF2-202ENST00000343550 ST20-MTHFSA0A0A6YYL1 179 aa25.4■■□□□ 1.66
USF2-202ENST00000343550 EN1Q05925 392 aaPredicted RBP25.39■■□□□ 1.66
USF2-202ENST00000343550 FAM196AQ6ZSG2 479 aa25.38■■□□□ 1.65
USF2-202ENST00000343550 TCP11L2Q8N4U5 519 aa25.37■■□□□ 1.65
USF2-202ENST00000343550 LMO7Q8WWI1 1683 aa25.37■■□□□ 1.65
USF2-202ENST00000343550 TESK2Q96S53 571 aa25.36■■□□□ 1.65
USF2-202ENST00000343550 ZNF692Q9BU19 519 aaPredicted RBP25.36■■□□□ 1.65
USF2-202ENST00000343550 PDE3BQ13370 1112 aa25.35■■□□□ 1.65
USF2-202ENST00000343550 THRAP3Q9Y2W1 955 aaKnown RBP25.35■■□□□ 1.65
USF2-202ENST00000343550 RGPD1P0DJD0 1748 aa25.34■■□□□ 1.65
USF2-202ENST00000343550 ZBTB7CA1YPR0 619 aa25.34■■□□□ 1.65
USF2-202ENST00000343550 USP47Q96K76 1375 aa25.34■■□□□ 1.65
USF2-202ENST00000343550 TRIM37O94972 964 aa25.33■■□□□ 1.65
USF2-202ENST00000343550 COL5A2P05997 1499 aaPredicted RBP25.32■■□□□ 1.64
USF2-202ENST00000343550 DISP2A7MBM2 1401 aa25.32■■□□□ 1.64
USF2-202ENST00000343550 AATKQ6ZMQ8 1374 aa25.32■■□□□ 1.64
USF2-202ENST00000343550 PSDA5PKW4 1024 aaPredicted RBP25.32■■□□□ 1.64
USF2-202ENST00000343550 SLC24A1O60721 1099 aa25.32■■□□□ 1.64
USF2-202ENST00000343550 SLIT3O75094 1523 aa25.31■■□□□ 1.64
USF2-202ENST00000343550 TTC21BQ7Z4L5 1316 aa25.31■■□□□ 1.64
USF2-202ENST00000343550 EZH2Q15910 746 aaKnown RBP25.29■■□□□ 1.64
USF2-202ENST00000343550 CRB1P82279 1406 aa25.28■■□□□ 1.64
USF2-202ENST00000343550 PUS7Q96PZ0 661 aaKnown RBP25.28■■□□□ 1.64
USF2-202ENST00000343550 APBA3O96018 575 aa25.27■■□□□ 1.64
USF2-202ENST00000343550 CAMKK2Q96RR4 588 aa25.27■■□□□ 1.64
USF2-202ENST00000343550 PIK3C2AO00443 1686 aa25.27■■□□□ 1.64
USF2-202ENST00000343550 TTC21AQ8NDW8 1320 aa25.27■■□□□ 1.64
USF2-202ENST00000343550 TNS1Q9HBL0 1735 aaKnown RBP25.27■■□□□ 1.64
USF2-202ENST00000343550 CPSF1Q10570 1443 aaKnown RBP25.26■■□□□ 1.63
USF2-202ENST00000343550 KCNH5Q8NCM2 988 aa25.26■■□□□ 1.63
USF2-202ENST00000343550 ARHGEF25Q86VW2 580 aa25.25■■□□□ 1.63
USF2-202ENST00000343550 AXIN2Q9Y2T1 843 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms