RNA–Protein interactions for RNA: ENST00000340699.7

PBX1-201, Transcript of PBX homeobox 1, humanhuman

TSL 4

Gene PBX1, Length 734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-201ENST00000340699 QTRT2Q9H974 415 aaKnown RBP31.78■■■□□ 2.68
PBX1-201ENST00000340699 ALS2Q96Q42 1657 aa31.78■■■□□ 2.68
PBX1-201ENST00000340699 FNBP4Q8N3X1 1017 aaPredicted RBP31.77■■■□□ 2.68
PBX1-201ENST00000340699 ATAD2Q6PL18 1390 aa31.74■■■□□ 2.67
PBX1-201ENST00000340699 ST20-MTHFSA0A0A6YYL1 179 aa31.72■■■□□ 2.67
PBX1-201ENST00000340699 SLC24A1O60721 1099 aa31.71■■■□□ 2.67
PBX1-201ENST00000340699 TRPC5Q9UL62 973 aaPredicted RBP31.71■■■□□ 2.67
PBX1-201ENST00000340699 ABCA3Q99758 1704 aa31.7■■■□□ 2.67
PBX1-201ENST00000340699 BRD4O60885 1362 aaPredicted RBP31.69■■■□□ 2.66
PBX1-201ENST00000340699 RBM6P78332 1123 aaKnown RBP31.69■■■□□ 2.66
PBX1-201ENST00000340699 ABTB2Q8N961 1025 aa31.69■■■□□ 2.66
PBX1-201ENST00000340699 ZNF692Q9BU19 519 aaPredicted RBP31.68■■■□□ 2.66
PBX1-201ENST00000340699 NUTM2GQ5VZR2 741 aa31.67■■■□□ 2.66
PBX1-201ENST00000340699 USP47Q96K76 1375 aa31.66■■■□□ 2.66
PBX1-201ENST00000340699 USP6P35125 1406 aa31.65■■■□□ 2.66
PBX1-201ENST00000340699 BCL9LQ86UU0 1499 aa31.65■■■□□ 2.66
PBX1-201ENST00000340699 UNC5CLQ8IV45 518 aa31.64■■■□□ 2.66
PBX1-201ENST00000340699 PUS7Q96PZ0 661 aaKnown RBP31.63■■■□□ 2.65
PBX1-201ENST00000340699 TESK2Q96S53 571 aa31.63■■■□□ 2.65
PBX1-201ENST00000340699 SLIT2O94813 1529 aa31.63■■■□□ 2.65
PBX1-201ENST00000340699 FAM83GA6ND36 823 aa31.62■■■□□ 2.65
PBX1-201ENST00000340699 NLRP13Q86W25 1043 aa31.62■■■□□ 2.65
PBX1-201ENST00000340699 TMC1Q8TDI8 760 aa31.62■■■□□ 2.65
PBX1-201ENST00000340699 CDK12Q9NYV4 1490 aaPredicted RBP31.61■■■□□ 2.65
PBX1-201ENST00000340699 ATRNO75882 1429 aa31.61■■■□□ 2.65
PBX1-201ENST00000340699 CRYBG1Q9Y4K1 1723 aa31.59■■■□□ 2.65
PBX1-201ENST00000340699 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.58■■■□□ 2.65
PBX1-201ENST00000340699 KTN1Q86UP2 1357 aaKnown RBP31.56■■■□□ 2.64
PBX1-201ENST00000340699 AKAP12Q02952 1782 aa31.56■■■□□ 2.64
PBX1-201ENST00000340699 TMF1P82094 1093 aa31.56■■■□□ 2.64
PBX1-201ENST00000340699 PRDM11Q9NQV5 511 aa31.56■■■□□ 2.64
PBX1-201ENST00000340699 PLCH1Q4KWH8 1693 aa31.56■■■□□ 2.64
PBX1-201ENST00000340699 NWD2Q9ULI1 1742 aa31.55■■■□□ 2.64
PBX1-201ENST00000340699 NLRP6P59044 892 aa31.55■■■□□ 2.64
PBX1-201ENST00000340699 HDGFL2Q7Z4V5 671 aaPredicted RBP31.55■■■□□ 2.64
PBX1-201ENST00000340699 GJD4Q96KN9 370 aaPredicted RBP31.55■■■□□ 2.64
PBX1-201ENST00000340699 PHRF1Q9P1Y6 1649 aaKnown RBP31.55■■■□□ 2.64
PBX1-201ENST00000340699 CPSF1Q10570 1443 aaKnown RBP31.55■■■□□ 2.64
PBX1-201ENST00000340699 COL14A1Q05707 1796 aaKnown RBP31.54■■■□□ 2.64
PBX1-201ENST00000340699 SLC12A5Q9H2X9 1139 aa31.54■■■□□ 2.64
PBX1-201ENST00000340699 SSH2Q76I76 1423 aa31.54■■■□□ 2.64
PBX1-201ENST00000340699 TTC21BQ7Z4L5 1316 aa31.53■■■□□ 2.64
PBX1-201ENST00000340699 ZC3H6P61129 1189 aaKnown RBP31.53■■■□□ 2.64
PBX1-201ENST00000340699 BTG4Q9NY30 223 aa31.53■■■□□ 2.64
PBX1-201ENST00000340699 USP19O94966 1318 aa31.52■■■□□ 2.64
PBX1-201ENST00000340699 TERF2IPQ9NYB0 399 aa31.52■■■□□ 2.64
PBX1-201ENST00000340699 TTC21AQ8NDW8 1320 aa31.51■■■□□ 2.64
PBX1-201ENST00000340699 CCDC9Q9Y3X0 531 aaKnown RBP31.51■■■□□ 2.63
PBX1-201ENST00000340699 KIAA0232Q92628 1395 aa31.51■■■□□ 2.63
PBX1-201ENST00000340699 RGS12O14924 1447 aa31.5■■■□□ 2.63
PBX1-201ENST00000340699 VPS72Q15906 364 aa31.5■■■□□ 2.63
PBX1-201ENST00000340699 GCP02774 474 aa31.49■■■□□ 2.63
PBX1-201ENST00000340699 CDCA8Q53HL2 280 aa31.49■■■□□ 2.63
PBX1-201ENST00000340699 NINLQ9Y2I6 1382 aa31.48■■■□□ 2.63
PBX1-201ENST00000340699 CHRNA2Q15822 529 aa31.47■■■□□ 2.63
PBX1-201ENST00000340699 MON2Q7Z3U7 1717 aa31.46■■■□□ 2.63
PBX1-201ENST00000340699 NRKQ7Z2Y5 1582 aa31.46■■■□□ 2.63
PBX1-201ENST00000340699 CD163L1Q9NR16 1453 aa31.46■■■□□ 2.63
PBX1-201ENST00000340699 PIK3C2AO00443 1686 aa31.45■■■□□ 2.63
PBX1-201ENST00000340699 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.45■■■□□ 2.63
PBX1-201ENST00000340699 CPDO75976 1380 aa31.43■■■□□ 2.62
PBX1-201ENST00000340699 NRAPQ86VF7 1730 aa31.42■■■□□ 2.62
PBX1-201ENST00000340699 EIF4G2P78344 907 aaKnown RBP eCLIP31.41■■■□□ 2.62
PBX1-201ENST00000340699 A0A1W2PP64 1363 aa31.41■■■□□ 2.62
PBX1-201ENST00000340699 GLI3P10071 1580 aa31.4■■■□□ 2.62
PBX1-201ENST00000340699 KCNH5Q8NCM2 988 aa31.4■■■□□ 2.62
PBX1-201ENST00000340699 EDC4Q6P2E9 1401 aaKnown RBP31.4■■■□□ 2.62
PBX1-201ENST00000340699 SLIT3O75094 1523 aa31.39■■■□□ 2.62
PBX1-201ENST00000340699 ZBTB7CA1YPR0 619 aa31.39■■■□□ 2.62
PBX1-201ENST00000340699 EVA1CP58658 441 aa31.39■■■□□ 2.62
PBX1-201ENST00000340699 STRN4Q9NRL3 753 aa31.38■■■□□ 2.61
PBX1-201ENST00000340699 NME9Q86XW9 330 aa31.35■■■□□ 2.61
PBX1-201ENST00000340699 SOX12O15370 315 aa31.34■■■□□ 2.61
PBX1-201ENST00000340699 USP31Q70CQ4 1352 aa31.33■■■□□ 2.61
PBX1-201ENST00000340699 ANKRD36BQ8N2N9 1353 aa31.33■■■□□ 2.61
PBX1-201ENST00000340699 HSPA5P11021 654 aaKnown RBP31.33■■■□□ 2.61
PBX1-201ENST00000340699 SPATA31A5Q5VU36 1347 aa31.32■■■□□ 2.6
PBX1-201ENST00000340699 SPATA31A7Q8IWB4 1347 aa31.32■■■□□ 2.6
PBX1-201ENST00000340699 SEPT12Q8IYM1 358 aa31.32■■■□□ 2.6
PBX1-201ENST00000340699 ZRANB1Q9UGI0 708 aa31.32■■■□□ 2.6
PBX1-201ENST00000340699 A0A0G2JS52 829 aa31.31■■■□□ 2.6
PBX1-201ENST00000340699 ONECUT3O60422 494 aaPredicted RBP31.31■■■□□ 2.6
PBX1-201ENST00000340699 MYT1Q01538 1121 aa31.31■■■□□ 2.6
PBX1-201ENST00000340699 UPF1Q92900 1129 aaKnown RBP eCLIP31.31■■■□□ 2.6
PBX1-201ENST00000340699 CAMTA1Q9Y6Y1 1673 aa31.3■■■□□ 2.6
PBX1-201ENST00000340699 AATKQ6ZMQ8 1374 aa31.3■■■□□ 2.6
PBX1-201ENST00000340699 FAM98CQ17RN3 349 aaKnown RBP31.29■■■□□ 2.6
PBX1-201ENST00000340699 LMO7Q8WWI1 1683 aa31.29■■■□□ 2.6
PBX1-201ENST00000340699 ARHGEF25Q86VW2 580 aa31.27■■■□□ 2.6
PBX1-201ENST00000340699 SPATA31A1Q5TZJ5 1347 aa31.26■■■□□ 2.6
PBX1-201ENST00000340699 POLR3GLQ9BT43 218 aa31.26■■■□□ 2.59
PBX1-201ENST00000340699 USP54Q70EL1 1684 aa31.25■■■□□ 2.59
PBX1-201ENST00000340699 LARP1Q6PKG0 1096 aaKnown RBP31.24■■■□□ 2.59
PBX1-201ENST00000340699 USP35Q9P2H5 1018 aa31.24■■■□□ 2.59
PBX1-201ENST00000340699 COL5A2P05997 1499 aaPredicted RBP31.22■■■□□ 2.59
PBX1-201ENST00000340699 COG3Q96JB2 828 aa31.22■■■□□ 2.59
PBX1-201ENST00000340699 NFAT5O94916 1531 aa31.22■■■□□ 2.59
PBX1-201ENST00000340699 BRWD3Q6RI45 1802 aa31.2■■■□□ 2.59
PBX1-201ENST00000340699 KRT27Q7Z3Y8 459 aa31.2■■■□□ 2.59
PBX1-201ENST00000340699 OVOS2A0A0J9YW53 1432 aa31.19■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms