RNA–Protein interactions for RNA: ENST00000338700.9

TRIM2-201, Transcript of tripartite motif containing 2, humanhuman

TSL 1 (best) BASIC

Gene TRIM2, Length 6,735 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2-201ENST00000338700 CFAP70Q5T0N1 1121 aa9.4□□□□□ -0.91
TRIM2-201ENST00000338700 KIF6Q6ZMV9 814 aa9.4□□□□□ -0.91
TRIM2-201ENST00000338700 GOLGA6L19H0YKK7 550 aa9.39□□□□□ -0.91
TRIM2-201ENST00000338700 UBTFL1P0CB47 393 aaPredicted RBP9.39□□□□□ -0.91
TRIM2-201ENST00000338700 RAPGEF6Q8TEU7 1601 aa9.39□□□□□ -0.91
TRIM2-201ENST00000338700 TPM1P09493 284 aa9.39□□□□□ -0.91
TRIM2-201ENST00000338700 PDE4AP27815 886 aa9.39□□□□□ -0.91
TRIM2-201ENST00000338700 SKOR2Q2VWA4 1001 aaPredicted RBP9.39□□□□□ -0.91
TRIM2-201ENST00000338700 CCDC30Q5VVM6 783 aa9.39□□□□□ -0.91
TRIM2-201ENST00000338700 INTS3Q68E01 1043 aaKnown RBP9.39□□□□□ -0.91
TRIM2-201ENST00000338700 WWC1Q8IX03 1113 aa9.39□□□□□ -0.91
TRIM2-201ENST00000338700 HSPA2P54652 639 aa9.39□□□□□ -0.91
TRIM2-201ENST00000338700 FBXO31Q5XUX0 539 aaPredicted RBP9.39□□□□□ -0.91
TRIM2-201ENST00000338700 WDR97A6NE52 1622 aa9.39□□□□□ -0.91
TRIM2-201ENST00000338700 RTEL1-TNFRSF6BF6WH68 1400 aa9.39□□□□□ -0.91
TRIM2-201ENST00000338700 NEUROD6Q96NK8 337 aa9.38□□□□□ -0.91
TRIM2-201ENST00000338700 PDE4CQ08493 712 aa9.38□□□□□ -0.91
TRIM2-201ENST00000338700 CDK19Q9BWU1 502 aa9.38□□□□□ -0.91
TRIM2-201ENST00000338700 BRD4O60885 1362 aaPredicted RBP9.38□□□□□ -0.91
TRIM2-201ENST00000338700 MTHFSP49914 203 aa9.38□□□□□ -0.91
TRIM2-201ENST00000338700 DAPK1P53355 1430 aa9.38□□□□□ -0.91
TRIM2-201ENST00000338700 GOLGA6L1Q8N7Z2 621 aa9.38□□□□□ -0.91
TRIM2-201ENST00000338700 HOOK1Q9UJC3 728 aaKnown RBP9.38□□□□□ -0.91
TRIM2-201ENST00000338700 NINLQ9Y2I6 1382 aa9.38□□□□□ -0.91
TRIM2-201ENST00000338700 XPCQ01831 940 aaPredicted RBP9.38□□□□□ -0.91
TRIM2-201ENST00000338700 UHRF1BP1Q6BDS2 1440 aa9.38□□□□□ -0.91
TRIM2-201ENST00000338700 BECN2A8MW95 431 aa9.38□□□□□ -0.91
TRIM2-201ENST00000338700 AMOTL2Q9Y2J4 779 aa9.38□□□□□ -0.91
TRIM2-201ENST00000338700 ABCC2Q92887 1545 aa9.37□□□□□ -0.91
TRIM2-201ENST00000338700 CALRP27797 417 aaKnown RBP9.37□□□□□ -0.91
TRIM2-201ENST00000338700 ZNF518AQ6AHZ1 1483 aa9.37□□□□□ -0.91
TRIM2-201ENST00000338700 DDX49Q9Y6V7 483 aaKnown RBP9.37□□□□□ -0.91
TRIM2-201ENST00000338700 CAMSAP2Q08AD1 1489 aa9.37□□□□□ -0.91
TRIM2-201ENST00000338700 CCDC27Q2M243 656 aa9.37□□□□□ -0.91
TRIM2-201ENST00000338700 KIAA1107Q9UPP5 1409 aa9.37□□□□□ -0.91
TRIM2-201ENST00000338700 WASHC4Q2M389 1173 aa9.36□□□□□ -0.91
TRIM2-201ENST00000338700 RBM42Q9BTD8 480 aaKnown RBP9.36□□□□□ -0.91
TRIM2-201ENST00000338700 ANKRD30BQ9BXX2 1392 aa9.36□□□□□ -0.91
TRIM2-201ENST00000338700 PLCH2O75038 1416 aa9.36□□□□□ -0.91
TRIM2-201ENST00000338700 RALYLQ86SE5 291 aaKnown RBP9.36□□□□□ -0.91
TRIM2-201ENST00000338700 GNAI3P08754 354 aa9.36□□□□□ -0.91
TRIM2-201ENST00000338700 ANKRD20A12PQ8NF67 263 aa9.36□□□□□ -0.91
TRIM2-201ENST00000338700 DDX54Q8TDD1 881 aaKnown RBP9.36□□□□□ -0.91
TRIM2-201ENST00000338700 CCDC43Q96MW1 224 aaKnown RBP9.36□□□□□ -0.91
TRIM2-201ENST00000338700 SAFBQ15424 915 aaKnown RBP eCLIP9.35□□□□□ -0.91
TRIM2-201ENST00000338700 FOXD4L6Q3SYB3 417 aaPredicted RBP9.35□□□□□ -0.91
TRIM2-201ENST00000338700 FOXD4L3Q6VB84 417 aaPredicted RBP9.35□□□□□ -0.91
TRIM2-201ENST00000338700 TSHZ2Q9NRE2 1034 aa9.35□□□□□ -0.91
TRIM2-201ENST00000338700 SPG7Q9UQ90 795 aa9.35□□□□□ -0.91
TRIM2-201ENST00000338700 NCKAP5LQ9HCH0 1330 aa9.35□□□□□ -0.91
TRIM2-201ENST00000338700 DHX29Q7Z478 1369 aaKnown RBP9.35□□□□□ -0.91
TRIM2-201ENST00000338700 PNISRQ8TF01 805 aaKnown RBP9.34□□□□□ -0.91
TRIM2-201ENST00000338700 TBC1D2BQ9UPU7 963 aa9.34□□□□□ -0.91
TRIM2-201ENST00000338700 ATP10BO94823 1461 aa9.34□□□□□ -0.91
TRIM2-201ENST00000338700 PRKAR2BP31323 418 aa9.34□□□□□ -0.91
TRIM2-201ENST00000338700 CNTROBQ8N137 903 aa9.34□□□□□ -0.91
TRIM2-201ENST00000338700 SMC3Q9UQE7 1217 aa9.34□□□□□ -0.91
TRIM2-201ENST00000338700 FYB1O15117 783 aa9.34□□□□□ -0.91
TRIM2-201ENST00000338700 PCMTD1Q96MG8 357 aaPredicted RBP9.34□□□□□ -0.91
TRIM2-201ENST00000338700 PCF11O94913 1555 aaKnown RBP9.34□□□□□ -0.91
TRIM2-201ENST00000338700 TIAM1Q13009 1591 aa9.34□□□□□ -0.91
TRIM2-201ENST00000338700 PPP2R1AP30153 589 aa9.34□□□□□ -0.91
TRIM2-201ENST00000338700 KCNH5Q8NCM2 988 aa9.34□□□□□ -0.91
TRIM2-201ENST00000338700 CABP4P57796 275 aa9.34□□□□□ -0.91
TRIM2-201ENST00000338700 TCP11L2Q8N4U5 519 aa9.33□□□□□ -0.92
TRIM2-201ENST00000338700 LNPKQ9C0E8 428 aa9.33□□□□□ -0.92
TRIM2-201ENST00000338700 BRMS1Q9HCU9 246 aa9.33□□□□□ -0.92
TRIM2-201ENST00000338700 CTTNBP2Q8WZ74 1663 aa9.33□□□□□ -0.92
TRIM2-201ENST00000338700 ADAMTS8Q9UP79 889 aa9.33□□□□□ -0.92
TRIM2-201ENST00000338700 CLASRPQ8N2M8 674 aaKnown RBP9.33□□□□□ -0.92
TRIM2-201ENST00000338700 BICD2Q8TD16 824 aa9.33□□□□□ -0.92
TRIM2-201ENST00000338700 ERC1Q8IUD2 1116 aa9.33□□□□□ -0.92
TRIM2-201ENST00000338700 CEP170Q5SW79 1584 aa9.33□□□□□ -0.92
TRIM2-201ENST00000338700 CDC45O75419 566 aa9.32□□□□□ -0.92
TRIM2-201ENST00000338700 XBP1P17861 261 aa9.32□□□□□ -0.92
TRIM2-201ENST00000338700 PSMA5P28066 241 aa9.32□□□□□ -0.92
TRIM2-201ENST00000338700 ZC3H6P61129 1189 aaKnown RBP9.32□□□□□ -0.92
TRIM2-201ENST00000338700 NUP160Q12769 1436 aa9.32□□□□□ -0.92
TRIM2-201ENST00000338700 FAM177BA6PVY3 158 aa9.32□□□□□ -0.92
TRIM2-201ENST00000338700 FSD1Q9BTV5 496 aa9.32□□□□□ -0.92
TRIM2-201ENST00000338700 KIAA0556O60303 1618 aa9.32□□□□□ -0.92
TRIM2-201ENST00000338700 A2MP01023 1474 aa9.32□□□□□ -0.92
TRIM2-201ENST00000338700 SAMD1Q6SPF0 538 aaPredicted RBP9.32□□□□□ -0.92
TRIM2-201ENST00000338700 CCDC70Q6NSX1 233 aa9.32□□□□□ -0.92
TRIM2-201ENST00000338700 PANK1Q8TE04 598 aa9.32□□□□□ -0.92
TRIM2-201ENST00000338700 CABP1Q9NZU7 370 aa9.32□□□□□ -0.92
TRIM2-201ENST00000338700 VPS37CA5D8V6 355 aaPredicted RBP9.31□□□□□ -0.92
TRIM2-201ENST00000338700 HIP1O00291 1037 aa9.31□□□□□ -0.92
TRIM2-201ENST00000338700 SLC3A2P08195 630 aaKnown RBP9.31□□□□□ -0.92
TRIM2-201ENST00000338700 PHF8Q9UPP1 1060 aa9.31□□□□□ -0.92
TRIM2-201ENST00000338700 UHRF1BP1LA0JNW5 1464 aa9.31□□□□□ -0.92
TRIM2-201ENST00000338700 IPO7O95373 1038 aaKnown RBP9.31□□□□□ -0.92
TRIM2-201ENST00000338700 SART3Q15020 963 aaKnown RBP9.31□□□□□ -0.92
TRIM2-201ENST00000338700 TWISTNBQ3B726 338 aaPredicted RBP9.31□□□□□ -0.92
TRIM2-201ENST00000338700 KRT28Q7Z3Y7 464 aa9.31□□□□□ -0.92
TRIM2-201ENST00000338700 UGGT2Q9NYU1 1516 aa9.31□□□□□ -0.92
TRIM2-201ENST00000338700 IDI1Q13907 227 aa9.31□□□□□ -0.92
TRIM2-201ENST00000338700 GNL3LQ9NVN8 582 aaKnown RBP9.31□□□□□ -0.92
TRIM2-201ENST00000338700 SURF6O75683 361 aaKnown RBP9.31□□□□□ -0.92
TRIM2-201ENST00000338700 ATAD2Q6PL18 1390 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms