RNA–Protein interactions for RNA: ENST00000318801.8

SYNGR1-202, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,361 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-202ENST00000318801 TRPC5Q9UL62 973 aaPredicted RBP41.25■■■■■ 4.19
SYNGR1-202ENST00000318801 RBM6P78332 1123 aaKnown RBP41.25■■■■■ 4.19
SYNGR1-202ENST00000318801 CABP1Q9NZU7 370 aa41.23■■■■■ 4.19
SYNGR1-202ENST00000318801 SBNO2Q9Y2G9 1366 aa41.2■■■■■ 4.19
SYNGR1-202ENST00000318801 SLC24A1O60721 1099 aa41.2■■■■■ 4.19
SYNGR1-202ENST00000318801 ALS2Q96Q42 1657 aa41.19■■■■■ 4.18
SYNGR1-202ENST00000318801 BRD4O60885 1362 aaPredicted RBP41.15■■■■■ 4.18
SYNGR1-202ENST00000318801 ATAD2Q6PL18 1390 aa41.15■■■■■ 4.18
SYNGR1-202ENST00000318801 ABTB2Q8N961 1025 aa41.14■■■■■ 4.18
SYNGR1-202ENST00000318801 CDK12Q9NYV4 1490 aaPredicted RBP41.14■■■■■ 4.18
SYNGR1-202ENST00000318801 UNC5CLQ8IV45 518 aa41.12■■■■■ 4.17
SYNGR1-202ENST00000318801 ZNF692Q9BU19 519 aaPredicted RBP41.12■■■■■ 4.17
SYNGR1-202ENST00000318801 BCL9LQ86UU0 1499 aa41.1■■■■■ 4.17
SYNGR1-202ENST00000318801 ABCA3Q99758 1704 aa41.08■■■■■ 4.17
SYNGR1-202ENST00000318801 ATRNO75882 1429 aa41.06■■■■■ 4.16
SYNGR1-202ENST00000318801 NUTM2GQ5VZR2 741 aa41.06■■■■■ 4.16
SYNGR1-202ENST00000318801 NLRP13Q86W25 1043 aa41.06■■■■■ 4.16
SYNGR1-202ENST00000318801 SLIT2O94813 1529 aa41.06■■■■■ 4.16
SYNGR1-202ENST00000318801 ST20-MTHFSA0A0A6YYL1 179 aa41.05■■■■■ 4.16
SYNGR1-202ENST00000318801 FAM83GA6ND36 823 aa41.05■■■■■ 4.16
SYNGR1-202ENST00000318801 GJD4Q96KN9 370 aaPredicted RBP41.02■■■■■ 4.16
SYNGR1-202ENST00000318801 USP6P35125 1406 aa41.02■■■■■ 4.16
SYNGR1-202ENST00000318801 PUS7Q96PZ0 661 aaKnown RBP41.01■■■■■ 4.16
SYNGR1-202ENST00000318801 PRDM11Q9NQV5 511 aa41■■■■■ 4.15
SYNGR1-202ENST00000318801 TNKS1BP1Q9C0C2 1729 aaKnown RBP41■■■■■ 4.15
SYNGR1-202ENST00000318801 TMC1Q8TDI8 760 aa40.99■■■■■ 4.15
SYNGR1-202ENST00000318801 NWD2Q9ULI1 1742 aa40.98■■■■■ 4.15
SYNGR1-202ENST00000318801 CCDC9Q9Y3X0 531 aaKnown RBP40.98■■■■■ 4.15
SYNGR1-202ENST00000318801 BTG4Q9NY30 223 aa40.96■■■■■ 4.15
SYNGR1-202ENST00000318801 NLRP6P59044 892 aa40.95■■■■■ 4.15
SYNGR1-202ENST00000318801 USP47Q96K76 1375 aa40.95■■■■■ 4.15
SYNGR1-202ENST00000318801 VPS72Q15906 364 aa40.94■■■■■ 4.14
SYNGR1-202ENST00000318801 PLCH1Q4KWH8 1693 aa40.94■■■■■ 4.14
SYNGR1-202ENST00000318801 COL14A1Q05707 1796 aaKnown RBP40.94■■■■■ 4.14
SYNGR1-202ENST00000318801 TESK2Q96S53 571 aa40.93■■■■■ 4.14
SYNGR1-202ENST00000318801 RGS12O14924 1447 aa40.93■■■■■ 4.14
SYNGR1-202ENST00000318801 ZC3H6P61129 1189 aaKnown RBP40.92■■■■■ 4.14
SYNGR1-202ENST00000318801 HDGFL2Q7Z4V5 671 aaPredicted RBP40.92■■■■■ 4.14
SYNGR1-202ENST00000318801 KTN1Q86UP2 1357 aaKnown RBP40.92■■■■■ 4.14
SYNGR1-202ENST00000318801 CRYBG1Q9Y4K1 1723 aa40.92■■■■■ 4.14
SYNGR1-202ENST00000318801 TERF2IPQ9NYB0 399 aa40.9■■■■■ 4.14
SYNGR1-202ENST00000318801 KIAA0232Q92628 1395 aa40.89■■■■■ 4.14
SYNGR1-202ENST00000318801 TTC21AQ8NDW8 1320 aa40.89■■■■■ 4.14
SYNGR1-202ENST00000318801 TMF1P82094 1093 aa40.89■■■■■ 4.14
SYNGR1-202ENST00000318801 USP19O94966 1318 aa40.88■■■■■ 4.14
SYNGR1-202ENST00000318801 CPSF1Q10570 1443 aaKnown RBP40.88■■■■■ 4.13
SYNGR1-202ENST00000318801 TTC21BQ7Z4L5 1316 aa40.88■■■■■ 4.13
SYNGR1-202ENST00000318801 GCP02774 474 aa40.87■■■■■ 4.13
SYNGR1-202ENST00000318801 PHRF1Q9P1Y6 1649 aaKnown RBP40.87■■■■■ 4.13
SYNGR1-202ENST00000318801 AKAP12Q02952 1782 aa40.86■■■■■ 4.13
SYNGR1-202ENST00000318801 SSH2Q76I76 1423 aa40.85■■■■■ 4.13
SYNGR1-202ENST00000318801 CDCA8Q53HL2 280 aa40.85■■■■■ 4.13
SYNGR1-202ENST00000318801 SLC12A5Q9H2X9 1139 aa40.85■■■■■ 4.13
SYNGR1-202ENST00000318801 CHRNA2Q15822 529 aa40.83■■■■■ 4.13
SYNGR1-202ENST00000318801 NINLQ9Y2I6 1382 aa40.83■■■■■ 4.13
SYNGR1-202ENST00000318801 EVA1CP58658 441 aa40.8■■■■■ 4.12
SYNGR1-202ENST00000318801 CPDO75976 1380 aa40.8■■■■■ 4.12
SYNGR1-202ENST00000318801 KCNH5Q8NCM2 988 aa40.78■■■■■ 4.12
SYNGR1-202ENST00000318801 SUGP2Q8IX01 1082 aaKnown RBP eCLIP40.76■■■■■ 4.12
SYNGR1-202ENST00000318801 UPF1Q92900 1129 aaKnown RBP eCLIP40.76■■■■■ 4.12
SYNGR1-202ENST00000318801 GLI3P10071 1580 aa40.75■■■■■ 4.11
SYNGR1-202ENST00000318801 NRKQ7Z2Y5 1582 aa40.75■■■■■ 4.11
SYNGR1-202ENST00000318801 STRN4Q9NRL3 753 aa40.74■■■■■ 4.11
SYNGR1-202ENST00000318801 MON2Q7Z3U7 1717 aa40.73■■■■■ 4.11
SYNGR1-202ENST00000318801 NRAPQ86VF7 1730 aa40.73■■■■■ 4.11
SYNGR1-202ENST00000318801 PIK3C2AO00443 1686 aa40.73■■■■■ 4.11
SYNGR1-202ENST00000318801 A0A0G2JS52 829 aa40.73■■■■■ 4.11
SYNGR1-202ENST00000318801 MYT1Q01538 1121 aa40.73■■■■■ 4.11
SYNGR1-202ENST00000318801 ZBTB7CA1YPR0 619 aa40.72■■■■■ 4.11
SYNGR1-202ENST00000318801 ONECUT3O60422 494 aaPredicted RBP40.72■■■■■ 4.11
SYNGR1-202ENST00000318801 SEPT12Q8IYM1 358 aa40.71■■■■■ 4.11
SYNGR1-202ENST00000318801 SPATA31A5Q5VU36 1347 aa40.7■■■■■ 4.11
SYNGR1-202ENST00000318801 SPATA31A7Q8IWB4 1347 aa40.7■■■■■ 4.11
SYNGR1-202ENST00000318801 EDC4Q6P2E9 1401 aaKnown RBP40.7■■■■■ 4.11
SYNGR1-202ENST00000318801 CD163L1Q9NR16 1453 aa40.69■■■■■ 4.1
SYNGR1-202ENST00000318801 A0A1W2PP64 1363 aa40.67■■■■■ 4.1
SYNGR1-202ENST00000318801 SLIT3O75094 1523 aa40.67■■■■■ 4.1
SYNGR1-202ENST00000318801 FAM98CQ17RN3 349 aaKnown RBP40.66■■■■■ 4.1
SYNGR1-202ENST00000318801 EIF4G2P78344 907 aaKnown RBP eCLIP40.65■■■■■ 4.1
SYNGR1-202ENST00000318801 SOX12O15370 315 aa40.63■■■■■ 4.1
SYNGR1-202ENST00000318801 AATKQ6ZMQ8 1374 aa40.62■■■■■ 4.09
SYNGR1-202ENST00000318801 NME9Q86XW9 330 aa40.61■■■■■ 4.09
SYNGR1-202ENST00000318801 USP31Q70CQ4 1352 aa40.61■■■■■ 4.09
SYNGR1-202ENST00000318801 SPATA31A1Q5TZJ5 1347 aa40.6■■■■■ 4.09
SYNGR1-202ENST00000318801 CAMTA1Q9Y6Y1 1673 aa40.59■■■■■ 4.09
SYNGR1-202ENST00000318801 KRT27Q7Z3Y8 459 aa40.58■■■■■ 4.09
SYNGR1-202ENST00000318801 ARHGEF25Q86VW2 580 aa40.58■■■■■ 4.09
SYNGR1-202ENST00000318801 ANKRD36BQ8N2N9 1353 aa40.58■■■■■ 4.09
SYNGR1-202ENST00000318801 USP35Q9P2H5 1018 aa40.57■■■■■ 4.08
SYNGR1-202ENST00000318801 CCDC125Q86Z20 511 aa40.56■■■■■ 4.08
SYNGR1-202ENST00000318801 LMO7Q8WWI1 1683 aa40.55■■■■■ 4.08
SYNGR1-202ENST00000318801 LARP1Q6PKG0 1096 aaKnown RBP40.54■■■■■ 4.08
SYNGR1-202ENST00000318801 ZRANB1Q9UGI0 708 aa40.54■■■■■ 4.08
SYNGR1-202ENST00000318801 BRWD3Q6RI45 1802 aa40.52■■■■■ 4.08
SYNGR1-202ENST00000318801 TCP11L2Q8N4U5 519 aa40.5■■■■■ 4.07
SYNGR1-202ENST00000318801 COG3Q96JB2 828 aa40.5■■■■■ 4.07
SYNGR1-202ENST00000318801 THRAP3Q9Y2W1 955 aaKnown RBP40.5■■■■■ 4.07
SYNGR1-202ENST00000318801 HSPA5P11021 654 aaKnown RBP40.49■■■■■ 4.07
SYNGR1-202ENST00000318801 COL5A2P05997 1499 aaPredicted RBP40.49■■■■■ 4.07
SYNGR1-202ENST00000318801 BARGINQ6ZT62 677 aa40.48■■■■■ 4.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms