RNA–Protein interactions for RNA: ENST00000331428.5

XKR3-201, Transcript of XK related 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XKR3, Length 1,690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XKR3-201ENST00000331428 PROCA1Q8NCQ7 364 aaPredicted RBP7.13□□□□□ -1.27
XKR3-201ENST00000331428 CLUAP1Q96AJ1 413 aa7.13□□□□□ -1.27
XKR3-201ENST00000331428 APBB1O00213 710 aa7.12□□□□□ -1.27
XKR3-201ENST00000331428 MCM6Q14566 821 aa7.12□□□□□ -1.27
XKR3-201ENST00000331428 BMP1P13497 986 aa7.11□□□□□ -1.27
XKR3-201ENST00000331428 DNAJB2P25686 324 aa7.11□□□□□ -1.27
XKR3-201ENST00000331428 MYSM1Q5VVJ2 828 aa7.11□□□□□ -1.27
XKR3-201ENST00000331428 MSTNO14793 375 aa7.1□□□□□ -1.27
XKR3-201ENST00000331428 RBM46Q8TBY0 533 aaKnown RBP7.1□□□□□ -1.27
XKR3-201ENST00000331428 KRTAP4-12Q9BQ66 201 aa7.1□□□□□ -1.27
XKR3-201ENST00000331428 KRTAP4-8A0A0G2JLE6 195 aa7.09□□□□□ -1.27
XKR3-201ENST00000331428 A6NJR5 290 aa7.09□□□□□ -1.27
XKR3-201ENST00000331428 KRTAP9-9Q9BYP9 154 aa7.09□□□□□ -1.27
XKR3-201ENST00000331428 KRTAP9-4Q9BYQ2 154 aa7.09□□□□□ -1.27
XKR3-201ENST00000331428 CAPN5O15484 640 aaPredicted RBP7.08□□□□□ -1.28
XKR3-201ENST00000331428 TRAK2O60296 914 aa7.08□□□□□ -1.28
XKR3-201ENST00000331428 CLK2P49760 499 aaKnown RBP7.08□□□□□ -1.28
XKR3-201ENST00000331428 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.08□□□□□ -1.28
XKR3-201ENST00000331428 TBC1D2Q9BYX2 928 aa7.08□□□□□ -1.28
XKR3-201ENST00000331428 TRIM32Q13049 653 aa7.07□□□□□ -1.28
XKR3-201ENST00000331428 TMEM134Q9H6X4 195 aa7.07□□□□□ -1.28
XKR3-201ENST00000331428 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.06□□□□□ -1.28
XKR3-201ENST00000331428 RCCD1A6NED2 376 aa7.06□□□□□ -1.28
XKR3-201ENST00000331428 DIXDC1Q155Q3 683 aa7.05□□□□□ -1.28
XKR3-201ENST00000331428 POM121Q96HA1 1249 aa7.05□□□□□ -1.28
XKR3-201ENST00000331428 ZFP42Q96MM3 310 aa7.05□□□□□ -1.28
XKR3-201ENST00000331428 MARSP56192 900 aaKnown RBP7.04□□□□□ -1.28
XKR3-201ENST00000331428 PROSER2Q86WR7 435 aaPredicted RBP7.04□□□□□ -1.28
XKR3-201ENST00000331428 LIMD1Q9UGP4 676 aa7.04□□□□□ -1.28
XKR3-201ENST00000331428 RAD21O60216 631 aa7.03□□□□□ -1.28
XKR3-201ENST00000331428 RFC5P40937 340 aa7.03□□□□□ -1.28
XKR3-201ENST00000331428 PUS10Q3MIT2 529 aaKnown RBP7.03□□□□□ -1.28
XKR3-201ENST00000331428 CCDC82Q8N4S0 544 aa7.03□□□□□ -1.28
XKR3-201ENST00000331428 SPIRE2Q8WWL2 714 aa7.03□□□□□ -1.28
XKR3-201ENST00000331428 SCARF2Q96GP6 870 aaPredicted RBP7.03□□□□□ -1.28
XKR3-201ENST00000331428 SPDYE5A6NIY4 337 aa7.03□□□□□ -1.28
XKR3-201ENST00000331428 K7ELQ4 463 aaPredicted RBP7.03□□□□□ -1.28
XKR3-201ENST00000331428 SLC10A3P09131 477 aa7.03□□□□□ -1.28
XKR3-201ENST00000331428 CD46P15529 392 aa7.03□□□□□ -1.28
XKR3-201ENST00000331428 FBXO31Q5XUX0 539 aaPredicted RBP7.03□□□□□ -1.28
XKR3-201ENST00000331428 RIC3Q7Z5B4 369 aa7.03□□□□□ -1.28
XKR3-201ENST00000331428 FAM160A2Q8N612 972 aaPredicted RBP7.03□□□□□ -1.28
XKR3-201ENST00000331428 DDX11L8A8MPP1 907 aa7.02□□□□□ -1.29
XKR3-201ENST00000331428 ALDH1A1P00352 501 aa7.02□□□□□ -1.29
XKR3-201ENST00000331428 SNRKQ9NRH2 765 aa7.02□□□□□ -1.29
XKR3-201ENST00000331428 ZNF777Q9ULD5 760 aaPredicted RBP7.02□□□□□ -1.29
XKR3-201ENST00000331428 RC3H1Q5TC82 1133 aaKnown RBP7.01□□□□□ -1.29
XKR3-201ENST00000331428 ZNF385CQ66K41 422 aaPredicted RBP7.01□□□□□ -1.29
XKR3-201ENST00000331428 SULF1Q8IWU6 871 aa7.01□□□□□ -1.29
XKR3-201ENST00000331428 THAP11Q96EK4 314 aa7.01□□□□□ -1.29
XKR3-201ENST00000331428 SPOCK3Q9BQ16 436 aa7.01□□□□□ -1.29
XKR3-201ENST00000331428 FMNL1O95466 1100 aaPredicted RBP7□□□□□ -1.29
XKR3-201ENST00000331428 NUTM1Q86Y26 1132 aa7□□□□□ -1.29
XKR3-201ENST00000331428 FNBP4Q8N3X1 1017 aaPredicted RBP7□□□□□ -1.29
XKR3-201ENST00000331428 SVOPQ8N4V2 548 aa7□□□□□ -1.29
XKR3-201ENST00000331428 BANK1Q8NDB2 785 aa7□□□□□ -1.29
XKR3-201ENST00000331428 CSPP1Q1MSJ5 1256 aa7□□□□□ -1.29
XKR3-201ENST00000331428 PPP2R2DQ66LE6 453 aa7□□□□□ -1.29
XKR3-201ENST00000331428 CNTNAP3BQ96NU0 1288 aa7□□□□□ -1.29
XKR3-201ENST00000331428 CNTNAP3Q9BZ76 1288 aa7□□□□□ -1.29
XKR3-201ENST00000331428 COG6Q9Y2V7 657 aa7□□□□□ -1.29
XKR3-201ENST00000331428 MOXD2PA6NHM9 499 aa6.99□□□□□ -1.29
XKR3-201ENST00000331428 SPTLC1O15269 473 aa6.99□□□□□ -1.29
XKR3-201ENST00000331428 PLA2G4EQ3MJ16 856 aa6.99□□□□□ -1.29
XKR3-201ENST00000331428 TMEM259Q4ZIN3 620 aa6.99□□□□□ -1.29
XKR3-201ENST00000331428 RSBN1LQ6PCB5 846 aaPredicted RBP6.99□□□□□ -1.29
XKR3-201ENST00000331428 SCARF1Q14162 830 aa6.98□□□□□ -1.29
XKR3-201ENST00000331428 PODXL2Q9NZ53 605 aa6.98□□□□□ -1.29
XKR3-201ENST00000331428 PPFIA3O75145 1194 aa6.97□□□□□ -1.29
XKR3-201ENST00000331428 NDUFV2P19404 249 aa6.97□□□□□ -1.29
XKR3-201ENST00000331428 KRT76Q01546 638 aa6.97□□□□□ -1.29
XKR3-201ENST00000331428 TUSC1Q2TAM9 212 aa6.97□□□□□ -1.29
XKR3-201ENST00000331428 RDH13Q8NBN7 331 aa6.97□□□□□ -1.29
XKR3-201ENST00000331428 ARHGEF15O94989 841 aa6.96□□□□□ -1.29
XKR3-201ENST00000331428 WNT7BP56706 349 aa6.96□□□□□ -1.29
XKR3-201ENST00000331428 QPCTQ16769 361 aa6.96□□□□□ -1.29
XKR3-201ENST00000331428 RSPH4AQ5TD94 716 aa6.96□□□□□ -1.29
XKR3-201ENST00000331428 GALNT6Q8NCL4 622 aa6.96□□□□□ -1.29
XKR3-201ENST00000331428 PRDM9Q9NQV7 894 aa6.96□□□□□ -1.29
XKR3-201ENST00000331428 TRIM26Q12899 539 aaPredicted RBP6.96□□□□□ -1.3
XKR3-201ENST00000331428 MTMR14Q8NCE2 650 aa6.96□□□□□ -1.3
XKR3-201ENST00000331428 SALL2Q9Y467 1007 aaPredicted RBP6.96□□□□□ -1.3
XKR3-201ENST00000331428 WASF2Q9Y6W5 498 aa6.96□□□□□ -1.3
XKR3-201ENST00000331428 MSS51Q4VC12 460 aa6.95□□□□□ -1.3
XKR3-201ENST00000331428 MORN1Q5T089 497 aa6.95□□□□□ -1.3
XKR3-201ENST00000331428 ZNF330Q9Y3S2 320 aaPredicted RBP6.95□□□□□ -1.3
XKR3-201ENST00000331428 PCDHB15Q9Y5E8 787 aa6.95□□□□□ -1.3
XKR3-201ENST00000331428 SOBPA7XYQ1 873 aa6.94□□□□□ -1.3
XKR3-201ENST00000331428 CCDC97Q96F63 343 aaPredicted RBP6.94□□□□□ -1.3
XKR3-201ENST00000331428 GDPD2Q9HCC8 539 aa6.94□□□□□ -1.3
XKR3-201ENST00000331428 NUTM2BA6NNL0 878 aaPredicted RBP6.93□□□□□ -1.3
XKR3-201ENST00000331428 NUTM2EB1AL46 878 aaPredicted RBP6.93□□□□□ -1.3
XKR3-201ENST00000331428 LILRB3O75022 631 aa6.93□□□□□ -1.3
XKR3-201ENST00000331428 KDM4AO75164 1064 aa6.93□□□□□ -1.3
XKR3-201ENST00000331428 AP1G2O75843 785 aa6.93□□□□□ -1.3
XKR3-201ENST00000331428 GJA5P36382 358 aa6.93□□□□□ -1.3
XKR3-201ENST00000331428 RTL5Q5HYW3 569 aaPredicted RBP6.93□□□□□ -1.3
XKR3-201ENST00000331428 NUTM2DQ5VT03 806 aaPredicted RBP6.93□□□□□ -1.3
XKR3-201ENST00000331428 MRPL14Q6P1L8 145 aaKnown RBP6.93□□□□□ -1.3
XKR3-201ENST00000331428 NUTM2AQ8IVF1 878 aaPredicted RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms