RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 PSME1Q06323 249 aa12.9□□□□□ -0.34
C11orf54-201ENST00000331239 NGDNQ8NEJ9 315 aaKnown RBP12.9□□□□□ -0.34
C11orf54-201ENST00000331239 NPHP3Q7Z494 1330 aa12.9□□□□□ -0.35
C11orf54-201ENST00000331239 USP31Q70CQ4 1352 aa12.9□□□□□ -0.35
C11orf54-201ENST00000331239 TOM1O60784 492 aa12.89□□□□□ -0.35
C11orf54-201ENST00000331239 ESCO1Q5FWF5 840 aa12.89□□□□□ -0.35
C11orf54-201ENST00000331239 PARD3Q8TEW0 1356 aa12.89□□□□□ -0.35
C11orf54-201ENST00000331239 NHSL1Q5SYE7 1610 aa12.88□□□□□ -0.35
C11orf54-201ENST00000331239 KCNA4P22459 653 aa12.88□□□□□ -0.35
C11orf54-201ENST00000331239 TRPM3Q9HCF6 1732 aaPredicted RBP12.87□□□□□ -0.35
C11orf54-201ENST00000331239 TTC21BQ7Z4L5 1316 aa12.87□□□□□ -0.35
C11orf54-201ENST00000331239 CCER2I3L3R5 266 aa12.87□□□□□ -0.35
C11orf54-201ENST00000331239 AHDC1Q5TGY3 1603 aaPredicted RBP12.87□□□□□ -0.35
C11orf54-201ENST00000331239 CERKQ8TCT0 537 aa12.87□□□□□ -0.35
C11orf54-201ENST00000331239 PRKRIP1Q9H875 184 aaPredicted RBP12.87□□□□□ -0.35
C11orf54-201ENST00000331239 RBM33Q96EV2 1170 aaKnown RBP12.86□□□□□ -0.35
C11orf54-201ENST00000331239 BRINP3Q76B58 766 aa12.85□□□□□ -0.35
C11orf54-201ENST00000331239 SUPT16HQ9Y5B9 1047 aaKnown RBP12.85□□□□□ -0.35
C11orf54-201ENST00000331239 FYB1O15117 783 aa12.85□□□□□ -0.35
C11orf54-201ENST00000331239 AATKQ6ZMQ8 1374 aa12.84□□□□□ -0.35
C11orf54-201ENST00000331239 SOS2Q07890 1332 aaPredicted RBP12.84□□□□□ -0.35
C11orf54-201ENST00000331239 PXDNQ92626 1479 aa12.84□□□□□ -0.35
C11orf54-201ENST00000331239 ORAI2Q96SN7 254 aa12.84□□□□□ -0.35
C11orf54-201ENST00000331239 ALS2Q96Q42 1657 aa12.84□□□□□ -0.35
C11orf54-201ENST00000331239 ARHGEF10O15013 1369 aa12.83□□□□□ -0.35
C11orf54-201ENST00000331239 MYBBP1AQ9BQG0 1328 aaKnown RBP12.83□□□□□ -0.36
C11orf54-201ENST00000331239 PMFBP1Q8TBY8 1022 aa12.83□□□□□ -0.36
C11orf54-201ENST00000331239 KIF24Q5T7B8 1368 aa12.83□□□□□ -0.36
C11orf54-201ENST00000331239 OVOS2A0A0J9YW53 1432 aa12.83□□□□□ -0.36
C11orf54-201ENST00000331239 OVOS2Q6IE36 1432 aa12.83□□□□□ -0.36
C11orf54-201ENST00000331239 KRT28Q7Z3Y7 464 aa12.83□□□□□ -0.36
C11orf54-201ENST00000331239 MED1Q15648 1581 aaPredicted RBP12.82□□□□□ -0.36
C11orf54-201ENST00000331239 ROBO1Q9Y6N7 1651 aa12.82□□□□□ -0.36
C11orf54-201ENST00000331239 NUTM2FA1L443 756 aa12.82□□□□□ -0.36
C11orf54-201ENST00000331239 COG3Q96JB2 828 aa12.82□□□□□ -0.36
C11orf54-201ENST00000331239 PIK3C2AO00443 1686 aa12.81□□□□□ -0.36
C11orf54-201ENST00000331239 MORC1Q86VD1 984 aa12.81□□□□□ -0.36
C11orf54-201ENST00000331239 TNS3Q68CZ2 1445 aa12.81□□□□□ -0.36
C11orf54-201ENST00000331239 NLRP13Q86W25 1043 aa12.81□□□□□ -0.36
C11orf54-201ENST00000331239 INSRP06213 1382 aa12.8□□□□□ -0.36
C11orf54-201ENST00000331239 ERICH6Q7L0X2 663 aa12.8□□□□□ -0.36
C11orf54-201ENST00000331239 ABCC6O95255 1503 aa12.8□□□□□ -0.36
C11orf54-201ENST00000331239 FOXO3O43524 673 aa12.8□□□□□ -0.36
C11orf54-201ENST00000331239 KCNH5Q8NCM2 988 aa12.8□□□□□ -0.36
C11orf54-201ENST00000331239 SMG6Q86US8 1419 aaKnown RBP12.79□□□□□ -0.36
C11orf54-201ENST00000331239 SPATA31A3Q5VYP0 1347 aa12.79□□□□□ -0.36
C11orf54-201ENST00000331239 SLIT3O75094 1523 aa12.79□□□□□ -0.36
C11orf54-201ENST00000331239 PHRF1Q9P1Y6 1649 aaKnown RBP12.79□□□□□ -0.36
C11orf54-201ENST00000331239 USP19O94966 1318 aa12.79□□□□□ -0.36
C11orf54-201ENST00000331239 MARF1Q9Y4F3 1742 aaKnown RBP12.79□□□□□ -0.36
C11orf54-201ENST00000331239 COL22A1Q8NFW1 1626 aaPredicted RBP12.78□□□□□ -0.36
C11orf54-201ENST00000331239 LRRC59Q96AG4 307 aaKnown RBP12.78□□□□□ -0.36
C11orf54-201ENST00000331239 CC2D1BQ5T0F9 858 aaKnown RBP12.77□□□□□ -0.37
C11orf54-201ENST00000331239 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.77□□□□□ -0.37
C11orf54-201ENST00000331239 ABTB2Q8N961 1025 aa12.77□□□□□ -0.37
C11orf54-201ENST00000331239 UBAP1LF5GYI3 381 aa12.77□□□□□ -0.37
C11orf54-201ENST00000331239 PPP2R1AP30153 589 aa12.77□□□□□ -0.37
C11orf54-201ENST00000331239 NME9Q86XW9 330 aa12.76□□□□□ -0.37
C11orf54-201ENST00000331239 RTL1A6NKG5 1358 aa12.75□□□□□ -0.37
C11orf54-201ENST00000331239 PHLPP1O60346 1717 aa12.75□□□□□ -0.37
C11orf54-201ENST00000331239 CRYBG1Q9Y4K1 1723 aa12.75□□□□□ -0.37
C11orf54-201ENST00000331239 MAP2P11137 1827 aaKnown RBP12.75□□□□□ -0.37
C11orf54-201ENST00000331239 NLRP6P59044 892 aa12.75□□□□□ -0.37
C11orf54-201ENST00000331239 GGNBP2Q9H3C7 697 aa12.75□□□□□ -0.37
C11orf54-201ENST00000331239 PNPLA6Q8IY17 1366 aa12.75□□□□□ -0.37
C11orf54-201ENST00000331239 COL16A1Q07092 1604 aaPredicted RBP12.75□□□□□ -0.37
C11orf54-201ENST00000331239 CDK12Q9NYV4 1490 aaPredicted RBP12.74□□□□□ -0.37
C11orf54-201ENST00000331239 CFAP53Q96M91 514 aa12.74□□□□□ -0.37
C11orf54-201ENST00000331239 NFAT5O94916 1531 aa12.74□□□□□ -0.37
C11orf54-201ENST00000331239 PAK3O75914 559 aaPredicted RBP12.73□□□□□ -0.37
C11orf54-201ENST00000331239 CPDO75976 1380 aa12.73□□□□□ -0.37
C11orf54-201ENST00000331239 SHPRHQ149N8 1683 aa12.73□□□□□ -0.37
C11orf54-201ENST00000331239 POLKQ9UBT6 870 aa12.7□□□□□ -0.38
C11orf54-201ENST00000331239 ABCA3Q99758 1704 aa12.7□□□□□ -0.38
C11orf54-201ENST00000331239 GCP02774 474 aa12.69□□□□□ -0.38
C11orf54-201ENST00000331239 FLT4P35916 1363 aa12.69□□□□□ -0.38
C11orf54-201ENST00000331239 BLMP54132 1417 aaPredicted RBP12.69□□□□□ -0.38
C11orf54-201ENST00000331239 MTHFSP49914 203 aa12.68□□□□□ -0.38
C11orf54-201ENST00000331239 PLEKHG2Q9H7P9 1386 aa12.68□□□□□ -0.38
C11orf54-201ENST00000331239 LTN1O94822 1766 aa12.68□□□□□ -0.38
C11orf54-201ENST00000331239 COL3A1P02461 1466 aaPredicted RBP12.68□□□□□ -0.38
C11orf54-201ENST00000331239 JCADQ9P266 1359 aa12.68□□□□□ -0.38
C11orf54-201ENST00000331239 NUDCQ9Y266 331 aa12.68□□□□□ -0.38
C11orf54-201ENST00000331239 ARHGEF25Q86VW2 580 aa12.67□□□□□ -0.38
C11orf54-201ENST00000331239 MRS2Q9HD23 443 aa12.67□□□□□ -0.38
C11orf54-201ENST00000331239 IP6K1Q92551 441 aa12.67□□□□□ -0.38
C11orf54-201ENST00000331239 PNNQ9H307 717 aaKnown RBP12.67□□□□□ -0.38
C11orf54-201ENST00000331239 FAM208AQ9UK61 1670 aaKnown RBP12.66□□□□□ -0.38
C11orf54-201ENST00000331239 XPCQ01831 940 aaPredicted RBP12.66□□□□□ -0.38
C11orf54-201ENST00000331239 NCBP3Q53F19 620 aaKnown RBP12.66□□□□□ -0.38
C11orf54-201ENST00000331239 PNISRQ8TF01 805 aaKnown RBP12.66□□□□□ -0.38
C11orf54-201ENST00000331239 ZRANB1Q9UGI0 708 aa12.66□□□□□ -0.38
C11orf54-201ENST00000331239 SPATA31A6Q5VVP1 1343 aa12.66□□□□□ -0.38
C11orf54-201ENST00000331239 COL18A1P39060 1754 aa12.66□□□□□ -0.38
C11orf54-201ENST00000331239 NEFLP07196 543 aa12.65□□□□□ -0.38
C11orf54-201ENST00000331239 NGEFQ8N5V2 710 aa12.65□□□□□ -0.38
C11orf54-201ENST00000331239 MAP3K19Q56UN5 1328 aa12.65□□□□□ -0.38
C11orf54-201ENST00000331239 FKBP8Q14318 412 aa12.65□□□□□ -0.38
C11orf54-201ENST00000331239 DDX17Q92841 729 aaKnown RBP12.65□□□□□ -0.38
C11orf54-201ENST00000331239 PEAK1Q9H792 1746 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms