RNA–Protein interactions for RNA: ENST00000340384.4

TUBB4B-201, Transcript of tubulin beta 4B class IVb, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB4B, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-201ENST00000340384 TOM1O60784 492 aa20.42■□□□□ 0.86
TUBB4B-201ENST00000340384 NGDNQ8NEJ9 315 aaKnown RBP20.42■□□□□ 0.86
TUBB4B-201ENST00000340384 SSH2Q76I76 1423 aa20.41■□□□□ 0.86
TUBB4B-201ENST00000340384 TERF2IPQ9NYB0 399 aa20.41■□□□□ 0.86
TUBB4B-201ENST00000340384 SUPT16HQ9Y5B9 1047 aaKnown RBP20.4■□□□□ 0.86
TUBB4B-201ENST00000340384 USP6P35125 1406 aa20.39■□□□□ 0.86
TUBB4B-201ENST00000340384 XPCQ01831 940 aaPredicted RBP20.39■□□□□ 0.86
TUBB4B-201ENST00000340384 ZNF692Q9BU19 519 aaPredicted RBP20.39■□□□□ 0.86
TUBB4B-201ENST00000340384 AKAP12Q02952 1782 aa20.39■□□□□ 0.85
TUBB4B-201ENST00000340384 INSRP06213 1382 aa20.39■□□□□ 0.85
TUBB4B-201ENST00000340384 HDGFL2Q7Z4V5 671 aaPredicted RBP20.38■□□□□ 0.85
TUBB4B-201ENST00000340384 KIF1AQ12756 1690 aa20.38■□□□□ 0.85
TUBB4B-201ENST00000340384 ROBO1Q9Y6N7 1651 aa20.38■□□□□ 0.85
TUBB4B-201ENST00000340384 PIP4K2BP78356 416 aa20.38■□□□□ 0.85
TUBB4B-201ENST00000340384 CC2D1BQ5T0F9 858 aaKnown RBP20.38■□□□□ 0.85
TUBB4B-201ENST00000340384 NSD3Q9BZ95 1437 aa20.37■□□□□ 0.85
TUBB4B-201ENST00000340384 MON2Q7Z3U7 1717 aa20.36■□□□□ 0.85
TUBB4B-201ENST00000340384 KRT28Q7Z3Y7 464 aa20.36■□□□□ 0.85
TUBB4B-201ENST00000340384 PELP1Q8IZL8 1130 aaKnown RBP20.36■□□□□ 0.85
TUBB4B-201ENST00000340384 PXDNQ92626 1479 aa20.35■□□□□ 0.85
TUBB4B-201ENST00000340384 PSME1Q06323 249 aa20.35■□□□□ 0.85
TUBB4B-201ENST00000340384 AMER1Q5JTC6 1135 aaPredicted RBP20.35■□□□□ 0.85
TUBB4B-201ENST00000340384 TTC21BQ7Z4L5 1316 aa20.35■□□□□ 0.85
TUBB4B-201ENST00000340384 NRKQ7Z2Y5 1582 aa20.34■□□□□ 0.85
TUBB4B-201ENST00000340384 SOS2Q07890 1332 aaPredicted RBP20.34■□□□□ 0.85
TUBB4B-201ENST00000340384 EDC4Q6P2E9 1401 aaKnown RBP20.34■□□□□ 0.85
TUBB4B-201ENST00000340384 NPHP3Q7Z494 1330 aa20.33■□□□□ 0.85
TUBB4B-201ENST00000340384 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.33■□□□□ 0.84
TUBB4B-201ENST00000340384 ZRANB1Q9UGI0 708 aa20.33■□□□□ 0.84
TUBB4B-201ENST00000340384 NHSL1Q5SYE7 1610 aa20.32■□□□□ 0.84
TUBB4B-201ENST00000340384 FYB1O15117 783 aa20.32■□□□□ 0.84
TUBB4B-201ENST00000340384 TRPM3Q9HCF6 1732 aaPredicted RBP20.32■□□□□ 0.84
TUBB4B-201ENST00000340384 FKBP8Q14318 412 aa20.31■□□□□ 0.84
TUBB4B-201ENST00000340384 NME9Q86XW9 330 aa20.31■□□□□ 0.84
TUBB4B-201ENST00000340384 AHDC1Q5TGY3 1603 aaPredicted RBP20.3■□□□□ 0.84
TUBB4B-201ENST00000340384 SMG6Q86US8 1419 aaKnown RBP20.28■□□□□ 0.84
TUBB4B-201ENST00000340384 SBNO1A3KN83 1393 aa20.28■□□□□ 0.84
TUBB4B-201ENST00000340384 PAK3O75914 559 aaPredicted RBP20.27■□□□□ 0.84
TUBB4B-201ENST00000340384 GGNBP2Q9H3C7 697 aa20.27■□□□□ 0.84
TUBB4B-201ENST00000340384 SPATA31A3Q5VYP0 1347 aa20.27■□□□□ 0.84
TUBB4B-201ENST00000340384 TTC21AQ8NDW8 1320 aa20.26■□□□□ 0.83
TUBB4B-201ENST00000340384 PPP2R1AP30153 589 aa20.26■□□□□ 0.83
TUBB4B-201ENST00000340384 PIK3C2AO00443 1686 aa20.26■□□□□ 0.83
TUBB4B-201ENST00000340384 CGNL1Q0VF96 1302 aa20.26■□□□□ 0.83
TUBB4B-201ENST00000340384 NUTM2GQ5VZR2 741 aa20.25■□□□□ 0.83
TUBB4B-201ENST00000340384 BLMP54132 1417 aaPredicted RBP20.25■□□□□ 0.83
TUBB4B-201ENST00000340384 ABTB2Q8N961 1025 aa20.24■□□□□ 0.83
TUBB4B-201ENST00000340384 ALS2Q96Q42 1657 aa20.24■□□□□ 0.83
TUBB4B-201ENST00000340384 USP31Q70CQ4 1352 aa20.24■□□□□ 0.83
TUBB4B-201ENST00000340384 COL16A1Q07092 1604 aaPredicted RBP20.24■□□□□ 0.83
TUBB4B-201ENST00000340384 ERICH6BQ5W0A0 696 aa20.24■□□□□ 0.83
TUBB4B-201ENST00000340384 TNS3Q68CZ2 1445 aa20.23■□□□□ 0.83
TUBB4B-201ENST00000340384 OVOS2A0A0J9YW53 1432 aa20.23■□□□□ 0.83
TUBB4B-201ENST00000340384 OVOS2Q6IE36 1432 aa20.23■□□□□ 0.83
TUBB4B-201ENST00000340384 NUDCQ9Y266 331 aa20.22■□□□□ 0.83
TUBB4B-201ENST00000340384 MARF1Q9Y4F3 1742 aaKnown RBP20.22■□□□□ 0.83
TUBB4B-201ENST00000340384 FBLN1P23142 703 aa20.21■□□□□ 0.83
TUBB4B-201ENST00000340384 NLRP6P59044 892 aa20.2■□□□□ 0.82
TUBB4B-201ENST00000340384 WDR43Q15061 677 aaKnown RBP eCLIP20.2■□□□□ 0.828e-7■■■■■ 31.1
TUBB4B-201ENST00000340384 PHLPP1O60346 1717 aa20.2■□□□□ 0.82
TUBB4B-201ENST00000340384 NSD2O96028 1365 aa20.2■□□□□ 0.82
TUBB4B-201ENST00000340384 HSPA1LP34931 641 aa20.2■□□□□ 0.82
TUBB4B-201ENST00000340384 PDE3BQ13370 1112 aa20.2■□□□□ 0.82
TUBB4B-201ENST00000340384 LMOD2Q6P5Q4 547 aa20.2■□□□□ 0.82
TUBB4B-201ENST00000340384 LRRC59Q96AG4 307 aaKnown RBP20.2■□□□□ 0.82
TUBB4B-201ENST00000340384 KIF20BQ96Q89 1820 aa20.19■□□□□ 0.82
TUBB4B-201ENST00000340384 MED1Q15648 1581 aaPredicted RBP20.18■□□□□ 0.82
TUBB4B-201ENST00000340384 USP19O94966 1318 aa20.17■□□□□ 0.82
TUBB4B-201ENST00000340384 CABLES1Q8TDN4 633 aa20.17■□□□□ 0.82
TUBB4B-201ENST00000340384 USP54Q70EL1 1684 aa20.17■□□□□ 0.82
TUBB4B-201ENST00000340384 COG3Q96JB2 828 aa20.16■□□□□ 0.82
TUBB4B-201ENST00000340384 MORC1Q86VD1 984 aa20.16■□□□□ 0.82
TUBB4B-201ENST00000340384 ARHGEF10O15013 1369 aa20.15■□□□□ 0.82
TUBB4B-201ENST00000340384 PNPLA6Q8IY17 1366 aa20.15■□□□□ 0.82
TUBB4B-201ENST00000340384 PLEKHG5O94827 1062 aa20.15■□□□□ 0.82
TUBB4B-201ENST00000340384 TNNT2P45379 298 aaPredicted RBP20.15■□□□□ 0.82
TUBB4B-201ENST00000340384 ANKRD26Q9UPS8 1709 aa20.14■□□□□ 0.81
TUBB4B-201ENST00000340384 FBXO41Q8TF61 875 aa20.13■□□□□ 0.81
TUBB4B-201ENST00000340384 SLIT3O75094 1523 aa20.13■□□□□ 0.81
TUBB4B-201ENST00000340384 CRYBG1Q9Y4K1 1723 aa20.13■□□□□ 0.81
TUBB4B-201ENST00000340384 GCP02774 474 aa20.13■□□□□ 0.81
TUBB4B-201ENST00000340384 SOX12O15370 315 aa20.11■□□□□ 0.81
TUBB4B-201ENST00000340384 NFAT5O94916 1531 aa20.11■□□□□ 0.81
TUBB4B-201ENST00000340384 COL22A1Q8NFW1 1626 aaPredicted RBP20.1■□□□□ 0.81
TUBB4B-201ENST00000340384 AATKQ6ZMQ8 1374 aa20.1■□□□□ 0.81
TUBB4B-201ENST00000340384 RRS1Q15050 365 aaKnown RBP20.09■□□□□ 0.81
TUBB4B-201ENST00000340384 POLKQ9UBT6 870 aa20.09■□□□□ 0.81
TUBB4B-201ENST00000340384 ADAMTS8Q9UP79 889 aa20.09■□□□□ 0.81
TUBB4B-201ENST00000340384 EMILIN1Q9Y6C2 1016 aa20.08■□□□□ 0.8
TUBB4B-201ENST00000340384 PHRF1Q9P1Y6 1649 aaKnown RBP20.08■□□□□ 0.8
TUBB4B-201ENST00000340384 JCADQ9P266 1359 aa20.07■□□□□ 0.8
TUBB4B-201ENST00000340384 NGEFQ8N5V2 710 aa20.07■□□□□ 0.8
TUBB4B-201ENST00000340384 KCNH5Q8NCM2 988 aa20.06■□□□□ 0.8
TUBB4B-201ENST00000340384 MAP3K19Q56UN5 1328 aa20.06■□□□□ 0.8
TUBB4B-201ENST00000340384 ABCA3Q99758 1704 aa20.06■□□□□ 0.8
TUBB4B-201ENST00000340384 ZC3H6P61129 1189 aaKnown RBP20.05■□□□□ 0.8
TUBB4B-201ENST00000340384 ARHGEF25Q86VW2 580 aa20.05■□□□□ 0.8
TUBB4B-201ENST00000340384 SHPRHQ149N8 1683 aa20.05■□□□□ 0.8
TUBB4B-201ENST00000340384 MTHFSP49914 203 aa20.05■□□□□ 0.8
TUBB4B-201ENST00000340384 CFAP53Q96M91 514 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms