RNA–Protein interactions for RNA: ENST00000340829.9

CDK13-202, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK13, Length 5,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-202ENST00000340829 CHMP4CQ96CF2 233 aa23.48■■□□□ 1.35
CDK13-202ENST00000340829 CLASRPQ8N2M8 674 aaKnown RBP23.48■■□□□ 1.35
CDK13-202ENST00000340829 THUMPD2Q9BTF0 503 aaKnown RBP23.48■■□□□ 1.35
CDK13-202ENST00000340829 PLEKHO1Q53GL0 409 aaPredicted RBP23.48■■□□□ 1.35
CDK13-202ENST00000340829 DISP3Q9P2K9 1392 aa23.47■■□□□ 1.35
CDK13-202ENST00000340829 UGGT2Q9NYU1 1516 aa23.47■■□□□ 1.35
CDK13-202ENST00000340829 GOLGA6L19H0YKK7 550 aa23.47■■□□□ 1.35
CDK13-202ENST00000340829 BECN2A8MW95 431 aa23.47■■□□□ 1.35
CDK13-202ENST00000340829 AMER1Q5JTC6 1135 aaPredicted RBP23.47■■□□□ 1.35
CDK13-202ENST00000340829 NUDT16Q96DE0 195 aaKnown RBP23.46■■□□□ 1.35
CDK13-202ENST00000340829 NEK4P51957 841 aa23.45■■□□□ 1.34
CDK13-202ENST00000340829 CPLX1O14810 134 aa23.45■■□□□ 1.34
CDK13-202ENST00000340829 NFE2L2Q16236 605 aa23.45■■□□□ 1.34
CDK13-202ENST00000340829 G3V3G9 751 aa23.45■■□□□ 1.34
CDK13-202ENST00000340829 DCAF8Q5TAQ9 597 aa23.45■■□□□ 1.34
CDK13-202ENST00000340829 CNTROBQ8N137 903 aa23.45■■□□□ 1.34
CDK13-202ENST00000340829 CPLX2Q6PUV4 134 aaKnown RBP23.44■■□□□ 1.34
CDK13-202ENST00000340829 TMEM57Q8N5G2 664 aa23.44■■□□□ 1.34
CDK13-202ENST00000340829 CCDC61Q9Y6R9 512 aa23.44■■□□□ 1.34
CDK13-202ENST00000340829 SYNE3Q6ZMZ3 975 aa23.44■■□□□ 1.34
CDK13-202ENST00000340829 BICD2Q8TD16 824 aa23.44■■□□□ 1.34
CDK13-202ENST00000340829 CHD1LQ86WJ1 897 aa23.44■■□□□ 1.34
CDK13-202ENST00000340829 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.43■■□□□ 1.34
CDK13-202ENST00000340829 PROSER2Q86WR7 435 aaPredicted RBP23.43■■□□□ 1.34
CDK13-202ENST00000340829 TRAK2O60296 914 aa23.43■■□□□ 1.34
CDK13-202ENST00000340829 FOSBP53539 338 aa23.43■■□□□ 1.34
CDK13-202ENST00000340829 AKAP17AQ02040 695 aaKnown RBP23.43■■□□□ 1.34
CDK13-202ENST00000340829 FSD1Q9BTV5 496 aa23.42■■□□□ 1.34
CDK13-202ENST00000340829 RARSP54136 660 aaKnown RBP23.42■■□□□ 1.34
CDK13-202ENST00000340829 CCT4P50991 539 aaKnown RBP23.41■■□□□ 1.34
CDK13-202ENST00000340829 ZNF428Q96B54 188 aa23.41■■□□□ 1.34
CDK13-202ENST00000340829 IDI1Q13907 227 aa23.4■■□□□ 1.34
CDK13-202ENST00000340829 FAM135AQ9P2D6 1515 aa23.4■■□□□ 1.34
CDK13-202ENST00000340829 TRDNQ13061 729 aa23.4■■□□□ 1.34
CDK13-202ENST00000340829 RABEP1Q15276 862 aa23.4■■□□□ 1.34
CDK13-202ENST00000340829 SCAF11Q99590 1463 aaKnown RBP23.4■■□□□ 1.34
CDK13-202ENST00000340829 ZNF530Q6P9A1 599 aaPredicted RBP23.4■■□□□ 1.34
CDK13-202ENST00000340829 FBXO31Q5XUX0 539 aaPredicted RBP23.39■■□□□ 1.34
CDK13-202ENST00000340829 SSH1Q8WYL5 1049 aa23.39■■□□□ 1.33
CDK13-202ENST00000340829 NOS1P29475 1434 aa23.38■■□□□ 1.33
CDK13-202ENST00000340829 NUP153P49790 1475 aaKnown RBP23.38■■□□□ 1.33
CDK13-202ENST00000340829 DUSP27Q5VZP5 1158 aa23.38■■□□□ 1.33
CDK13-202ENST00000340829 RSPH6AQ9H0K4 717 aa23.38■■□□□ 1.33
CDK13-202ENST00000340829 DCTN1Q14203 1278 aa23.38■■□□□ 1.33
CDK13-202ENST00000340829 WASHC4Q2M389 1173 aa23.38■■□□□ 1.33
CDK13-202ENST00000340829 RAPGEF6Q8TEU7 1601 aa23.38■■□□□ 1.33
CDK13-202ENST00000340829 NKTRP30414 1462 aaKnown RBP23.38■■□□□ 1.33
CDK13-202ENST00000340829 TRIM29Q14134 588 aa23.37■■□□□ 1.33
CDK13-202ENST00000340829 NME9Q86XW9 330 aa23.37■■□□□ 1.33
CDK13-202ENST00000340829 LRRCC1Q9C099 1032 aa23.37■■□□□ 1.33
CDK13-202ENST00000340829 SRCIN1Q9C0H9 1055 aa23.36■■□□□ 1.33
CDK13-202ENST00000340829 MIS18AQ9NYP9 233 aa23.36■■□□□ 1.33
CDK13-202ENST00000340829 ATP10BO94823 1461 aa23.36■■□□□ 1.33
CDK13-202ENST00000340829 MCM10Q7L590 875 aa23.35■■□□□ 1.33
CDK13-202ENST00000340829 FANCAO15360 1455 aa23.35■■□□□ 1.33
CDK13-202ENST00000340829 MRE11P49959 708 aa23.35■■□□□ 1.33
CDK13-202ENST00000340829 NFXL1Q6ZNB6 911 aa23.34■■□□□ 1.33
CDK13-202ENST00000340829 VPS37DQ86XT2 251 aa23.34■■□□□ 1.33
CDK13-202ENST00000340829 DNAJC2Q99543 621 aaKnown RBP23.34■■□□□ 1.33
CDK13-202ENST00000340829 EMILIN1Q9Y6C2 1016 aa23.34■■□□□ 1.33
CDK13-202ENST00000340829 CAVIN1Q6NZI2 390 aaKnown RBP23.34■■□□□ 1.33
CDK13-202ENST00000340829 PES1O00541 588 aaKnown RBP23.33■■□□□ 1.33
CDK13-202ENST00000340829 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.33■■□□□ 1.33
CDK13-202ENST00000340829 MSH5O43196 834 aa23.33■■□□□ 1.33
CDK13-202ENST00000340829 MARCH6O60337 910 aa23.33■■□□□ 1.33
CDK13-202ENST00000340829 CCDC27Q2M243 656 aa23.33■■□□□ 1.33
CDK13-202ENST00000340829 RNF214Q8ND24 703 aa23.33■■□□□ 1.33
CDK13-202ENST00000340829 TATP17735 454 aaPredicted RBP23.33■■□□□ 1.32
CDK13-202ENST00000340829 TPD52L1Q16890 204 aaPredicted RBP23.32■■□□□ 1.32
CDK13-202ENST00000340829 MAP4K4O95819 1239 aaPredicted RBP23.32■■□□□ 1.32
CDK13-202ENST00000340829 RALYLQ86SE5 291 aaKnown RBP23.32■■□□□ 1.32
CDK13-202ENST00000340829 PSMA5P28066 241 aa23.32■■□□□ 1.32
CDK13-202ENST00000340829 PRPF40AO75400 957 aaKnown RBP23.31■■□□□ 1.32
CDK13-202ENST00000340829 NASPP49321 788 aaPredicted RBP23.31■■□□□ 1.32
CDK13-202ENST00000340829 XPCQ01831 940 aaPredicted RBP23.31■■□□□ 1.32
CDK13-202ENST00000340829 FBXW7Q969H0 707 aa23.31■■□□□ 1.32
CDK13-202ENST00000340829 BRPF3Q9ULD4 1205 aa23.31■■□□□ 1.32
CDK13-202ENST00000340829 C14orf93Q9H972 538 aaKnown RBP23.31■■□□□ 1.32
CDK13-202ENST00000340829 SIL1Q9H173 461 aa23.3■■□□□ 1.32
CDK13-202ENST00000340829 DHX29Q7Z478 1369 aaKnown RBP23.3■■□□□ 1.32
CDK13-202ENST00000340829 K7ELQ4 463 aaPredicted RBP23.29■■□□□ 1.32
CDK13-202ENST00000340829 MCM2P49736 904 aa23.29■■□□□ 1.32
CDK13-202ENST00000340829 HSP90AA2PQ14568 343 aaPredicted RBP23.29■■□□□ 1.32
CDK13-202ENST00000340829 ERC1Q8IUD2 1116 aa23.29■■□□□ 1.32
CDK13-202ENST00000340829 LRPPRCP42704 1394 aaKnown RBP23.29■■□□□ 1.32
CDK13-202ENST00000340829 RALGAPBQ86X10 1494 aa23.29■■□□□ 1.32
CDK13-202ENST00000340829 ANKLE2Q86XL3 938 aa23.29■■□□□ 1.32
CDK13-202ENST00000340829 IL1RAPL2Q9NP60 686 aa23.28■■□□□ 1.32
CDK13-202ENST00000340829 STRN4Q9NRL3 753 aa23.28■■□□□ 1.32
CDK13-202ENST00000340829 SASS6Q6UVJ0 657 aa23.28■■□□□ 1.32
CDK13-202ENST00000340829 RPAP2Q8IXW5 612 aaPredicted RBP23.28■■□□□ 1.32
CDK13-202ENST00000340829 SRGAP3O43295 1099 aa23.28■■□□□ 1.32
CDK13-202ENST00000340829 MYL6BP14649 208 aa23.28■■□□□ 1.32
CDK13-202ENST00000340829 VPS53Q5VIR6 699 aa23.27■■□□□ 1.32
CDK13-202ENST00000340829 CTTNBP2Q8WZ74 1663 aa23.27■■□□□ 1.32
CDK13-202ENST00000340829 CCDC73Q6ZRK6 1079 aa23.27■■□□□ 1.32
CDK13-202ENST00000340829 IFT57Q9NWB7 429 aa23.27■■□□□ 1.32
CDK13-202ENST00000340829 FAM177BA6PVY3 158 aa23.26■■□□□ 1.31
CDK13-202ENST00000340829 ABCC11Q96J66 1382 aa23.26■■□□□ 1.31
CDK13-202ENST00000340829 ZNF592Q92610 1267 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms