RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 ZNF692Q9BU19 519 aaPredicted RBP27.7■■■□□ 2.02
VEGFB-201ENST00000309422 HDGFL2Q7Z4V5 671 aaPredicted RBP27.69■■■□□ 2.02
VEGFB-201ENST00000309422 NGLY1Q96IV0 654 aa27.69■■■□□ 2.02
VEGFB-201ENST00000309422 TESK2Q96S53 571 aa27.69■■■□□ 2.02
VEGFB-201ENST00000309422 TRPM3Q9HCF6 1732 aaPredicted RBP27.68■■■□□ 2.02
VEGFB-201ENST00000309422 USP6P35125 1406 aa27.66■■■□□ 2.02
VEGFB-201ENST00000309422 ABTB2Q8N961 1025 aa27.66■■■□□ 2.02
VEGFB-201ENST00000309422 TERF2IPQ9NYB0 399 aa27.66■■■□□ 2.02
VEGFB-201ENST00000309422 AFF2P51816 1311 aa27.64■■■□□ 2.02
VEGFB-201ENST00000309422 KTN1Q86UP2 1357 aaKnown RBP27.64■■■□□ 2.01
VEGFB-201ENST00000309422 ALS2Q96Q42 1657 aa27.62■■■□□ 2.01
VEGFB-201ENST00000309422 NLRP13Q86W25 1043 aa27.6■■■□□ 2.01
VEGFB-201ENST00000309422 CABLES1Q8TDN4 633 aa27.6■■■□□ 2.01
VEGFB-201ENST00000309422 TTC21AQ8NDW8 1320 aa27.59■■■□□ 2.01
VEGFB-201ENST00000309422 HSPA5P11021 654 aaKnown RBP27.57■■■□□ 2
VEGFB-201ENST00000309422 NUTM2GQ5VZR2 741 aa27.57■■■□□ 2
VEGFB-201ENST00000309422 USP21Q9UK80 565 aa27.57■■■□□ 2
VEGFB-201ENST00000309422 CPSF1Q10570 1443 aaKnown RBP27.56■■■□□ 2
VEGFB-201ENST00000309422 POLR3GLQ9BT43 218 aa27.56■■■□□ 2
VEGFB-201ENST00000309422 SLC12A5Q9H2X9 1139 aa27.56■■■□□ 2
VEGFB-201ENST00000309422 RGS17Q9UGC6 210 aaPredicted RBP27.55■■■□□ 2
VEGFB-201ENST00000309422 NLRP6P59044 892 aa27.54■■■□□ 2
VEGFB-201ENST00000309422 TTC21BQ7Z4L5 1316 aa27.54■■■□□ 2
VEGFB-201ENST00000309422 ABCA3Q99758 1704 aa27.52■■■□□ 2
VEGFB-201ENST00000309422 A0A1W2PP64 1363 aa27.52■■■□□ 2
VEGFB-201ENST00000309422 AKAP12Q02952 1782 aa27.52■■■□□ 2
VEGFB-201ENST00000309422 PRDM11Q9NQV5 511 aa27.52■■■□□ 2
VEGFB-201ENST00000309422 EDC4Q6P2E9 1401 aaKnown RBP27.52■■■□□ 2
VEGFB-201ENST00000309422 FNBP4Q8N3X1 1017 aaPredicted RBP27.51■■□□□ 1.99
VEGFB-201ENST00000309422 TRPC5Q9UL62 973 aaPredicted RBP27.51■■□□□ 1.99
VEGFB-201ENST00000309422 ANKRD36BQ8N2N9 1353 aa27.51■■□□□ 1.99
VEGFB-201ENST00000309422 MARF1Q9Y4F3 1742 aaKnown RBP27.5■■□□□ 1.99
VEGFB-201ENST00000309422 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.5■■□□□ 1.99
VEGFB-201ENST00000309422 POTEAQ6S8J7 498 aa27.49■■□□□ 1.99
VEGFB-201ENST00000309422 SSH2Q76I76 1423 aa27.49■■□□□ 1.99
VEGFB-201ENST00000309422 RXRBP28702 533 aa27.48■■□□□ 1.99
VEGFB-201ENST00000309422 MON2Q7Z3U7 1717 aa27.48■■□□□ 1.99
VEGFB-201ENST00000309422 USP19O94966 1318 aa27.48■■□□□ 1.99
VEGFB-201ENST00000309422 QTRT2Q9H974 415 aaKnown RBP27.48■■□□□ 1.99
VEGFB-201ENST00000309422 NRKQ7Z2Y5 1582 aa27.47■■□□□ 1.99
VEGFB-201ENST00000309422 KCNH5Q8NCM2 988 aa27.47■■□□□ 1.99
VEGFB-201ENST00000309422 PHRF1Q9P1Y6 1649 aaKnown RBP27.47■■□□□ 1.99
VEGFB-201ENST00000309422 CD163L1Q9NR16 1453 aa27.46■■□□□ 1.99
VEGFB-201ENST00000309422 ILDR2Q71H61 639 aa27.46■■□□□ 1.99
VEGFB-201ENST00000309422 UNC5CLQ8IV45 518 aa27.46■■□□□ 1.99
VEGFB-201ENST00000309422 KIAA0232Q92628 1395 aa27.45■■□□□ 1.98
VEGFB-201ENST00000309422 ZC3H6P61129 1189 aaKnown RBP27.44■■□□□ 1.98
VEGFB-201ENST00000309422 RBM6P78332 1123 aaKnown RBP27.44■■□□□ 1.98
VEGFB-201ENST00000309422 CCDC9Q9Y3X0 531 aaKnown RBP27.44■■□□□ 1.98
VEGFB-201ENST00000309422 SLIT2O94813 1529 aa27.44■■□□□ 1.98
VEGFB-201ENST00000309422 PIK3C2AO00443 1686 aa27.43■■□□□ 1.98
VEGFB-201ENST00000309422 GCP02774 474 aa27.43■■□□□ 1.98
VEGFB-201ENST00000309422 COL14A1Q05707 1796 aaKnown RBP27.43■■□□□ 1.98
VEGFB-201ENST00000309422 ZBTB7CA1YPR0 619 aa27.42■■□□□ 1.98
VEGFB-201ENST00000309422 CRYBG1Q9Y4K1 1723 aa27.42■■□□□ 1.98
VEGFB-201ENST00000309422 BTG4Q9NY30 223 aa27.41■■□□□ 1.98
VEGFB-201ENST00000309422 FAM83GA6ND36 823 aa27.4■■□□□ 1.98
VEGFB-201ENST00000309422 BCL9LQ86UU0 1499 aa27.4■■□□□ 1.98
VEGFB-201ENST00000309422 CPDO75976 1380 aa27.39■■□□□ 1.98
VEGFB-201ENST00000309422 SOX12O15370 315 aa27.39■■□□□ 1.98
VEGFB-201ENST00000309422 SLIT3O75094 1523 aa27.39■■□□□ 1.98
VEGFB-201ENST00000309422 NWD2Q9ULI1 1742 aa27.39■■□□□ 1.97
VEGFB-201ENST00000309422 ATRNO75882 1429 aa27.39■■□□□ 1.97
VEGFB-201ENST00000309422 PLCH1Q4KWH8 1693 aa27.39■■□□□ 1.97
VEGFB-201ENST00000309422 NME9Q86XW9 330 aa27.38■■□□□ 1.97
VEGFB-201ENST00000309422 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.37■■□□□ 1.97
VEGFB-201ENST00000309422 COG3Q96JB2 828 aa27.37■■□□□ 1.97
VEGFB-201ENST00000309422 USP31Q70CQ4 1352 aa27.37■■□□□ 1.97
VEGFB-201ENST00000309422 CHRNA2Q15822 529 aa27.36■■□□□ 1.97
VEGFB-201ENST00000309422 CDK12Q9NYV4 1490 aaPredicted RBP27.36■■□□□ 1.97
VEGFB-201ENST00000309422 EVA1CP58658 441 aa27.35■■□□□ 1.97
VEGFB-201ENST00000309422 VPS72Q15906 364 aa27.34■■□□□ 1.97
VEGFB-201ENST00000309422 GJD4Q96KN9 370 aaPredicted RBP27.34■■□□□ 1.97
VEGFB-201ENST00000309422 NSD3Q9BZ95 1437 aa27.32■■□□□ 1.96
VEGFB-201ENST00000309422 STRN4Q9NRL3 753 aa27.32■■□□□ 1.96
VEGFB-201ENST00000309422 MYOM1P52179 1685 aa27.31■■□□□ 1.96
VEGFB-201ENST00000309422 A0A0G2JS52 829 aa27.3■■□□□ 1.96
VEGFB-201ENST00000309422 ZEB1P37275 1124 aaPredicted RBP27.3■■□□□ 1.96
VEGFB-201ENST00000309422 MYT1Q01538 1121 aa27.3■■□□□ 1.96
VEGFB-201ENST00000309422 OVOS2A0A0J9YW53 1432 aa27.3■■□□□ 1.96
VEGFB-201ENST00000309422 OVOS2Q6IE36 1432 aa27.3■■□□□ 1.96
VEGFB-201ENST00000309422 CGNL1Q0VF96 1302 aa27.29■■□□□ 1.96
VEGFB-201ENST00000309422 AATKQ6ZMQ8 1374 aa27.28■■□□□ 1.96
VEGFB-201ENST00000309422 SOCS7O14512 581 aa27.28■■□□□ 1.96
VEGFB-201ENST00000309422 USP54Q70EL1 1684 aa27.27■■□□□ 1.96
VEGFB-201ENST00000309422 ZRANB1Q9UGI0 708 aa27.26■■□□□ 1.95
VEGFB-201ENST00000309422 KIF7Q2M1P5 1343 aa27.26■■□□□ 1.95
VEGFB-201ENST00000309422 NRAPQ86VF7 1730 aa27.26■■□□□ 1.95
VEGFB-201ENST00000309422 RGS12O14924 1447 aa27.25■■□□□ 1.95
VEGFB-201ENST00000309422 ARHGEF25Q86VW2 580 aa27.24■■□□□ 1.95
VEGFB-201ENST00000309422 NFAT5O94916 1531 aa27.24■■□□□ 1.95
VEGFB-201ENST00000309422 ABCC6O95255 1503 aa27.23■■□□□ 1.95
VEGFB-201ENST00000309422 GGNBP2Q9H3C7 697 aa27.23■■□□□ 1.95
VEGFB-201ENST00000309422 CSB-PGBD3P0DP91 1061 aa27.22■■□□□ 1.95
VEGFB-201ENST00000309422 PANK3Q9H999 370 aa27.22■■□□□ 1.95
VEGFB-201ENST00000309422 FYB1O15117 783 aa27.21■■□□□ 1.95
VEGFB-201ENST00000309422 COL5A2P05997 1499 aaPredicted RBP27.2■■□□□ 1.95
VEGFB-201ENST00000309422 LMO7Q8WWI1 1683 aa27.2■■□□□ 1.95
VEGFB-201ENST00000309422 KNSTRNQ9Y448 316 aa27.2■■□□□ 1.94
VEGFB-201ENST00000309422 SPATA31A5Q5VU36 1347 aa27.2■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms