RNA–Protein interactions for RNA: ENST00000306256.13

RER1-201, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 5

Gene RER1, Length 695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-201ENST00000306256 NBPF1Q3BBV0 1214 aa29.76■■■□□ 2.35
RER1-201ENST00000306256 CDK19Q9BWU1 502 aa29.74■■■□□ 2.35
RER1-201ENST00000306256 SEPT12Q8IYM1 358 aa29.73■■■□□ 2.35
RER1-201ENST00000306256 BTG4Q9NY30 223 aa29.7■■■□□ 2.35
RER1-201ENST00000306256 PHRF1Q9P1Y6 1649 aaKnown RBP29.7■■■□□ 2.34
RER1-201ENST00000306256 CCDC125Q86Z20 511 aa29.68■■■□□ 2.34
RER1-201ENST00000306256 QRICH2Q9H0J4 1663 aa29.67■■■□□ 2.34
RER1-201ENST00000306256 POLR3AO14802 1390 aaPredicted RBP29.64■■■□□ 2.34
RER1-201ENST00000306256 BLMP54132 1417 aaPredicted RBP29.64■■■□□ 2.34
RER1-201ENST00000306256 ONECUT3O60422 494 aaPredicted RBP29.64■■■□□ 2.34
RER1-201ENST00000306256 CCDC61Q9Y6R9 512 aa29.64■■■□□ 2.34
RER1-201ENST00000306256 ACEP12821 1306 aa29.64■■■□□ 2.34
RER1-201ENST00000306256 A0A0G2JS52 829 aa29.63■■■□□ 2.33
RER1-201ENST00000306256 MYT1Q01538 1121 aa29.63■■■□□ 2.33
RER1-201ENST00000306256 NUTM2GQ5VZR2 741 aa29.63■■■□□ 2.33
RER1-201ENST00000306256 PRDM11Q9NQV5 511 aa29.63■■■□□ 2.33
RER1-201ENST00000306256 FAM98CQ17RN3 349 aaKnown RBP29.62■■■□□ 2.33
RER1-201ENST00000306256 L3MBTL2Q969R5 705 aa29.62■■■□□ 2.33
RER1-201ENST00000306256 CENPJQ9HC77 1338 aaPredicted RBP29.62■■■□□ 2.33
RER1-201ENST00000306256 NBPF8Q3BBV2 869 aa29.61■■■□□ 2.33
RER1-201ENST00000306256 KRT27Q7Z3Y8 459 aa29.61■■■□□ 2.33
RER1-201ENST00000306256 SIN3AQ96ST3 1273 aa29.6■■■□□ 2.33
RER1-201ENST00000306256 KIAA0232Q92628 1395 aa29.6■■■□□ 2.33
RER1-201ENST00000306256 PLEKHG3A1L390 1219 aa29.59■■■□□ 2.33
RER1-201ENST00000306256 SRPK2P78362 688 aaKnown RBP29.59■■■□□ 2.33
RER1-201ENST00000306256 TRPM1Q7Z4N2 1603 aa29.59■■■□□ 2.33
RER1-201ENST00000306256 ZRANB1Q9UGI0 708 aa29.58■■■□□ 2.33
RER1-201ENST00000306256 PPIP5K1Q6PFW1 1433 aa29.57■■■□□ 2.32
RER1-201ENST00000306256 CHRNA2Q15822 529 aa29.57■■■□□ 2.32
RER1-201ENST00000306256 SPATA31A5Q5VU36 1347 aa29.56■■■□□ 2.32
RER1-201ENST00000306256 SPATA31A7Q8IWB4 1347 aa29.56■■■□□ 2.32
RER1-201ENST00000306256 DEFB132Q7Z7B7 95 aa29.56■■■□□ 2.32
RER1-201ENST00000306256 CABP2Q9NPB3 220 aa29.56■■■□□ 2.32
RER1-201ENST00000306256 NRKQ7Z2Y5 1582 aa29.56■■■□□ 2.32
RER1-201ENST00000306256 ZC3H6P61129 1189 aaKnown RBP29.55■■■□□ 2.32
RER1-201ENST00000306256 THSD7AQ9UPZ6 1657 aa29.54■■■□□ 2.32
RER1-201ENST00000306256 NEUROD1Q13562 356 aa29.53■■■□□ 2.32
RER1-201ENST00000306256 SF3B2Q13435 895 aaKnown RBP29.52■■■□□ 2.32
RER1-201ENST00000306256 ABTB2Q8N961 1025 aa29.51■■■□□ 2.31
RER1-201ENST00000306256 STRN4Q9NRL3 753 aa29.51■■■□□ 2.31
RER1-201ENST00000306256 FAM182BQ5T319 152 aa29.47■■■□□ 2.31
RER1-201ENST00000306256 USP19O94966 1318 aa29.46■■■□□ 2.31
RER1-201ENST00000306256 SPATA31A1Q5TZJ5 1347 aa29.46■■■□□ 2.31
RER1-201ENST00000306256 RGPD1P0DJD0 1748 aa29.46■■■□□ 2.31
RER1-201ENST00000306256 LMO7Q8WWI1 1683 aa29.46■■■□□ 2.31
RER1-201ENST00000306256 ROCK2O75116 1388 aaKnown RBP29.45■■■□□ 2.31
RER1-201ENST00000306256 CAMTA1Q9Y6Y1 1673 aa29.44■■■□□ 2.3
RER1-201ENST00000306256 CABP1Q9NZU7 370 aa29.44■■■□□ 2.3
RER1-201ENST00000306256 USP6P35125 1406 aa29.43■■■□□ 2.3
RER1-201ENST00000306256 SSH2Q76I76 1423 aa29.43■■■□□ 2.3
RER1-201ENST00000306256 CPDO75976 1380 aa29.41■■■□□ 2.3
RER1-201ENST00000306256 NLRP13Q86W25 1043 aa29.41■■■□□ 2.3
RER1-201ENST00000306256 TNS1Q9HBL0 1735 aaKnown RBP29.41■■■□□ 2.3
RER1-201ENST00000306256 USP35Q9P2H5 1018 aa29.41■■■□□ 2.3
RER1-201ENST00000306256 EVC2Q86UK5 1308 aa29.41■■■□□ 2.3
RER1-201ENST00000306256 EVA1CP58658 441 aa29.4■■■□□ 2.3
RER1-201ENST00000306256 PIK3C2AO00443 1686 aa29.39■■■□□ 2.3
RER1-201ENST00000306256 AKAP12Q02952 1782 aa29.39■■■□□ 2.29
RER1-201ENST00000306256 BRD4O60885 1362 aaPredicted RBP29.39■■■□□ 2.29
RER1-201ENST00000306256 GCP02774 474 aa29.38■■■□□ 2.29
RER1-201ENST00000306256 BAG6P46379 1132 aa29.38■■■□□ 2.29
RER1-201ENST00000306256 SRCAPQ6ZRS2 3230 aa29.37■■■□□ 2.29
RER1-201ENST00000306256 LARP1Q6PKG0 1096 aaKnown RBP29.37■■■□□ 2.29
RER1-201ENST00000306256 SLIT3O75094 1523 aa29.35■■■□□ 2.29
RER1-201ENST00000306256 ZBTB7CA1YPR0 619 aa29.34■■■□□ 2.29
RER1-201ENST00000306256 NLRP6P59044 892 aa29.34■■■□□ 2.29
RER1-201ENST00000306256 COL5A2P05997 1499 aaPredicted RBP29.32■■■□□ 2.28
RER1-201ENST00000306256 EN1Q05925 392 aaPredicted RBP29.32■■■□□ 2.28
RER1-201ENST00000306256 BARGINQ6ZT62 677 aa29.31■■■□□ 2.28
RER1-201ENST00000306256 COL18A1P39060 1754 aa29.29■■■□□ 2.28
RER1-201ENST00000306256 TCP11L2Q8N4U5 519 aa29.29■■■□□ 2.28
RER1-201ENST00000306256 RGPD5Q99666 1765 aa29.28■■■□□ 2.28
RER1-201ENST00000306256 PSDA5PKW4 1024 aaPredicted RBP29.27■■■□□ 2.28
RER1-201ENST00000306256 FAM196AQ6ZSG2 479 aa29.27■■■□□ 2.28
RER1-201ENST00000306256 PARP4Q9UKK3 1724 aaKnown RBP29.27■■■□□ 2.28
RER1-201ENST00000306256 DISP2A7MBM2 1401 aa29.27■■■□□ 2.28
RER1-201ENST00000306256 TRIM37O94972 964 aa29.26■■■□□ 2.27
RER1-201ENST00000306256 MON2Q7Z3U7 1717 aa29.25■■■□□ 2.27
RER1-201ENST00000306256 TTC21BQ7Z4L5 1316 aa29.25■■■□□ 2.27
RER1-201ENST00000306256 AATKQ6ZMQ8 1374 aa29.25■■■□□ 2.27
RER1-201ENST00000306256 PDE3BQ13370 1112 aa29.24■■■□□ 2.27
RER1-201ENST00000306256 CRB1P82279 1406 aa29.23■■■□□ 2.27
RER1-201ENST00000306256 CPSF1Q10570 1443 aaKnown RBP29.22■■■□□ 2.27
RER1-201ENST00000306256 ZNF692Q9BU19 519 aaPredicted RBP29.22■■■□□ 2.27
RER1-201ENST00000306256 CARD11Q9BXL7 1154 aa29.22■■■□□ 2.27
RER1-201ENST00000306256 LRP5O75197 1615 aa29.22■■■□□ 2.27
RER1-201ENST00000306256 WNK3Q9BYP7 1800 aa29.22■■■□□ 2.27
RER1-201ENST00000306256 EZH2Q15910 746 aaKnown RBP29.21■■■□□ 2.27
RER1-201ENST00000306256 THRAP3Q9Y2W1 955 aaKnown RBP29.21■■■□□ 2.27
RER1-201ENST00000306256 TONSLQ96HA7 1378 aa29.21■■■□□ 2.27
RER1-201ENST00000306256 SBNO2Q9Y2G9 1366 aa29.21■■■□□ 2.27
RER1-201ENST00000306256 SOX12O15370 315 aa29.2■■■□□ 2.26
RER1-201ENST00000306256 KTN1Q86UP2 1357 aaKnown RBP29.2■■■□□ 2.26
RER1-201ENST00000306256 LRRC37A3O60309 1634 aa29.19■■■□□ 2.26
RER1-201ENST00000306256 TTC21AQ8NDW8 1320 aa29.19■■■□□ 2.26
RER1-201ENST00000306256 AXIN2Q9Y2T1 843 aa29.17■■■□□ 2.26
RER1-201ENST00000306256 NFAT5O94916 1531 aa29.16■■■□□ 2.26
RER1-201ENST00000306256 APBA3O96018 575 aa29.16■■■□□ 2.26
RER1-201ENST00000306256 CAMKK2Q96RR4 588 aa29.16■■■□□ 2.26
RER1-201ENST00000306256 RREB1Q92766 1687 aa29.15■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms