RNA–Protein interactions for RNA: ENST00000319242.7

GFRA4-202, Transcript of GDNF family receptor alpha 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene GFRA4, Length 900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA4-202ENST00000319242 USP21Q9UK80 565 aa37.86■■■■□ 3.65
GFRA4-202ENST00000319242 MARF1Q9Y4F3 1742 aaKnown RBP37.84■■■■□ 3.65
GFRA4-202ENST00000319242 RXRBP28702 533 aa37.83■■■■□ 3.65
GFRA4-202ENST00000319242 ST20-MTHFSA0A0A6YYL1 179 aa37.79■■■■□ 3.64
GFRA4-202ENST00000319242 ATAD2Q6PL18 1390 aa37.79■■■■□ 3.64
GFRA4-202ENST00000319242 ABCA3Q99758 1704 aa37.78■■■■□ 3.64
GFRA4-202ENST00000319242 TRPC5Q9UL62 973 aaPredicted RBP37.75■■■■□ 3.63
GFRA4-202ENST00000319242 BCL9LQ86UU0 1499 aa37.75■■■■□ 3.63
GFRA4-202ENST00000319242 RBM6P78332 1123 aaKnown RBP37.74■■■■□ 3.63
GFRA4-202ENST00000319242 NUTM2GQ5VZR2 741 aa37.74■■■■□ 3.63
GFRA4-202ENST00000319242 TESK2Q96S53 571 aa37.74■■■■□ 3.63
GFRA4-202ENST00000319242 ABTB2Q8N961 1025 aa37.73■■■■□ 3.63
GFRA4-202ENST00000319242 BRD4O60885 1362 aaPredicted RBP37.72■■■■□ 3.63
GFRA4-202ENST00000319242 SLIT2O94813 1529 aa37.71■■■■□ 3.63
GFRA4-202ENST00000319242 USP6P35125 1406 aa37.71■■■■□ 3.63
GFRA4-202ENST00000319242 USP47Q96K76 1375 aa37.7■■■■□ 3.63
GFRA4-202ENST00000319242 ATRNO75882 1429 aa37.7■■■■□ 3.62
GFRA4-202ENST00000319242 FAM83GA6ND36 823 aa37.69■■■■□ 3.62
GFRA4-202ENST00000319242 UNC5CLQ8IV45 518 aa37.69■■■■□ 3.62
GFRA4-202ENST00000319242 ZNF692Q9BU19 519 aaPredicted RBP37.69■■■■□ 3.62
GFRA4-202ENST00000319242 SLC24A1O60721 1099 aa37.67■■■■□ 3.62
GFRA4-202ENST00000319242 CRYBG1Q9Y4K1 1723 aa37.67■■■■□ 3.62
GFRA4-202ENST00000319242 CDK12Q9NYV4 1490 aaPredicted RBP37.66■■■■□ 3.62
GFRA4-202ENST00000319242 PUS7Q96PZ0 661 aaKnown RBP37.66■■■■□ 3.62
GFRA4-202ENST00000319242 SSH2Q76I76 1423 aa37.64■■■■□ 3.62
GFRA4-202ENST00000319242 NLRP13Q86W25 1043 aa37.63■■■■□ 3.61
GFRA4-202ENST00000319242 CPSF1Q10570 1443 aaKnown RBP37.62■■■■□ 3.61
GFRA4-202ENST00000319242 TMC1Q8TDI8 760 aa37.62■■■■□ 3.61
GFRA4-202ENST00000319242 TNKS1BP1Q9C0C2 1729 aaKnown RBP37.6■■■■□ 3.61
GFRA4-202ENST00000319242 GJD4Q96KN9 370 aaPredicted RBP37.59■■■■□ 3.61
GFRA4-202ENST00000319242 SLC12A5Q9H2X9 1139 aa37.59■■■■□ 3.61
GFRA4-202ENST00000319242 AKAP12Q02952 1782 aa37.59■■■■□ 3.61
GFRA4-202ENST00000319242 USP19O94966 1318 aa37.59■■■■□ 3.61
GFRA4-202ENST00000319242 PLCH1Q4KWH8 1693 aa37.58■■■■□ 3.61
GFRA4-202ENST00000319242 UPF1Q92900 1129 aaKnown RBP eCLIP37.58■■■■□ 3.61
GFRA4-202ENST00000319242 PRDM11Q9NQV5 511 aa37.58■■■■□ 3.61
GFRA4-202ENST00000319242 TTC21BQ7Z4L5 1316 aa37.58■■■■□ 3.61
GFRA4-202ENST00000319242 PHRF1Q9P1Y6 1649 aaKnown RBP37.58■■■■□ 3.61
GFRA4-202ENST00000319242 KTN1Q86UP2 1357 aaKnown RBP37.57■■■■□ 3.61
GFRA4-202ENST00000319242 RGS12O14924 1447 aa37.57■■■■□ 3.6
GFRA4-202ENST00000319242 NLRP6P59044 892 aa37.57■■■■□ 3.6
GFRA4-202ENST00000319242 ZC3H6P61129 1189 aaKnown RBP37.57■■■■□ 3.6
GFRA4-202ENST00000319242 NWD2Q9ULI1 1742 aa37.56■■■■□ 3.6
GFRA4-202ENST00000319242 BTG4Q9NY30 223 aa37.56■■■■□ 3.6
GFRA4-202ENST00000319242 KIAA0232Q92628 1395 aa37.55■■■■□ 3.6
GFRA4-202ENST00000319242 TMF1P82094 1093 aa37.55■■■■□ 3.6
GFRA4-202ENST00000319242 COL14A1Q05707 1796 aaKnown RBP37.55■■■■□ 3.6
GFRA4-202ENST00000319242 VPS72Q15906 364 aa37.53■■■■□ 3.6
GFRA4-202ENST00000319242 TTC21AQ8NDW8 1320 aa37.53■■■■□ 3.6
GFRA4-202ENST00000319242 CD163L1Q9NR16 1453 aa37.52■■■■□ 3.6
GFRA4-202ENST00000319242 GCP02774 474 aa37.52■■■■□ 3.6
GFRA4-202ENST00000319242 HDGFL2Q7Z4V5 671 aaPredicted RBP37.52■■■■□ 3.6
GFRA4-202ENST00000319242 CHRNA2Q15822 529 aa37.51■■■■□ 3.6
GFRA4-202ENST00000319242 TERF2IPQ9NYB0 399 aa37.49■■■■□ 3.59
GFRA4-202ENST00000319242 CCDC9Q9Y3X0 531 aaKnown RBP37.49■■■■□ 3.59
GFRA4-202ENST00000319242 NRKQ7Z2Y5 1582 aa37.49■■■■□ 3.59
GFRA4-202ENST00000319242 PIK3C2AO00443 1686 aa37.48■■■■□ 3.59
GFRA4-202ENST00000319242 MON2Q7Z3U7 1717 aa37.47■■■■□ 3.59
GFRA4-202ENST00000319242 NINLQ9Y2I6 1382 aa37.46■■■■□ 3.59
GFRA4-202ENST00000319242 GLI3P10071 1580 aa37.46■■■■□ 3.59
GFRA4-202ENST00000319242 CPDO75976 1380 aa37.45■■■■□ 3.59
GFRA4-202ENST00000319242 NRAPQ86VF7 1730 aa37.45■■■■□ 3.59
GFRA4-202ENST00000319242 SUGP2Q8IX01 1082 aaKnown RBP eCLIP37.45■■■■□ 3.59
GFRA4-202ENST00000319242 A0A1W2PP64 1363 aa37.43■■■■□ 3.58
GFRA4-202ENST00000319242 SLIT3O75094 1523 aa37.42■■■■□ 3.58
GFRA4-202ENST00000319242 CDCA8Q53HL2 280 aa37.42■■■■□ 3.58
GFRA4-202ENST00000319242 EDC4Q6P2E9 1401 aaKnown RBP37.39■■■■□ 3.58
GFRA4-202ENST00000319242 EIF4G2P78344 907 aaKnown RBP eCLIP37.38■■■■□ 3.57
GFRA4-202ENST00000319242 NME9Q86XW9 330 aa37.37■■■■□ 3.57
GFRA4-202ENST00000319242 ZRANB1Q9UGI0 708 aa37.37■■■■□ 3.57
GFRA4-202ENST00000319242 KCNH5Q8NCM2 988 aa37.36■■■■□ 3.57
GFRA4-202ENST00000319242 STRN4Q9NRL3 753 aa37.36■■■■□ 3.57
GFRA4-202ENST00000319242 USP31Q70CQ4 1352 aa37.35■■■■□ 3.57
GFRA4-202ENST00000319242 ZBTB7CA1YPR0 619 aa37.35■■■■□ 3.57
GFRA4-202ENST00000319242 SPATA31A5Q5VU36 1347 aa37.34■■■■□ 3.57
GFRA4-202ENST00000319242 SPATA31A7Q8IWB4 1347 aa37.34■■■■□ 3.57
GFRA4-202ENST00000319242 ONECUT3O60422 494 aaPredicted RBP37.33■■■■□ 3.57
GFRA4-202ENST00000319242 HSPA5P11021 654 aaKnown RBP37.33■■■■□ 3.57
GFRA4-202ENST00000319242 EVA1CP58658 441 aa37.33■■■■□ 3.57
GFRA4-202ENST00000319242 CAMTA1Q9Y6Y1 1673 aa37.33■■■■□ 3.57
GFRA4-202ENST00000319242 ANKRD36BQ8N2N9 1353 aa37.32■■■■□ 3.57
GFRA4-202ENST00000319242 SOX12O15370 315 aa37.32■■■■□ 3.56
GFRA4-202ENST00000319242 SEPT12Q8IYM1 358 aa37.31■■■■□ 3.56
GFRA4-202ENST00000319242 LMO7Q8WWI1 1683 aa37.31■■■■□ 3.56
GFRA4-202ENST00000319242 AATKQ6ZMQ8 1374 aa37.29■■■■□ 3.56
GFRA4-202ENST00000319242 FAM98CQ17RN3 349 aaKnown RBP37.28■■■■□ 3.56
GFRA4-202ENST00000319242 ARHGEF25Q86VW2 580 aa37.28■■■■□ 3.56
GFRA4-202ENST00000319242 SPATA31A1Q5TZJ5 1347 aa37.26■■■■□ 3.56
GFRA4-202ENST00000319242 LARP1Q6PKG0 1096 aaKnown RBP37.24■■■■□ 3.55
GFRA4-202ENST00000319242 A0A0G2JS52 829 aa37.23■■■■□ 3.55
GFRA4-202ENST00000319242 NFAT5O94916 1531 aa37.23■■■■□ 3.55
GFRA4-202ENST00000319242 MYT1Q01538 1121 aa37.23■■■■□ 3.55
GFRA4-202ENST00000319242 USP54Q70EL1 1684 aa37.23■■■■□ 3.55
GFRA4-202ENST00000319242 COL5A2P05997 1499 aaPredicted RBP37.21■■■■□ 3.55
GFRA4-202ENST00000319242 USP35Q9P2H5 1018 aa37.2■■■■□ 3.55
GFRA4-202ENST00000319242 AXIN2Q9Y2T1 843 aa37.2■■■■□ 3.55
GFRA4-202ENST00000319242 OVOS2A0A0J9YW53 1432 aa37.19■■■■□ 3.54
GFRA4-202ENST00000319242 OVOS2Q6IE36 1432 aa37.19■■■■□ 3.54
GFRA4-202ENST00000319242 COL18A1P39060 1754 aa37.19■■■■□ 3.54
GFRA4-202ENST00000319242 POLR3GLQ9BT43 218 aa37.19■■■■□ 3.54
Retrieved 100 of 20,778 RNA–protein pairs in 439.8 ms