RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 PLEKHG5O94827 1062 aa23.96■■□□□ 1.43
TRAPPC1-201ENST00000303731 QRICH2Q9H0J4 1663 aa23.95■■□□□ 1.43
TRAPPC1-201ENST00000303731 PLEKHG3A1L390 1219 aa23.95■■□□□ 1.42
TRAPPC1-201ENST00000303731 TRPM1Q7Z4N2 1603 aa23.95■■□□□ 1.42
TRAPPC1-201ENST00000303731 EP400Q96L91 3159 aa23.95■■□□□ 1.42
TRAPPC1-201ENST00000303731 FAM83GA6ND36 823 aa23.94■■□□□ 1.42
TRAPPC1-201ENST00000303731 CCDC125Q86Z20 511 aa23.94■■□□□ 1.42
TRAPPC1-201ENST00000303731 NRAPQ86VF7 1730 aa23.93■■□□□ 1.42
TRAPPC1-201ENST00000303731 ACEP12821 1306 aa23.93■■□□□ 1.42
TRAPPC1-201ENST00000303731 SIN3AQ96ST3 1273 aa23.93■■□□□ 1.42
TRAPPC1-201ENST00000303731 SRPK2P78362 688 aaKnown RBP23.92■■□□□ 1.42
TRAPPC1-201ENST00000303731 NBPF8Q3BBV2 869 aa23.91■■□□□ 1.42
TRAPPC1-201ENST00000303731 CCDC9Q9Y3X0 531 aaKnown RBP23.91■■□□□ 1.42
TRAPPC1-201ENST00000303731 ONECUT3O60422 494 aaPredicted RBP23.9■■□□□ 1.42
TRAPPC1-201ENST00000303731 NEUROD1Q13562 356 aa23.9■■□□□ 1.42
TRAPPC1-201ENST00000303731 BTG4Q9NY30 223 aa23.9■■□□□ 1.42
TRAPPC1-201ENST00000303731 BRD4O60885 1362 aaPredicted RBP23.9■■□□□ 1.42
TRAPPC1-201ENST00000303731 PHRF1Q9P1Y6 1649 aaKnown RBP23.89■■□□□ 1.42
TRAPPC1-201ENST00000303731 PPIP5K1Q6PFW1 1433 aa23.89■■□□□ 1.41
TRAPPC1-201ENST00000303731 ROCK2O75116 1388 aaKnown RBP23.89■■□□□ 1.41
TRAPPC1-201ENST00000303731 PRDM11Q9NQV5 511 aa23.88■■□□□ 1.41
TRAPPC1-201ENST00000303731 BRWD3Q6RI45 1802 aa23.88■■□□□ 1.41
TRAPPC1-201ENST00000303731 SEPT12Q8IYM1 358 aa23.87■■□□□ 1.41
TRAPPC1-201ENST00000303731 EVC2Q86UK5 1308 aa23.84■■□□□ 1.41
TRAPPC1-201ENST00000303731 CABP2Q9NPB3 220 aa23.84■■□□□ 1.41
TRAPPC1-201ENST00000303731 ABTB2Q8N961 1025 aa23.83■■□□□ 1.41
TRAPPC1-201ENST00000303731 BLMP54132 1417 aaPredicted RBP23.83■■□□□ 1.4
TRAPPC1-201ENST00000303731 KIAA0232Q92628 1395 aa23.82■■□□□ 1.4
TRAPPC1-201ENST00000303731 KRT27Q7Z3Y8 459 aa23.8■■□□□ 1.4
TRAPPC1-201ENST00000303731 NLRP13Q86W25 1043 aa23.8■■□□□ 1.4
TRAPPC1-201ENST00000303731 SPATA31A5Q5VU36 1347 aa23.8■■□□□ 1.4
TRAPPC1-201ENST00000303731 SPATA31A7Q8IWB4 1347 aa23.8■■□□□ 1.4
TRAPPC1-201ENST00000303731 NRKQ7Z2Y5 1582 aa23.79■■□□□ 1.4
TRAPPC1-201ENST00000303731 USP19O94966 1318 aa23.79■■□□□ 1.4
TRAPPC1-201ENST00000303731 A0A0G2JS52 829 aa23.78■■□□□ 1.4
TRAPPC1-201ENST00000303731 MYT1Q01538 1121 aa23.78■■□□□ 1.4
TRAPPC1-201ENST00000303731 FAM98CQ17RN3 349 aaKnown RBP23.78■■□□□ 1.4
TRAPPC1-201ENST00000303731 NUTM2GQ5VZR2 741 aa23.78■■□□□ 1.4
TRAPPC1-201ENST00000303731 CPDO75976 1380 aa23.78■■□□□ 1.4
TRAPPC1-201ENST00000303731 USP6P35125 1406 aa23.77■■□□□ 1.4
TRAPPC1-201ENST00000303731 CABP1Q9NZU7 370 aa23.77■■□□□ 1.4
TRAPPC1-201ENST00000303731 TONSLQ96HA7 1378 aa23.77■■□□□ 1.4
TRAPPC1-201ENST00000303731 ZC3H6P61129 1189 aaKnown RBP23.76■■□□□ 1.39
TRAPPC1-201ENST00000303731 SF3B2Q13435 895 aaKnown RBP23.76■■□□□ 1.39
TRAPPC1-201ENST00000303731 SBNO2Q9Y2G9 1366 aa23.76■■□□□ 1.39
TRAPPC1-201ENST00000303731 TRIM26Q12899 539 aaPredicted RBP23.75■■□□□ 1.39
TRAPPC1-201ENST00000303731 THSD7AQ9UPZ6 1657 aa23.74■■□□□ 1.39
TRAPPC1-201ENST00000303731 CHRNA2Q15822 529 aa23.73■■□□□ 1.39
TRAPPC1-201ENST00000303731 ZNF692Q9BU19 519 aaPredicted RBP23.73■■□□□ 1.39
TRAPPC1-201ENST00000303731 ZRANB1Q9UGI0 708 aa23.73■■□□□ 1.39
TRAPPC1-201ENST00000303731 SPATA31A1Q5TZJ5 1347 aa23.73■■□□□ 1.39
TRAPPC1-201ENST00000303731 GCP02774 474 aa23.72■■□□□ 1.39
TRAPPC1-201ENST00000303731 LMO7Q8WWI1 1683 aa23.71■■□□□ 1.39
TRAPPC1-201ENST00000303731 CARD11Q9BXL7 1154 aa23.71■■□□□ 1.39
TRAPPC1-201ENST00000303731 AKAP12Q02952 1782 aa23.7■■□□□ 1.39
TRAPPC1-201ENST00000303731 SSH2Q76I76 1423 aa23.7■■□□□ 1.38
TRAPPC1-201ENST00000303731 EVA1CP58658 441 aa23.7■■□□□ 1.38
TRAPPC1-201ENST00000303731 STRN4Q9NRL3 753 aa23.7■■□□□ 1.38
TRAPPC1-201ENST00000303731 SLIT3O75094 1523 aa23.69■■□□□ 1.38
TRAPPC1-201ENST00000303731 CAMTA1Q9Y6Y1 1673 aa23.68■■□□□ 1.38
TRAPPC1-201ENST00000303731 NLRP6P59044 892 aa23.68■■□□□ 1.38
TRAPPC1-201ENST00000303731 PIK3C2AO00443 1686 aa23.67■■□□□ 1.38
TRAPPC1-201ENST00000303731 TTC21AQ8NDW8 1320 aa23.66■■□□□ 1.38
TRAPPC1-201ENST00000303731 BARGINQ6ZT62 677 aa23.66■■□□□ 1.38
TRAPPC1-201ENST00000303731 RGPD1P0DJD0 1748 aa23.66■■□□□ 1.38
TRAPPC1-201ENST00000303731 CPSF1Q10570 1443 aaKnown RBP23.65■■□□□ 1.38
TRAPPC1-201ENST00000303731 BAG6P46379 1132 aa23.64■■□□□ 1.37
TRAPPC1-201ENST00000303731 THRAP3Q9Y2W1 955 aaKnown RBP23.64■■□□□ 1.37
TRAPPC1-201ENST00000303731 AATKQ6ZMQ8 1374 aa23.64■■□□□ 1.37
TRAPPC1-201ENST00000303731 TTC21BQ7Z4L5 1316 aa23.63■■□□□ 1.37
TRAPPC1-201ENST00000303731 COL5A2P05997 1499 aaPredicted RBP23.63■■□□□ 1.37
TRAPPC1-201ENST00000303731 DEFB132Q7Z7B7 95 aa23.62■■□□□ 1.37
TRAPPC1-201ENST00000303731 TCP11L2Q8N4U5 519 aa23.62■■□□□ 1.37
TRAPPC1-201ENST00000303731 KCNH5Q8NCM2 988 aa23.62■■□□□ 1.37
TRAPPC1-201ENST00000303731 KTN1Q86UP2 1357 aaKnown RBP23.62■■□□□ 1.37
TRAPPC1-201ENST00000303731 MON2Q7Z3U7 1717 aa23.62■■□□□ 1.37
TRAPPC1-201ENST00000303731 LARP1Q6PKG0 1096 aaKnown RBP23.61■■□□□ 1.37
TRAPPC1-201ENST00000303731 SLC24A1O60721 1099 aa23.6■■□□□ 1.37
TRAPPC1-201ENST00000303731 PUS7Q96PZ0 661 aaKnown RBP23.6■■□□□ 1.37
TRAPPC1-201ENST00000303731 USP35Q9P2H5 1018 aa23.6■■□□□ 1.37
TRAPPC1-201ENST00000303731 FAM196AQ6ZSG2 479 aa23.59■■□□□ 1.37
TRAPPC1-201ENST00000303731 SRCAPQ6ZRS2 3230 aa23.59■■□□□ 1.37
TRAPPC1-201ENST00000303731 CRB1P82279 1406 aa23.59■■□□□ 1.37
TRAPPC1-201ENST00000303731 DISP2A7MBM2 1401 aa23.58■■□□□ 1.36
TRAPPC1-201ENST00000303731 PDE3BQ13370 1112 aa23.57■■□□□ 1.36
TRAPPC1-201ENST00000303731 PARP4Q9UKK3 1724 aaKnown RBP23.56■■□□□ 1.36
TRAPPC1-201ENST00000303731 COL18A1P39060 1754 aa23.56■■□□□ 1.36
TRAPPC1-201ENST00000303731 TNS1Q9HBL0 1735 aaKnown RBP23.56■■□□□ 1.36
TRAPPC1-201ENST00000303731 ABCC6O95255 1503 aa23.55■■□□□ 1.36
TRAPPC1-201ENST00000303731 USP54Q70EL1 1684 aa23.55■■□□□ 1.36
TRAPPC1-201ENST00000303731 ZBTB7CA1YPR0 619 aa23.55■■□□□ 1.36
TRAPPC1-201ENST00000303731 C11orf95C9JLR9 678 aaPredicted RBP23.55■■□□□ 1.36
TRAPPC1-201ENST00000303731 FAM182BQ5T319 152 aa23.54■■□□□ 1.36
TRAPPC1-201ENST00000303731 HDGFL2Q7Z4V5 671 aaPredicted RBP23.54■■□□□ 1.36
TRAPPC1-201ENST00000303731 NINLQ9Y2I6 1382 aa23.53■■□□□ 1.36
TRAPPC1-201ENST00000303731 ARHGEF25Q86VW2 580 aa23.53■■□□□ 1.36
TRAPPC1-201ENST00000303731 USP31Q70CQ4 1352 aa23.52■■□□□ 1.36
TRAPPC1-201ENST00000303731 CD163L1Q9NR16 1453 aa23.52■■□□□ 1.36
TRAPPC1-201ENST00000303731 TMC1Q8TDI8 760 aa23.52■■□□□ 1.36
TRAPPC1-201ENST00000303731 TERF2IPQ9NYB0 399 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms