RNA–Protein interactions for RNA: ENST00000306324.3

HOXD4-201, Transcript of homeobox D4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD4, Length 1,464 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4-201ENST00000306324 ALS2Q96Q42 1657 aa31■■■□□ 2.55
HOXD4-201ENST00000306324 KIF7Q2M1P5 1343 aa30.99■■■□□ 2.55
HOXD4-201ENST00000306324 A0A1W2PP64 1363 aa30.99■■■□□ 2.55
HOXD4-201ENST00000306324 PNPLA6Q8IY17 1366 aa30.99■■■□□ 2.55
HOXD4-201ENST00000306324 NRKQ7Z2Y5 1582 aa30.97■■■□□ 2.55
HOXD4-201ENST00000306324 ANKRD36BQ8N2N9 1353 aa30.96■■■□□ 2.55
HOXD4-201ENST00000306324 COL22A1Q8NFW1 1626 aaPredicted RBP30.95■■■□□ 2.54
HOXD4-201ENST00000306324 ARHGEF10O15013 1369 aa30.94■■■□□ 2.54
HOXD4-201ENST00000306324 BRD4O60885 1362 aaPredicted RBP30.94■■■□□ 2.54
HOXD4-201ENST00000306324 CCDC7Q96M83 1385 aa30.92■■■□□ 2.54
HOXD4-201ENST00000306324 PLEKHG5O94827 1062 aa30.92■■■□□ 2.54
HOXD4-201ENST00000306324 WASHC2AQ641Q2 1341 aa30.92■■■□□ 2.54
HOXD4-201ENST00000306324 SSH2Q76I76 1423 aa30.91■■■□□ 2.54
HOXD4-201ENST00000306324 ABTB2Q8N961 1025 aa30.9■■■□□ 2.54
HOXD4-201ENST00000306324 TTC21BQ7Z4L5 1316 aa30.9■■■□□ 2.54
HOXD4-201ENST00000306324 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.89■■■□□ 2.54
HOXD4-201ENST00000306324 SPATA31A6Q5VVP1 1343 aa30.89■■■□□ 2.54
HOXD4-201ENST00000306324 EDC4Q6P2E9 1401 aaKnown RBP30.89■■■□□ 2.54
HOXD4-201ENST00000306324 PIK3C2AO00443 1686 aa30.89■■■□□ 2.53
HOXD4-201ENST00000306324 NUTM2BA6NNL0 878 aaPredicted RBP30.89■■■□□ 2.53
HOXD4-201ENST00000306324 NUTM2EB1AL46 878 aaPredicted RBP30.89■■■□□ 2.53
HOXD4-201ENST00000306324 NUTM2GQ5VZR2 741 aa30.89■■■□□ 2.53
HOXD4-201ENST00000306324 NUTM2AQ8IVF1 878 aaPredicted RBP30.89■■■□□ 2.53
HOXD4-201ENST00000306324 TTC21AQ8NDW8 1320 aa30.87■■■□□ 2.53
HOXD4-201ENST00000306324 ABCA3Q99758 1704 aa30.87■■■□□ 2.53
HOXD4-201ENST00000306324 CABLES1Q8TDN4 633 aa30.84■■■□□ 2.53
HOXD4-201ENST00000306324 CRYBG1Q9Y4K1 1723 aa30.83■■■□□ 2.53
HOXD4-201ENST00000306324 PANK3Q9H999 370 aa30.83■■■□□ 2.53
HOXD4-201ENST00000306324 MED1Q15648 1581 aaPredicted RBP30.83■■■□□ 2.53
HOXD4-201ENST00000306324 HAP1P54257 671 aaPredicted RBP30.82■■■□□ 2.53
HOXD4-201ENST00000306324 NLRP6P59044 892 aa30.82■■■□□ 2.52
HOXD4-201ENST00000306324 LRP6O75581 1613 aa30.81■■■□□ 2.52
HOXD4-201ENST00000306324 NLRP13Q86W25 1043 aa30.81■■■□□ 2.52
HOXD4-201ENST00000306324 CARD14Q9BXL6 1004 aa30.81■■■□□ 2.52
HOXD4-201ENST00000306324 NSD3Q9BZ95 1437 aa30.81■■■□□ 2.52
HOXD4-201ENST00000306324 PHRF1Q9P1Y6 1649 aaKnown RBP30.81■■■□□ 2.52
HOXD4-201ENST00000306324 KIF20BQ96Q89 1820 aa30.81■■■□□ 2.52
HOXD4-201ENST00000306324 NME9Q86XW9 330 aa30.8■■■□□ 2.52
HOXD4-201ENST00000306324 MARF1Q9Y4F3 1742 aaKnown RBP30.8■■■□□ 2.52
HOXD4-201ENST00000306324 ADAMTS2O95450 1211 aa30.77■■■□□ 2.52
HOXD4-201ENST00000306324 MEX3CQ5U5Q3 659 aaKnown RBP30.76■■■□□ 2.52
HOXD4-201ENST00000306324 ZRANB1Q9UGI0 708 aa30.76■■■□□ 2.52
HOXD4-201ENST00000306324 USP54Q70EL1 1684 aa30.74■■■□□ 2.51
HOXD4-201ENST00000306324 USP19O94966 1318 aa30.73■■■□□ 2.51
HOXD4-201ENST00000306324 USP31Q70CQ4 1352 aa30.72■■■□□ 2.51
HOXD4-201ENST00000306324 FYB1O15117 783 aa30.7■■■□□ 2.51
HOXD4-201ENST00000306324 CGNL1Q0VF96 1302 aa30.7■■■□□ 2.51
HOXD4-201ENST00000306324 GGNBP2Q9H3C7 697 aa30.7■■■□□ 2.5
HOXD4-201ENST00000306324 SLIT3O75094 1523 aa30.69■■■□□ 2.5
HOXD4-201ENST00000306324 SOX12O15370 315 aa30.68■■■□□ 2.5
HOXD4-201ENST00000306324 GCP02774 474 aa30.68■■■□□ 2.5
HOXD4-201ENST00000306324 COG3Q96JB2 828 aa30.68■■■□□ 2.5
HOXD4-201ENST00000306324 KNSTRNQ9Y448 316 aa30.68■■■□□ 2.5
HOXD4-201ENST00000306324 OVOS2A0A0J9YW53 1432 aa30.67■■■□□ 2.5
HOXD4-201ENST00000306324 OVOS2Q6IE36 1432 aa30.67■■■□□ 2.5
HOXD4-201ENST00000306324 C8orf37Q96NL8 207 aa30.67■■■□□ 2.5
HOXD4-201ENST00000306324 ANKRD26Q9UPS8 1709 aa30.65■■■□□ 2.5
HOXD4-201ENST00000306324 ZC3H6P61129 1189 aaKnown RBP30.65■■■□□ 2.5
HOXD4-201ENST00000306324 ZNF316A6NFI3 1004 aaPredicted RBP30.64■■■□□ 2.5
HOXD4-201ENST00000306324 KCNH5Q8NCM2 988 aa30.63■■■□□ 2.49
HOXD4-201ENST00000306324 NGLY1Q96IV0 654 aa30.63■■■□□ 2.49
HOXD4-201ENST00000306324 KIAA0232Q92628 1395 aa30.62■■■□□ 2.49
HOXD4-201ENST00000306324 PHF23Q9BUL5 403 aaPredicted RBP30.61■■■□□ 2.49
HOXD4-201ENST00000306324 PRDM11Q9NQV5 511 aa30.61■■■□□ 2.49
HOXD4-201ENST00000306324 LTN1O94822 1766 aa30.6■■■□□ 2.49
HOXD4-201ENST00000306324 PLCH1Q4KWH8 1693 aa30.6■■■□□ 2.49
HOXD4-201ENST00000306324 ZBTB7CA1YPR0 619 aa30.6■■■□□ 2.49
HOXD4-201ENST00000306324 PER1O15534 1290 aaPredicted RBP30.6■■■□□ 2.49
HOXD4-201ENST00000306324 NFAT5O94916 1531 aa30.6■■■□□ 2.49
HOXD4-201ENST00000306324 COL14A1Q05707 1796 aaKnown RBP30.6■■■□□ 2.49
HOXD4-201ENST00000306324 FAM83GA6ND36 823 aa30.58■■■□□ 2.49
HOXD4-201ENST00000306324 DDX10Q13206 875 aaKnown RBP30.58■■■□□ 2.49
HOXD4-201ENST00000306324 AFF2P51816 1311 aa30.57■■■□□ 2.48
HOXD4-201ENST00000306324 CHRNA2Q15822 529 aa30.57■■■□□ 2.48
HOXD4-201ENST00000306324 CPDO75976 1380 aa30.56■■■□□ 2.48
HOXD4-201ENST00000306324 NSD2O96028 1365 aa30.56■■■□□ 2.48
HOXD4-201ENST00000306324 AMER1Q5JTC6 1135 aaPredicted RBP30.55■■■□□ 2.48
HOXD4-201ENST00000306324 NWD2Q9ULI1 1742 aa30.55■■■□□ 2.48
HOXD4-201ENST00000306324 CNGB1Q14028 1251 aaPredicted RBP30.53■■■□□ 2.48
HOXD4-201ENST00000306324 RGPD5Q99666 1765 aa30.52■■■□□ 2.48
HOXD4-201ENST00000306324 FBLN1P23142 703 aa30.52■■■□□ 2.48
HOXD4-201ENST00000306324 MAP2P11137 1827 aaKnown RBP30.52■■■□□ 2.48
HOXD4-201ENST00000306324 CC2D1BQ5T0F9 858 aaKnown RBP30.51■■■□□ 2.48
HOXD4-201ENST00000306324 ARHGEF25Q86VW2 580 aa30.51■■■□□ 2.48
HOXD4-201ENST00000306324 SLIT2O94813 1529 aa30.51■■■□□ 2.47
HOXD4-201ENST00000306324 FNBP4Q8N3X1 1017 aaPredicted RBP30.5■■■□□ 2.47
HOXD4-201ENST00000306324 COL18A1P39060 1754 aa30.5■■■□□ 2.47
HOXD4-201ENST00000306324 BTG4Q9NY30 223 aa30.5■■■□□ 2.47
HOXD4-201ENST00000306324 USP21Q9UK80 565 aa30.5■■■□□ 2.47
HOXD4-201ENST00000306324 LMO7Q8WWI1 1683 aa30.49■■■□□ 2.47
HOXD4-201ENST00000306324 TNNT2P45379 298 aaPredicted RBP30.49■■■□□ 2.47
HOXD4-201ENST00000306324 MORC1Q86VD1 984 aa30.49■■■□□ 2.47
HOXD4-201ENST00000306324 NRAPQ86VF7 1730 aa30.48■■■□□ 2.47
HOXD4-201ENST00000306324 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.48■■■□□ 2.47
HOXD4-201ENST00000306324 AATKQ6ZMQ8 1374 aa30.47■■■□□ 2.47
HOXD4-201ENST00000306324 BCL9LQ86UU0 1499 aa30.46■■■□□ 2.47
HOXD4-201ENST00000306324 RRS1Q15050 365 aaKnown RBP30.46■■■□□ 2.47
HOXD4-201ENST00000306324 ZNF772Q68DY9 489 aaPredicted RBP30.46■■■□□ 2.47
HOXD4-201ENST00000306324 RGS17Q9UGC6 210 aaPredicted RBP30.46■■■□□ 2.47
HOXD4-201ENST00000306324 CAMTA1Q9Y6Y1 1673 aa30.45■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms