RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 GOLGA6L22H0YM25 854 aa11.7□□□□□ -0.54
NECAP1-201ENST00000339754 GAS2L2Q8NHY3 880 aa11.7□□□□□ -0.54
NECAP1-201ENST00000339754 MADDQ8WXG6 1647 aa11.7□□□□□ -0.54
NECAP1-201ENST00000339754 ZKSCAN5Q9Y2L8 839 aa11.7□□□□□ -0.54
NECAP1-201ENST00000339754 SHPRHQ149N8 1683 aa11.7□□□□□ -0.54
NECAP1-201ENST00000339754 ABCA9Q8IUA7 1624 aa11.69□□□□□ -0.54
NECAP1-201ENST00000339754 ARAP3Q8WWN8 1544 aa11.69□□□□□ -0.54
NECAP1-201ENST00000339754 CCDC27Q2M243 656 aa11.69□□□□□ -0.54
NECAP1-201ENST00000339754 IQGAP3Q86VI3 1631 aa11.69□□□□□ -0.54
NECAP1-201ENST00000339754 CSPP1Q1MSJ5 1256 aa11.69□□□□□ -0.54
NECAP1-201ENST00000339754 ZSCAN23Q3MJ62 389 aa11.69□□□□□ -0.54
NECAP1-201ENST00000339754 UTP14CQ5TAP6 766 aaKnown RBP11.69□□□□□ -0.54
NECAP1-201ENST00000339754 FTSJ3Q8IY81 847 aaKnown RBP11.69□□□□□ -0.54
NECAP1-201ENST00000339754 RBM42Q9BTD8 480 aaKnown RBP11.69□□□□□ -0.54
NECAP1-201ENST00000339754 NUCB1Q02818 461 aa11.68□□□□□ -0.54
NECAP1-201ENST00000339754 MCM5P33992 734 aa11.68□□□□□ -0.54
NECAP1-201ENST00000339754 DMTNQ08495 405 aa11.68□□□□□ -0.54
NECAP1-201ENST00000339754 SASS6Q6UVJ0 657 aa11.68□□□□□ -0.54
NECAP1-201ENST00000339754 PRDM10Q9NQV6 1147 aa11.68□□□□□ -0.54
NECAP1-201ENST00000339754 ZHX1Q9UKY1 873 aaPredicted RBP11.68□□□□□ -0.54
NECAP1-201ENST00000339754 CEP152O94986 1710 aa11.67□□□□□ -0.54
NECAP1-201ENST00000339754 KDM5AP29375 1690 aaKnown RBP11.67□□□□□ -0.54
NECAP1-201ENST00000339754 TRIM27P14373 513 aa11.67□□□□□ -0.54
NECAP1-201ENST00000339754 CCDC94Q9BW85 323 aaPredicted RBP11.67□□□□□ -0.54
NECAP1-201ENST00000339754 LMBRD1Q9NUN5 540 aa11.67□□□□□ -0.54
NECAP1-201ENST00000339754 ZSCAN20P17040 1043 aaPredicted RBP11.67□□□□□ -0.54
NECAP1-201ENST00000339754 PRIM1P49642 420 aaKnown RBP11.67□□□□□ -0.54
NECAP1-201ENST00000339754 FGD1P98174 961 aa11.67□□□□□ -0.54
NECAP1-201ENST00000339754 CAVIN1Q6NZI2 390 aaKnown RBP11.67□□□□□ -0.54
NECAP1-201ENST00000339754 ARID3AQ99856 593 aa11.67□□□□□ -0.54
NECAP1-201ENST00000339754 DDX19BQ9UMR2 479 aa11.67□□□□□ -0.54
NECAP1-201ENST00000339754 ADGRL1O94910 1474 aa11.66□□□□□ -0.54
NECAP1-201ENST00000339754 ZFYVE16Q7Z3T8 1539 aa11.66□□□□□ -0.54
NECAP1-201ENST00000339754 BMP2KLQ5H9B9 411 aa11.66□□□□□ -0.54
NECAP1-201ENST00000339754 ZBTB40Q9NUA8 1239 aa11.66□□□□□ -0.54
NECAP1-201ENST00000339754 AK9Q5TCS8 1911 aa11.66□□□□□ -0.54
NECAP1-201ENST00000339754 MCTP1Q6DN14 999 aa11.65□□□□□ -0.54
NECAP1-201ENST00000339754 LNPKQ9C0E8 428 aa11.65□□□□□ -0.54
NECAP1-201ENST00000339754 CYP2E1P05181 493 aaPredicted RBP11.65□□□□□ -0.55
NECAP1-201ENST00000339754 NCBP3Q53F19 620 aaKnown RBP11.65□□□□□ -0.55
NECAP1-201ENST00000339754 ITPRIPQ8IWB1 547 aa11.65□□□□□ -0.55
NECAP1-201ENST00000339754 CHD1LQ86WJ1 897 aa11.64□□□□□ -0.55
NECAP1-201ENST00000339754 ERVK-7P63135 1459 aa11.64□□□□□ -0.55
NECAP1-201ENST00000339754 CT47B1P0C2W7 299 aaPredicted RBP11.64□□□□□ -0.55
NECAP1-201ENST00000339754 NCLP19338 710 aaKnown RBP11.64□□□□□ -0.55
NECAP1-201ENST00000339754 ATF7IPQ6VMQ6 1270 aa11.63□□□□□ -0.55
NECAP1-201ENST00000339754 ATP7AQ04656 1500 aa11.63□□□□□ -0.55
NECAP1-201ENST00000339754 TBC1D9Q6ZT07 1266 aa11.63□□□□□ -0.55
NECAP1-201ENST00000339754 TMEM57Q8N5G2 664 aa11.63□□□□□ -0.55
NECAP1-201ENST00000339754 SSH1Q8WYL5 1049 aa11.63□□□□□ -0.55
NECAP1-201ENST00000339754 SMC4Q9NTJ3 1288 aa11.63□□□□□ -0.55
NECAP1-201ENST00000339754 CCDC39Q9UFE4 941 aa11.63□□□□□ -0.55
NECAP1-201ENST00000339754 GPT2Q8TD30 523 aa11.62□□□□□ -0.55
NECAP1-201ENST00000339754 STAC3Q96MF2 364 aa11.62□□□□□ -0.55
NECAP1-201ENST00000339754 CD109Q6YHK3 1445 aa11.62□□□□□ -0.55
NECAP1-201ENST00000339754 NUCB2P80303 420 aa11.62□□□□□ -0.55
NECAP1-201ENST00000339754 SPHKAPQ2M3C7 1700 aa11.62□□□□□ -0.55
NECAP1-201ENST00000339754 PPP4R3CPQ6ZMV5 832 aa11.62□□□□□ -0.55
NECAP1-201ENST00000339754 TSR2Q969E8 191 aaKnown RBP11.62□□□□□ -0.55
NECAP1-201ENST00000339754 KIF16BQ96L93 1317 aa11.62□□□□□ -0.55
NECAP1-201ENST00000339754 NOB1Q9ULX3 412 aaKnown RBP11.62□□□□□ -0.55
NECAP1-201ENST00000339754 KIF3BO15066 747 aa11.61□□□□□ -0.55
NECAP1-201ENST00000339754 EXOSC9Q06265 439 aaKnown RBP11.61□□□□□ -0.55
NECAP1-201ENST00000339754 CYB5RLQ6IPT4 315 aa11.61□□□□□ -0.55
NECAP1-201ENST00000339754 MORC1Q86VD1 984 aa11.61□□□□□ -0.55
NECAP1-201ENST00000339754 RBM27Q9P2N5 1060 aaKnown RBP11.61□□□□□ -0.55
NECAP1-201ENST00000339754 INO80Q9ULG1 1556 aaPredicted RBP11.61□□□□□ -0.55
NECAP1-201ENST00000339754 PKP1Q13835 747 aa11.61□□□□□ -0.55
NECAP1-201ENST00000339754 MYRIPQ8NFW9 859 aa11.61□□□□□ -0.55
NECAP1-201ENST00000339754 SLC24A1O60721 1099 aa11.6□□□□□ -0.55
NECAP1-201ENST00000339754 TNNT2P45379 298 aaPredicted RBP11.6□□□□□ -0.55
NECAP1-201ENST00000339754 LRSAM1Q6UWE0 723 aa11.6□□□□□ -0.55
NECAP1-201ENST00000339754 ZNF710Q8N1W2 664 aa11.6□□□□□ -0.55
NECAP1-201ENST00000339754 JARID2Q92833 1246 aaPredicted RBP11.6□□□□□ -0.55
NECAP1-201ENST00000339754 CFAP74Q9C0B2 1584 aa11.6□□□□□ -0.55
NECAP1-201ENST00000339754 PRPF40AO75400 957 aaKnown RBP11.6□□□□□ -0.55
NECAP1-201ENST00000339754 TMEM63CQ9P1W3 806 aa11.59□□□□□ -0.55
NECAP1-201ENST00000339754 MTHFSP49914 203 aa11.59□□□□□ -0.55
NECAP1-201ENST00000339754 ZNF518AQ6AHZ1 1483 aa11.59□□□□□ -0.55
NECAP1-201ENST00000339754 NOS1P29475 1434 aa11.59□□□□□ -0.55
NECAP1-201ENST00000339754 GTPBP4Q9BZE4 634 aaKnown RBP11.58□□□□□ -0.56
NECAP1-201ENST00000339754 ANKRD45Q5TZF3 282 aa11.58□□□□□ -0.56
NECAP1-201ENST00000339754 ZDHHC9Q9Y397 364 aa11.58□□□□□ -0.56
NECAP1-201ENST00000339754 GTF2F1P35269 517 aaKnown RBP eCLIP11.57□□□□□ -0.56
NECAP1-201ENST00000339754 TSC1Q92574 1164 aa11.57□□□□□ -0.56
NECAP1-201ENST00000339754 NSFL1CQ9UNZ2 370 aaKnown RBP11.57□□□□□ -0.56
NECAP1-201ENST00000339754 SYCE3A1L190 88 aa11.57□□□□□ -0.56
NECAP1-201ENST00000339754 RABEP1Q15276 862 aa11.57□□□□□ -0.56
NECAP1-201ENST00000339754 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.57□□□□□ -0.56
NECAP1-201ENST00000339754 KIAA1210Q9ULL0 1709 aa11.56□□□□□ -0.56
NECAP1-201ENST00000339754 NSD3Q9BZ95 1437 aa11.56□□□□□ -0.56
NECAP1-201ENST00000339754 KIF20AO95235 890 aa11.56□□□□□ -0.56
NECAP1-201ENST00000339754 CBX1P83916 185 aa11.56□□□□□ -0.56
NECAP1-201ENST00000339754 KIAA2012Q0VF49 1180 aa11.56□□□□□ -0.56
NECAP1-201ENST00000339754 ADGRB2O60241 1585 aa11.56□□□□□ -0.56
NECAP1-201ENST00000339754 ATP2B3Q16720 1220 aa11.56□□□□□ -0.56
NECAP1-201ENST00000339754 PRIMPOLQ96LW4 560 aa11.56□□□□□ -0.56
NECAP1-201ENST00000339754 CWC22Q9HCG8 908 aaKnown RBP11.56□□□□□ -0.56
NECAP1-201ENST00000339754 KIDINS220Q9ULH0 1771 aa11.56□□□□□ -0.56
NECAP1-201ENST00000339754 PPIP5K1Q6PFW1 1433 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms