RNA–Protein interactions for RNA: ENST00000309246.9

TPT1-201, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 1 (best) BASIC

Gene TPT1, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-201ENST00000309246 COL14A1Q05707 1796 aaKnown RBP17.87■□□□□ 0.45
TPT1-201ENST00000309246 CCDC9Q9Y3X0 531 aaKnown RBP17.87■□□□□ 0.45
TPT1-201ENST00000309246 SEPT12Q8IYM1 358 aa17.86■□□□□ 0.45
TPT1-201ENST00000309246 ZRANB1Q9UGI0 708 aa17.86■□□□□ 0.45
TPT1-201ENST00000309246 GPRASP1Q5JY77 1395 aa17.86■□□□□ 0.45
TPT1-201ENST00000309246 BLMP54132 1417 aaPredicted RBP17.86■□□□□ 0.45
TPT1-201ENST00000309246 FAM83GA6ND36 823 aa17.85■□□□□ 0.45
TPT1-201ENST00000309246 WASLO00401 505 aaPredicted RBP17.85■□□□□ 0.45
TPT1-201ENST00000309246 EP400Q96L91 3159 aa17.83■□□□□ 0.44
TPT1-201ENST00000309246 ATP7BP35670 1465 aa17.82■□□□□ 0.44
TPT1-201ENST00000309246 KIAA1210Q9ULL0 1709 aa17.82■□□□□ 0.44
TPT1-201ENST00000309246 TOPAZ1Q8N9V7 1692 aa17.82■□□□□ 0.44
TPT1-201ENST00000309246 PHRF1Q9P1Y6 1649 aaKnown RBP17.82■□□□□ 0.44
TPT1-201ENST00000309246 NGDNQ8NEJ9 315 aaKnown RBP17.81■□□□□ 0.44
TPT1-201ENST00000309246 STAC3Q96MF2 364 aa17.81■□□□□ 0.44
TPT1-201ENST00000309246 A0A0G2JS52 829 aa17.8■□□□□ 0.44
TPT1-201ENST00000309246 ONECUT3O60422 494 aaPredicted RBP17.8■□□□□ 0.44
TPT1-201ENST00000309246 HRCP23327 699 aa17.8■□□□□ 0.44
TPT1-201ENST00000309246 MYT1Q01538 1121 aa17.8■□□□□ 0.44
TPT1-201ENST00000309246 KRT27Q7Z3Y8 459 aa17.8■□□□□ 0.44
TPT1-201ENST00000309246 DEFB132Q7Z7B7 95 aa17.8■□□□□ 0.44
TPT1-201ENST00000309246 BTG4Q9NY30 223 aa17.8■□□□□ 0.44
TPT1-201ENST00000309246 PAK3O75914 559 aaPredicted RBP17.79■□□□□ 0.44
TPT1-201ENST00000309246 SF3B2Q13435 895 aaKnown RBP17.78■□□□□ 0.44
TPT1-201ENST00000309246 FAM98CQ17RN3 349 aaKnown RBP17.78■□□□□ 0.44
TPT1-201ENST00000309246 NUDT16Q96DE0 195 aaKnown RBP17.77■□□□□ 0.44
TPT1-201ENST00000309246 RGPD1P0DJD0 1748 aa17.76■□□□□ 0.43
TPT1-201ENST00000309246 THSD7AQ9UPZ6 1657 aa17.76■□□□□ 0.43
TPT1-201ENST00000309246 PRDM11Q9NQV5 511 aa17.75■□□□□ 0.43
TPT1-201ENST00000309246 CDK19Q9BWU1 502 aa17.73■□□□□ 0.43
TPT1-201ENST00000309246 SPATA31A5Q5VU36 1347 aa17.72■□□□□ 0.43
TPT1-201ENST00000309246 SPATA31A7Q8IWB4 1347 aa17.72■□□□□ 0.43
TPT1-201ENST00000309246 TNS1Q9HBL0 1735 aaKnown RBP17.72■□□□□ 0.43
TPT1-201ENST00000309246 KIAA0232Q92628 1395 aa17.72■□□□□ 0.43
TPT1-201ENST00000309246 QRICH2Q9H0J4 1663 aa17.71■□□□□ 0.43
TPT1-201ENST00000309246 NRKQ7Z2Y5 1582 aa17.71■□□□□ 0.43
TPT1-201ENST00000309246 POLR3AO14802 1390 aaPredicted RBP17.71■□□□□ 0.43
TPT1-201ENST00000309246 CHRNA2Q15822 529 aa17.71■□□□□ 0.43
TPT1-201ENST00000309246 NUTM2GQ5VZR2 741 aa17.71■□□□□ 0.43
TPT1-201ENST00000309246 FAM182BQ5T319 152 aa17.7■□□□□ 0.42
TPT1-201ENST00000309246 ACEP12821 1306 aa17.7■□□□□ 0.42
TPT1-201ENST00000309246 BAG6P46379 1132 aa17.69■□□□□ 0.42
TPT1-201ENST00000309246 NBPF1Q3BBV0 1214 aa17.69■□□□□ 0.42
TPT1-201ENST00000309246 LRP5O75197 1615 aa17.69■□□□□ 0.42
TPT1-201ENST00000309246 ZC3H6P61129 1189 aaKnown RBP17.68■□□□□ 0.42
TPT1-201ENST00000309246 STRN4Q9NRL3 753 aa17.68■□□□□ 0.42
TPT1-201ENST00000309246 CCDC61Q9Y6R9 512 aa17.68■□□□□ 0.42
TPT1-201ENST00000309246 NBPF8Q3BBV2 869 aa17.67■□□□□ 0.42
TPT1-201ENST00000309246 LMO7Q8WWI1 1683 aa17.67■□□□□ 0.42
TPT1-201ENST00000309246 SPATA31A1Q5TZJ5 1347 aa17.66■□□□□ 0.42
TPT1-201ENST00000309246 PLEKHG3A1L390 1219 aa17.65■□□□□ 0.42
TPT1-201ENST00000309246 CAMTA1Q9Y6Y1 1673 aa17.64■□□□□ 0.42
TPT1-201ENST00000309246 PPIP5K1Q6PFW1 1433 aa17.64■□□□□ 0.42
TPT1-201ENST00000309246 PSDA5PKW4 1024 aaPredicted RBP17.64■□□□□ 0.41
TPT1-201ENST00000309246 SRPK2P78362 688 aaKnown RBP17.64■□□□□ 0.41
TPT1-201ENST00000309246 EN1Q05925 392 aaPredicted RBP17.64■□□□□ 0.41
TPT1-201ENST00000309246 CENPJQ9HC77 1338 aaPredicted RBP17.64■□□□□ 0.41
TPT1-201ENST00000309246 SSH2Q76I76 1423 aa17.64■□□□□ 0.41
TPT1-201ENST00000309246 ABTB2Q8N961 1025 aa17.63■□□□□ 0.41
TPT1-201ENST00000309246 TRPM1Q7Z4N2 1603 aa17.62■□□□□ 0.41
TPT1-201ENST00000309246 CABP2Q9NPB3 220 aa17.62■□□□□ 0.41
TPT1-201ENST00000309246 USP35Q9P2H5 1018 aa17.62■□□□□ 0.41
TPT1-201ENST00000309246 USP19O94966 1318 aa17.62■□□□□ 0.41
TPT1-201ENST00000309246 DISP2A7MBM2 1401 aa17.61■□□□□ 0.41
TPT1-201ENST00000309246 EVA1CP58658 441 aa17.6■□□□□ 0.41
TPT1-201ENST00000309246 CPDO75976 1380 aa17.6■□□□□ 0.41
TPT1-201ENST00000309246 PARP4Q9UKK3 1724 aaKnown RBP17.58■□□□□ 0.41
TPT1-201ENST00000309246 PIK3C2AO00443 1686 aa17.58■□□□□ 0.41
TPT1-201ENST00000309246 LARP1Q6PKG0 1096 aaKnown RBP17.58■□□□□ 0.4
TPT1-201ENST00000309246 NLRP13Q86W25 1043 aa17.58■□□□□ 0.4
TPT1-201ENST00000309246 RREB1Q92766 1687 aa17.58■□□□□ 0.4
TPT1-201ENST00000309246 USP6P35125 1406 aa17.57■□□□□ 0.4
TPT1-201ENST00000309246 TRIM37O94972 964 aa17.57■□□□□ 0.4
TPT1-201ENST00000309246 EZH2Q15910 746 aaKnown RBP17.57■□□□□ 0.4
TPT1-201ENST00000309246 FAM196AQ6ZSG2 479 aa17.57■□□□□ 0.4
TPT1-201ENST00000309246 BARGINQ6ZT62 677 aa17.57■□□□□ 0.4
TPT1-201ENST00000309246 L3MBTL2Q969R5 705 aa17.57■□□□□ 0.4
TPT1-201ENST00000309246 AKAP12Q02952 1782 aa17.57■□□□□ 0.4
TPT1-201ENST00000309246 COL5A2P05997 1499 aaPredicted RBP17.56■□□□□ 0.4
TPT1-201ENST00000309246 NUP188Q5SRE5 1749 aa17.56■□□□□ 0.4
TPT1-201ENST00000309246 GCP02774 474 aa17.56■□□□□ 0.4
TPT1-201ENST00000309246 SLIT3O75094 1523 aa17.56■□□□□ 0.4
TPT1-201ENST00000309246 WNK3Q9BYP7 1800 aa17.56■□□□□ 0.4
TPT1-201ENST00000309246 BRD4O60885 1362 aaPredicted RBP17.55■□□□□ 0.4
TPT1-201ENST00000309246 R3HDM1Q15032 1099 aaKnown RBP17.55■□□□□ 0.4
TPT1-201ENST00000309246 CABP1Q9NZU7 370 aa17.55■□□□□ 0.4
TPT1-201ENST00000309246 SRCAPQ6ZRS2 3230 aa17.55■□□□□ 0.4
TPT1-201ENST00000309246 COL18A1P39060 1754 aa17.55■□□□□ 0.4
TPT1-201ENST00000309246 RGPD5Q99666 1765 aa17.55■□□□□ 0.4
TPT1-201ENST00000309246 ZBTB7CA1YPR0 619 aa17.54■□□□□ 0.4
TPT1-201ENST00000309246 PDE3BQ13370 1112 aa17.54■□□□□ 0.4
TPT1-201ENST00000309246 TCP11L2Q8N4U5 519 aa17.54■□□□□ 0.4
TPT1-201ENST00000309246 SIN3AQ96ST3 1273 aa17.54■□□□□ 0.4
TPT1-201ENST00000309246 CAMKK2Q96RR4 588 aa17.53■□□□□ 0.4
TPT1-201ENST00000309246 SBF2Q86WG5 1849 aa17.53■□□□□ 0.4
TPT1-201ENST00000309246 LRRC37A3O60309 1634 aa17.53■□□□□ 0.4
TPT1-201ENST00000309246 APBA3O96018 575 aa17.52■□□□□ 0.4
TPT1-201ENST00000309246 NLRP6P59044 892 aa17.52■□□□□ 0.4
TPT1-201ENST00000309246 EVC2Q86UK5 1308 aa17.51■□□□□ 0.39
TPT1-201ENST00000309246 CRB1P82279 1406 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms