RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 ANO8Q9HCE9 1232 aaPredicted RBP13.1□□□□□ -0.31
SYNPO2-201ENST00000307142 MCTP1Q6DN14 999 aa13.09□□□□□ -0.31
SYNPO2-201ENST00000307142 CPLX2Q6PUV4 134 aaKnown RBP13.09□□□□□ -0.31
SYNPO2-201ENST00000307142 ZPR1O75312 459 aa13.09□□□□□ -0.31
SYNPO2-201ENST00000307142 TMOD3Q9NYL9 352 aa13.09□□□□□ -0.31
SYNPO2-201ENST00000307142 TNRQ92752 1358 aa13.09□□□□□ -0.31
SYNPO2-201ENST00000307142 ERC2O15083 957 aa13.08□□□□□ -0.31
SYNPO2-201ENST00000307142 KRT28Q7Z3Y7 464 aa13.08□□□□□ -0.31
SYNPO2-201ENST00000307142 PDE4CQ08493 712 aa13.08□□□□□ -0.32
SYNPO2-201ENST00000307142 SLC4A3P48751 1232 aa13.08□□□□□ -0.32
SYNPO2-201ENST00000307142 TSPOAP1O95153 1857 aa13.08□□□□□ -0.32
SYNPO2-201ENST00000307142 HDGFL1Q5TGJ6 251 aa13.08□□□□□ -0.32
SYNPO2-201ENST00000307142 CHMP4CQ96CF2 233 aa13.08□□□□□ -0.32
SYNPO2-201ENST00000307142 ERICH6BQ5W0A0 696 aa13.08□□□□□ -0.32
SYNPO2-201ENST00000307142 PNISRQ8TF01 805 aaKnown RBP13.08□□□□□ -0.32
SYNPO2-201ENST00000307142 PHF8Q9UPP1 1060 aa13.07□□□□□ -0.32
SYNPO2-201ENST00000307142 EIF4G3O43432 1585 aaKnown RBP13.07□□□□□ -0.32
SYNPO2-201ENST00000307142 CCDC43Q96MW1 224 aaKnown RBP13.07□□□□□ -0.32
SYNPO2-201ENST00000307142 TBC1D2BQ9UPU7 963 aa13.07□□□□□ -0.32
SYNPO2-201ENST00000307142 STARD3NLO95772 234 aa13.07□□□□□ -0.32
SYNPO2-201ENST00000307142 ZKSCAN1P17029 563 aaPredicted RBP13.07□□□□□ -0.32
SYNPO2-201ENST00000307142 IDI1Q13907 227 aa13.07□□□□□ -0.32
SYNPO2-201ENST00000307142 GNL3LQ9NVN8 582 aaKnown RBP13.07□□□□□ -0.32
SYNPO2-201ENST00000307142 PES1O00541 588 aaKnown RBP13.07□□□□□ -0.32
SYNPO2-201ENST00000307142 PPP2R1AP30153 589 aa13.07□□□□□ -0.32
SYNPO2-201ENST00000307142 SYAP1Q96A49 352 aaPredicted RBP13.07□□□□□ -0.32
SYNPO2-201ENST00000307142 THOC2Q8NI27 1593 aaKnown RBP13.07□□□□□ -0.32
SYNPO2-201ENST00000307142 CNKSR2Q8WXI2 1034 aa13.06□□□□□ -0.32
SYNPO2-201ENST00000307142 CPLX1O14810 134 aa13.06□□□□□ -0.32
SYNPO2-201ENST00000307142 RRP1P56182 461 aaKnown RBP13.06□□□□□ -0.32
SYNPO2-201ENST00000307142 TTC39AQ5SRH9 613 aa13.06□□□□□ -0.32
SYNPO2-201ENST00000307142 MPRIPQ6WCQ1 1025 aa13.06□□□□□ -0.32
SYNPO2-201ENST00000307142 MPHOSPH8Q99549 860 aa13.06□□□□□ -0.32
SYNPO2-201ENST00000307142 ADAMTS8Q9UP79 889 aa13.06□□□□□ -0.32
SYNPO2-201ENST00000307142 CENPQQ7L2Z9 268 aaPredicted RBP13.05□□□□□ -0.32
SYNPO2-201ENST00000307142 TCP11L2Q8N4U5 519 aa13.05□□□□□ -0.32
SYNPO2-201ENST00000307142 TPD52L1Q16890 204 aaPredicted RBP13.05□□□□□ -0.32
SYNPO2-201ENST00000307142 CADPS2Q86UW7 1296 aa13.05□□□□□ -0.32
SYNPO2-201ENST00000307142 PTMSP20962 102 aa13.05□□□□□ -0.32
SYNPO2-201ENST00000307142 RNF20Q5VTR2 975 aa13.05□□□□□ -0.32
SYNPO2-201ENST00000307142 WDR7Q9Y4E6 1490 aa13.05□□□□□ -0.32
SYNPO2-201ENST00000307142 DNAJC2Q99543 621 aaKnown RBP13.05□□□□□ -0.32
SYNPO2-201ENST00000307142 PTCD1O75127 700 aaKnown RBP13.05□□□□□ -0.32
SYNPO2-201ENST00000307142 USHBP1Q8N6Y0 703 aa13.04□□□□□ -0.32
SYNPO2-201ENST00000307142 TWISTNBQ3B726 338 aaPredicted RBP13.04□□□□□ -0.32
SYNPO2-201ENST00000307142 C8orf37Q96NL8 207 aa13.04□□□□□ -0.32
SYNPO2-201ENST00000307142 EXOC5O00471 708 aa13.04□□□□□ -0.32
SYNPO2-201ENST00000307142 ATP2B2Q01814 1243 aa13.04□□□□□ -0.32
SYNPO2-201ENST00000307142 ZNF652Q9Y2D9 606 aa13.03□□□□□ -0.32
SYNPO2-201ENST00000307142 ZBED9Q6R2W3 1325 aa13.03□□□□□ -0.32
SYNPO2-201ENST00000307142 RALYLQ86SE5 291 aaKnown RBP13.03□□□□□ -0.32
SYNPO2-201ENST00000307142 SLC4A2P04920 1241 aa13.03□□□□□ -0.32
SYNPO2-201ENST00000307142 FOXD4L6Q3SYB3 417 aaPredicted RBP13.03□□□□□ -0.32
SYNPO2-201ENST00000307142 FOXD4L3Q6VB84 417 aaPredicted RBP13.03□□□□□ -0.32
SYNPO2-201ENST00000307142 GNAT3A8MTJ3 354 aa13.03□□□□□ -0.32
SYNPO2-201ENST00000307142 HSPA2P54652 639 aa13.03□□□□□ -0.32
SYNPO2-201ENST00000307142 CCDC57Q2TAC2 916 aa13.03□□□□□ -0.32
SYNPO2-201ENST00000307142 GZF1Q9H116 711 aaPredicted RBP13.03□□□□□ -0.32
SYNPO2-201ENST00000307142 FAM161AQ3B820 660 aa13.03□□□□□ -0.32
SYNPO2-201ENST00000307142 NSD3Q9BZ95 1437 aa13.02□□□□□ -0.32
SYNPO2-201ENST00000307142 CCDC158Q5M9N0 1113 aa13.02□□□□□ -0.33
SYNPO2-201ENST00000307142 NOC3LQ8WTT2 800 aaKnown RBP13.02□□□□□ -0.33
SYNPO2-201ENST00000307142 EXOC6Q8TAG9 804 aa13.02□□□□□ -0.33
SYNPO2-201ENST00000307142 NCKAP5LQ9HCH0 1330 aa13.02□□□□□ -0.33
SYNPO2-201ENST00000307142 SLC3A2P08195 630 aaKnown RBP13.02□□□□□ -0.33
SYNPO2-201ENST00000307142 SURF6O75683 361 aaKnown RBP13.01□□□□□ -0.33
SYNPO2-201ENST00000307142 WWC1Q8IX03 1113 aa13.01□□□□□ -0.33
SYNPO2-201ENST00000307142 SIL1Q9H173 461 aa13.01□□□□□ -0.33
SYNPO2-201ENST00000307142 ABCC5O15440 1437 aa13.01□□□□□ -0.33
SYNPO2-201ENST00000307142 KDM5BQ9UGL1 1544 aa13.01□□□□□ -0.33
SYNPO2-201ENST00000307142 REC8O95072 547 aa13.01□□□□□ -0.33
SYNPO2-201ENST00000307142 FOSBP53539 338 aa13.01□□□□□ -0.33
SYNPO2-201ENST00000307142 NINLQ9Y2I6 1382 aa13.01□□□□□ -0.33
SYNPO2-201ENST00000307142 GNAI3P08754 354 aa13.01□□□□□ -0.33
SYNPO2-201ENST00000307142 KRI1Q8N9T8 703 aaKnown RBP13.01□□□□□ -0.33
SYNPO2-201ENST00000307142 WASLO00401 505 aaPredicted RBP13□□□□□ -0.33
SYNPO2-201ENST00000307142 CEP89Q96ST8 783 aa13□□□□□ -0.33
SYNPO2-201ENST00000307142 BCL11BQ9C0K0 894 aaPredicted RBP13□□□□□ -0.33
SYNPO2-201ENST00000307142 LMTK3Q96Q04 1460 aa13□□□□□ -0.33
SYNPO2-201ENST00000307142 CLASRPQ8N2M8 674 aaKnown RBP13□□□□□ -0.33
SYNPO2-201ENST00000307142 PANK1Q8TE04 598 aa13□□□□□ -0.33
SYNPO2-201ENST00000307142 FSD1Q9BTV5 496 aa13□□□□□ -0.33
SYNPO2-201ENST00000307142 PHF14O94880 888 aa13□□□□□ -0.33
SYNPO2-201ENST00000307142 STK11IPQ8N1F8 1099 aa13□□□□□ -0.33
SYNPO2-201ENST00000307142 KDM4AO75164 1064 aa12.99□□□□□ -0.33
SYNPO2-201ENST00000307142 ZSCAN29Q8IWY8 852 aaPredicted RBP12.99□□□□□ -0.33
SYNPO2-201ENST00000307142 CNTROBQ8N137 903 aa12.99□□□□□ -0.33
SYNPO2-201ENST00000307142 ADAMTS12P58397 1594 aa12.99□□□□□ -0.33
SYNPO2-201ENST00000307142 NOS1P29475 1434 aa12.99□□□□□ -0.33
SYNPO2-201ENST00000307142 EXOSC9Q06265 439 aaKnown RBP12.99□□□□□ -0.33
SYNPO2-201ENST00000307142 ZNF518AQ6AHZ1 1483 aa12.99□□□□□ -0.33
SYNPO2-201ENST00000307142 NBPF8Q3BBV2 869 aa12.99□□□□□ -0.33
SYNPO2-201ENST00000307142 LNPKQ9C0E8 428 aa12.99□□□□□ -0.33
SYNPO2-201ENST00000307142 RRP12Q5JTH9 1297 aaKnown RBP12.99□□□□□ -0.33
SYNPO2-201ENST00000307142 TSR2Q969E8 191 aaKnown RBP12.99□□□□□ -0.33
SYNPO2-201ENST00000307142 BRD4O60885 1362 aaPredicted RBP12.98□□□□□ -0.33
SYNPO2-201ENST00000307142 PAXIP1Q6ZW49 1069 aaPredicted RBP12.98□□□□□ -0.33
SYNPO2-201ENST00000307142 AK7Q96M32 723 aa12.98□□□□□ -0.33
SYNPO2-201ENST00000307142 GNAI2P04899 355 aa12.98□□□□□ -0.33
SYNPO2-201ENST00000307142 MSNP26038 577 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms