RNA–Protein interactions for RNA: ENST00000330133.4

MRPL54-201, Transcript of mitochondrial ribosomal protein L54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL54, Length 626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54-201ENST00000330133 CABLES1Q8TDN4 633 aa26.5■■□□□ 1.83
MRPL54-201ENST00000330133 HSPA5P11021 654 aaKnown RBP26.49■■□□□ 1.83
MRPL54-201ENST00000330133 NGLY1Q96IV0 654 aa26.49■■□□□ 1.83
MRPL54-201ENST00000330133 RGS17Q9UGC6 210 aaPredicted RBP26.49■■□□□ 1.83
MRPL54-201ENST00000330133 TRPM3Q9HCF6 1732 aaPredicted RBP26.48■■□□□ 1.83
MRPL54-201ENST00000330133 HDGFL2Q7Z4V5 671 aaPredicted RBP26.47■■□□□ 1.83
MRPL54-201ENST00000330133 ABTB2Q8N961 1025 aa26.47■■□□□ 1.83
MRPL54-201ENST00000330133 SLC12A5Q9H2X9 1139 aa26.47■■□□□ 1.83
MRPL54-201ENST00000330133 ZNF772Q68DY9 489 aaPredicted RBP26.46■■□□□ 1.83
MRPL54-201ENST00000330133 USP6P35125 1406 aa26.46■■□□□ 1.83
MRPL54-201ENST00000330133 AFF2P51816 1311 aa26.45■■□□□ 1.83
MRPL54-201ENST00000330133 NUTM2GQ5VZR2 741 aa26.45■■□□□ 1.82
MRPL54-201ENST00000330133 TERF2IPQ9NYB0 399 aa26.45■■□□□ 1.82
MRPL54-201ENST00000330133 KTN1Q86UP2 1357 aaKnown RBP26.44■■□□□ 1.82
MRPL54-201ENST00000330133 NINLQ9Y2I6 1382 aa26.43■■□□□ 1.82
MRPL54-201ENST00000330133 CPSF1Q10570 1443 aaKnown RBP26.42■■□□□ 1.82
MRPL54-201ENST00000330133 ALS2Q96Q42 1657 aa26.42■■□□□ 1.82
MRPL54-201ENST00000330133 TTC21BQ7Z4L5 1316 aa26.41■■□□□ 1.82
MRPL54-201ENST00000330133 NLRP13Q86W25 1043 aa26.41■■□□□ 1.82
MRPL54-201ENST00000330133 POTEAQ6S8J7 498 aa26.4■■□□□ 1.82
MRPL54-201ENST00000330133 SSH2Q76I76 1423 aa26.39■■□□□ 1.81
MRPL54-201ENST00000330133 TTC21AQ8NDW8 1320 aa26.39■■□□□ 1.81
MRPL54-201ENST00000330133 NLRP6P59044 892 aa26.38■■□□□ 1.81
MRPL54-201ENST00000330133 ILDR2Q71H61 639 aa26.38■■□□□ 1.81
MRPL54-201ENST00000330133 FNBP4Q8N3X1 1017 aaPredicted RBP26.38■■□□□ 1.81
MRPL54-201ENST00000330133 USP21Q9UK80 565 aa26.37■■□□□ 1.81
MRPL54-201ENST00000330133 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.35■■□□□ 1.81
MRPL54-201ENST00000330133 POLR3GLQ9BT43 218 aa26.35■■□□□ 1.81
MRPL54-201ENST00000330133 CD163L1Q9NR16 1453 aa26.35■■□□□ 1.81
MRPL54-201ENST00000330133 QTRT2Q9H974 415 aaKnown RBP26.34■■□□□ 1.81
MRPL54-201ENST00000330133 A0A1W2PP64 1363 aa26.33■■□□□ 1.81
MRPL54-201ENST00000330133 USP19O94966 1318 aa26.33■■□□□ 1.81
MRPL54-201ENST00000330133 FAM83GA6ND36 823 aa26.32■■□□□ 1.8
MRPL54-201ENST00000330133 AKAP12Q02952 1782 aa26.32■■□□□ 1.8
MRPL54-201ENST00000330133 ANKRD36BQ8N2N9 1353 aa26.31■■□□□ 1.8
MRPL54-201ENST00000330133 EDC4Q6P2E9 1401 aaKnown RBP26.31■■□□□ 1.8
MRPL54-201ENST00000330133 GCP02774 474 aa26.3■■□□□ 1.8
MRPL54-201ENST00000330133 ZC3H6P61129 1189 aaKnown RBP26.3■■□□□ 1.8
MRPL54-201ENST00000330133 PRDM11Q9NQV5 511 aa26.3■■□□□ 1.8
MRPL54-201ENST00000330133 TRPC5Q9UL62 973 aaPredicted RBP26.3■■□□□ 1.8
MRPL54-201ENST00000330133 RXRBP28702 533 aa26.29■■□□□ 1.8
MRPL54-201ENST00000330133 UNC5CLQ8IV45 518 aa26.28■■□□□ 1.8
MRPL54-201ENST00000330133 ABCA3Q99758 1704 aa26.28■■□□□ 1.8
MRPL54-201ENST00000330133 NME9Q86XW9 330 aa26.27■■□□□ 1.8
MRPL54-201ENST00000330133 MARF1Q9Y4F3 1742 aaKnown RBP26.27■■□□□ 1.8
MRPL54-201ENST00000330133 SLIT2O94813 1529 aa26.26■■□□□ 1.79
MRPL54-201ENST00000330133 KIAA0232Q92628 1395 aa26.26■■□□□ 1.79
MRPL54-201ENST00000330133 MON2Q7Z3U7 1717 aa26.25■■□□□ 1.79
MRPL54-201ENST00000330133 BCL9LQ86UU0 1499 aa26.25■■□□□ 1.79
MRPL54-201ENST00000330133 KCNH5Q8NCM2 988 aa26.25■■□□□ 1.79
MRPL54-201ENST00000330133 RBM6P78332 1123 aaKnown RBP26.24■■□□□ 1.79
MRPL54-201ENST00000330133 CHRNA2Q15822 529 aa26.24■■□□□ 1.79
MRPL54-201ENST00000330133 BTG4Q9NY30 223 aa26.24■■□□□ 1.79
MRPL54-201ENST00000330133 ZRANB1Q9UGI0 708 aa26.24■■□□□ 1.79
MRPL54-201ENST00000330133 USP31Q70CQ4 1352 aa26.23■■□□□ 1.79
MRPL54-201ENST00000330133 CRYBG1Q9Y4K1 1723 aa26.23■■□□□ 1.79
MRPL54-201ENST00000330133 NRKQ7Z2Y5 1582 aa26.23■■□□□ 1.79
MRPL54-201ENST00000330133 PIK3C2AO00443 1686 aa26.22■■□□□ 1.79
MRPL54-201ENST00000330133 C11orf95C9JLR9 678 aaPredicted RBP26.22■■□□□ 1.79
MRPL54-201ENST00000330133 ATRNO75882 1429 aa26.22■■□□□ 1.79
MRPL54-201ENST00000330133 CPDO75976 1380 aa26.21■■□□□ 1.79
MRPL54-201ENST00000330133 PHRF1Q9P1Y6 1649 aaKnown RBP26.21■■□□□ 1.79
MRPL54-201ENST00000330133 ZBTB7CA1YPR0 619 aa26.21■■□□□ 1.79
MRPL54-201ENST00000330133 SOX12O15370 315 aa26.2■■□□□ 1.78
MRPL54-201ENST00000330133 SLIT3O75094 1523 aa26.19■■□□□ 1.78
MRPL54-201ENST00000330133 CCDC9Q9Y3X0 531 aaKnown RBP26.19■■□□□ 1.78
MRPL54-201ENST00000330133 COL14A1Q05707 1796 aaKnown RBP26.18■■□□□ 1.78
MRPL54-201ENST00000330133 VPS72Q15906 364 aa26.18■■□□□ 1.78
MRPL54-201ENST00000330133 COG3Q96JB2 828 aa26.18■■□□□ 1.78
MRPL54-201ENST00000330133 GJD4Q96KN9 370 aaPredicted RBP26.18■■□□□ 1.78
MRPL54-201ENST00000330133 CARD14Q9BXL6 1004 aa26.17■■□□□ 1.78
MRPL54-201ENST00000330133 EVA1CP58658 441 aa26.16■■□□□ 1.78
MRPL54-201ENST00000330133 KIF7Q2M1P5 1343 aa26.14■■□□□ 1.78
MRPL54-201ENST00000330133 FYB1O15117 783 aa26.14■■□□□ 1.78
MRPL54-201ENST00000330133 ARHGEF25Q86VW2 580 aa26.14■■□□□ 1.78
MRPL54-201ENST00000330133 PLCH1Q4KWH8 1693 aa26.13■■□□□ 1.77
MRPL54-201ENST00000330133 PANK3Q9H999 370 aa26.13■■□□□ 1.77
MRPL54-201ENST00000330133 STRN4Q9NRL3 753 aa26.13■■□□□ 1.77
MRPL54-201ENST00000330133 NWD2Q9ULI1 1742 aa26.13■■□□□ 1.77
MRPL54-201ENST00000330133 NSD3Q9BZ95 1437 aa26.13■■□□□ 1.77
MRPL54-201ENST00000330133 MYOM1P52179 1685 aa26.12■■□□□ 1.77
MRPL54-201ENST00000330133 AATKQ6ZMQ8 1374 aa26.12■■□□□ 1.77
MRPL54-201ENST00000330133 GGNBP2Q9H3C7 697 aa26.12■■□□□ 1.77
MRPL54-201ENST00000330133 CDK12Q9NYV4 1490 aaPredicted RBP26.11■■□□□ 1.77
MRPL54-201ENST00000330133 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.11■■□□□ 1.77
MRPL54-201ENST00000330133 ZEB1P37275 1124 aaPredicted RBP26.11■■□□□ 1.77
MRPL54-201ENST00000330133 OVOS2A0A0J9YW53 1432 aa26.11■■□□□ 1.77
MRPL54-201ENST00000330133 OVOS2Q6IE36 1432 aa26.11■■□□□ 1.77
MRPL54-201ENST00000330133 SOCS7O14512 581 aa26.09■■□□□ 1.77
MRPL54-201ENST00000330133 CGNL1Q0VF96 1302 aa26.09■■□□□ 1.77
MRPL54-201ENST00000330133 NFAT5O94916 1531 aa26.07■■□□□ 1.76
MRPL54-201ENST00000330133 USP54Q70EL1 1684 aa26.06■■□□□ 1.76
MRPL54-201ENST00000330133 CAMTA1Q9Y6Y1 1673 aa26.06■■□□□ 1.76
MRPL54-201ENST00000330133 SPATA31A5Q5VU36 1347 aa26.06■■□□□ 1.76
MRPL54-201ENST00000330133 SPATA31A7Q8IWB4 1347 aa26.06■■□□□ 1.76
MRPL54-201ENST00000330133 CCDC7Q96M83 1385 aa26.05■■□□□ 1.76
MRPL54-201ENST00000330133 NRAPQ86VF7 1730 aa26.05■■□□□ 1.76
MRPL54-201ENST00000330133 RGS12O14924 1447 aa26.05■■□□□ 1.76
MRPL54-201ENST00000330133 LARP1Q6PKG0 1096 aaKnown RBP26.04■■□□□ 1.76
MRPL54-201ENST00000330133 AXIN2Q9Y2T1 843 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms