RNA–Protein interactions for RNA: ENST00000341627.5

TNFRSF12A-202, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF12A, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-202ENST00000341627 BCL9LQ86UU0 1499 aa21.64■■□□□ 1.05
TNFRSF12A-202ENST00000341627 POLR3AO14802 1390 aaPredicted RBP21.63■■□□□ 1.05
TNFRSF12A-202ENST00000341627 ACEP12821 1306 aa21.63■■□□□ 1.05
TNFRSF12A-202ENST00000341627 PLEKHG5O94827 1062 aa21.62■■□□□ 1.05
TNFRSF12A-202ENST00000341627 PUS7Q96PZ0 661 aaKnown RBP21.62■■□□□ 1.05
TNFRSF12A-202ENST00000341627 CABP1Q9NZU7 370 aa21.62■■□□□ 1.05
TNFRSF12A-202ENST00000341627 TRPC5Q9UL62 973 aaPredicted RBP21.62■■□□□ 1.05
TNFRSF12A-202ENST00000341627 CDK12Q9NYV4 1490 aaPredicted RBP21.61■■□□□ 1.05
TNFRSF12A-202ENST00000341627 EIF4G2P78344 907 aaKnown RBP eCLIP21.61■■□□□ 1.05
TNFRSF12A-202ENST00000341627 TMF1P82094 1093 aa21.61■■□□□ 1.05
TNFRSF12A-202ENST00000341627 ATRNO75882 1429 aa21.6■■□□□ 1.05
TNFRSF12A-202ENST00000341627 PAK3O75914 559 aaPredicted RBP21.59■■□□□ 1.05
TNFRSF12A-202ENST00000341627 HAP1P54257 671 aaPredicted RBP21.59■■□□□ 1.05
TNFRSF12A-202ENST00000341627 TRPM3Q9HCF6 1732 aaPredicted RBP21.59■■□□□ 1.05
TNFRSF12A-202ENST00000341627 SLIT2O94813 1529 aa21.58■■□□□ 1.04
TNFRSF12A-202ENST00000341627 CDCA8Q53HL2 280 aa21.57■■□□□ 1.04
TNFRSF12A-202ENST00000341627 UNC5CLQ8IV45 518 aa21.57■■□□□ 1.04
TNFRSF12A-202ENST00000341627 RGS12O14924 1447 aa21.56■■□□□ 1.04
TNFRSF12A-202ENST00000341627 FAM83GA6ND36 823 aa21.56■■□□□ 1.04
TNFRSF12A-202ENST00000341627 TMC1Q8TDI8 760 aa21.55■■□□□ 1.04
TNFRSF12A-202ENST00000341627 ZNF692Q9BU19 519 aaPredicted RBP21.55■■□□□ 1.04
TNFRSF12A-202ENST00000341627 BRD4O60885 1362 aaPredicted RBP21.55■■□□□ 1.04
TNFRSF12A-202ENST00000341627 ALS2Q96Q42 1657 aa21.54■■□□□ 1.04
TNFRSF12A-202ENST00000341627 HSPA5P11021 654 aaKnown RBP21.53■■□□□ 1.04
TNFRSF12A-202ENST00000341627 GJD4Q96KN9 370 aaPredicted RBP21.53■■□□□ 1.04
TNFRSF12A-202ENST00000341627 NINLQ9Y2I6 1382 aa21.52■■□□□ 1.04
TNFRSF12A-202ENST00000341627 USP6P35125 1406 aa21.52■■□□□ 1.04
TNFRSF12A-202ENST00000341627 NUTM2GQ5VZR2 741 aa21.51■■□□□ 1.03
TNFRSF12A-202ENST00000341627 MARF1Q9Y4F3 1742 aaKnown RBP21.5■■□□□ 1.03
TNFRSF12A-202ENST00000341627 HDGFL2Q7Z4V5 671 aaPredicted RBP21.5■■□□□ 1.03
TNFRSF12A-202ENST00000341627 UPF1Q92900 1129 aaKnown RBP eCLIP21.5■■□□□ 1.037e-9■■■■■ 38.8
TNFRSF12A-202ENST00000341627 TERF2IPQ9NYB0 399 aa21.5■■□□□ 1.03
TNFRSF12A-202ENST00000341627 CPSF1Q10570 1443 aaKnown RBP21.49■■□□□ 1.03
TNFRSF12A-202ENST00000341627 ABTB2Q8N961 1025 aa21.49■■□□□ 1.03
TNFRSF12A-202ENST00000341627 SLC12A5Q9H2X9 1139 aa21.49■■□□□ 1.03
TNFRSF12A-202ENST00000341627 KTN1Q86UP2 1357 aaKnown RBP21.48■■□□□ 1.03
TNFRSF12A-202ENST00000341627 VPS72Q15906 364 aa21.48■■□□□ 1.03
TNFRSF12A-202ENST00000341627 ABCA3Q99758 1704 aa21.48■■□□□ 1.03
TNFRSF12A-202ENST00000341627 AKAP12Q02952 1782 aa21.46■■□□□ 1.03
TNFRSF12A-202ENST00000341627 BTG4Q9NY30 223 aa21.46■■□□□ 1.03
TNFRSF12A-202ENST00000341627 SSH2Q76I76 1423 aa21.46■■□□□ 1.03
TNFRSF12A-202ENST00000341627 NLRP13Q86W25 1043 aa21.44■■□□□ 1.02
TNFRSF12A-202ENST00000341627 PRDM11Q9NQV5 511 aa21.44■■□□□ 1.02
TNFRSF12A-202ENST00000341627 USP19O94966 1318 aa21.44■■□□□ 1.02
TNFRSF12A-202ENST00000341627 TTC21BQ7Z4L5 1316 aa21.44■■□□□ 1.02
TNFRSF12A-202ENST00000341627 TTC21AQ8NDW8 1320 aa21.44■■□□□ 1.02
TNFRSF12A-202ENST00000341627 KIAA0232Q92628 1395 aa21.44■■□□□ 1.02
TNFRSF12A-202ENST00000341627 CD163L1Q9NR16 1453 aa21.44■■□□□ 1.02
TNFRSF12A-202ENST00000341627 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.43■■□□□ 1.02
TNFRSF12A-202ENST00000341627 A0A1W2PP64 1363 aa21.42■■□□□ 1.02
TNFRSF12A-202ENST00000341627 ONECUT3O60422 494 aaPredicted RBP21.42■■□□□ 1.02
TNFRSF12A-202ENST00000341627 GLI3P10071 1580 aa21.42■■□□□ 1.02
TNFRSF12A-202ENST00000341627 ZC3H6P61129 1189 aaKnown RBP21.42■■□□□ 1.02
TNFRSF12A-202ENST00000341627 CRYBG1Q9Y4K1 1723 aa21.42■■□□□ 1.02
TNFRSF12A-202ENST00000341627 MON2Q7Z3U7 1717 aa21.41■■□□□ 1.02
TNFRSF12A-202ENST00000341627 NLRP6P59044 892 aa21.41■■□□□ 1.02
TNFRSF12A-202ENST00000341627 CHRNA2Q15822 529 aa21.41■■□□□ 1.02
TNFRSF12A-202ENST00000341627 POLR3GLQ9BT43 218 aa21.41■■□□□ 1.02
TNFRSF12A-202ENST00000341627 EDC4Q6P2E9 1401 aaKnown RBP21.4■■□□□ 1.02
TNFRSF12A-202ENST00000341627 ANKRD36BQ8N2N9 1353 aa21.4■■□□□ 1.02
TNFRSF12A-202ENST00000341627 GCP02774 474 aa21.4■■□□□ 1.02
TNFRSF12A-202ENST00000341627 CCDC9Q9Y3X0 531 aaKnown RBP21.4■■□□□ 1.02
TNFRSF12A-202ENST00000341627 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.39■■□□□ 1.01
TNFRSF12A-202ENST00000341627 NRKQ7Z2Y5 1582 aa21.39■■□□□ 1.01
TNFRSF12A-202ENST00000341627 NWD2Q9ULI1 1742 aa21.38■■□□□ 1.01
TNFRSF12A-202ENST00000341627 PLCH1Q4KWH8 1693 aa21.38■■□□□ 1.01
TNFRSF12A-202ENST00000341627 CPDO75976 1380 aa21.37■■□□□ 1.01
TNFRSF12A-202ENST00000341627 SEPT12Q8IYM1 358 aa21.37■■□□□ 1.01
TNFRSF12A-202ENST00000341627 COL14A1Q05707 1796 aaKnown RBP21.37■■□□□ 1.01
TNFRSF12A-202ENST00000341627 PIK3C2AO00443 1686 aa21.36■■□□□ 1.01
TNFRSF12A-202ENST00000341627 SPATA31A5Q5VU36 1347 aa21.35■■□□□ 1.01
TNFRSF12A-202ENST00000341627 SPATA31A7Q8IWB4 1347 aa21.35■■□□□ 1.01
TNFRSF12A-202ENST00000341627 PHRF1Q9P1Y6 1649 aaKnown RBP21.35■■□□□ 1.01
TNFRSF12A-202ENST00000341627 EP400Q96L91 3159 aa21.34■■□□□ 1.01
TNFRSF12A-202ENST00000341627 NRAPQ86VF7 1730 aa21.33■■□□□ 1.01
TNFRSF12A-202ENST00000341627 ZEB1P37275 1124 aaPredicted RBP21.33■■□□□ 1.01
TNFRSF12A-202ENST00000341627 FAM98CQ17RN3 349 aaKnown RBP21.33■■□□□ 1.01
TNFRSF12A-202ENST00000341627 NME9Q86XW9 330 aa21.33■■□□□ 1.01
TNFRSF12A-202ENST00000341627 USP31Q70CQ4 1352 aa21.33■■□□□ 1
TNFRSF12A-202ENST00000341627 MYOM1P52179 1685 aa21.32■■□□□ 1
TNFRSF12A-202ENST00000341627 KCNH5Q8NCM2 988 aa21.32■■□□□ 1
TNFRSF12A-202ENST00000341627 SLIT3O75094 1523 aa21.31■■□□□ 1
TNFRSF12A-202ENST00000341627 C11orf95C9JLR9 678 aaPredicted RBP21.31■■□□□ 1
TNFRSF12A-202ENST00000341627 STRN4Q9NRL3 753 aa21.31■■□□□ 1
TNFRSF12A-202ENST00000341627 SPATA31A1Q5TZJ5 1347 aa21.3■■□□□ 1
TNFRSF12A-202ENST00000341627 CAMTA1Q9Y6Y1 1673 aa21.29■■□□□ 1
TNFRSF12A-202ENST00000341627 ZRANB1Q9UGI0 708 aa21.29■■□□□ 1
TNFRSF12A-202ENST00000341627 KIF7Q2M1P5 1343 aa21.29■■□□□ 1
TNFRSF12A-202ENST00000341627 EVA1CP58658 441 aa21.28■■□□□ 1
TNFRSF12A-202ENST00000341627 AATKQ6ZMQ8 1374 aa21.27■■□□□ 1
TNFRSF12A-202ENST00000341627 LARP1Q6PKG0 1096 aaKnown RBP21.27■■□□□ 1
TNFRSF12A-202ENST00000341627 KRT27Q7Z3Y8 459 aa21.27■■□□□ 1
TNFRSF12A-202ENST00000341627 COG3Q96JB2 828 aa21.27■■□□□ 1
TNFRSF12A-202ENST00000341627 USP54Q70EL1 1684 aa21.26■□□□□ 0.99
TNFRSF12A-202ENST00000341627 SOX12O15370 315 aa21.26■□□□□ 0.99
TNFRSF12A-202ENST00000341627 ARHGEF25Q86VW2 580 aa21.26■□□□□ 0.99
TNFRSF12A-202ENST00000341627 CARD14Q9BXL6 1004 aa21.26■□□□□ 0.99
TNFRSF12A-202ENST00000341627 NSD3Q9BZ95 1437 aa21.26■□□□□ 0.99
TNFRSF12A-202ENST00000341627 A0A0G2JS52 829 aa21.25■□□□□ 0.99
TNFRSF12A-202ENST00000341627 OVOS2A0A0J9YW53 1432 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms