RNA–Protein interactions for RNA: ENST00000300146.9

PATL1-201, Transcript of PAT1 homolog 1, processing body mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PATL1, Length 4,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATL1-201ENST00000300146 DDX54Q8TDD1 881 aaKnown RBP7.86□□□□□ -1.15
PATL1-201ENST00000300146 SETBP1Q9Y6X0 1596 aa7.86□□□□□ -1.15
PATL1-201ENST00000300146 NCOA3Q9Y6Q9 1424 aa7.86□□□□□ -1.15
PATL1-201ENST00000300146 RRS1Q15050 365 aaKnown RBP7.86□□□□□ -1.15
PATL1-201ENST00000300146 ACSBG1Q96GR2 724 aa7.86□□□□□ -1.15
PATL1-201ENST00000300146 AMPHP49418 695 aa7.86□□□□□ -1.15
PATL1-201ENST00000300146 NRXN3Q9Y4C0 1643 aa7.86□□□□□ -1.15
PATL1-201ENST00000300146 PPIP5K1Q6PFW1 1433 aa7.86□□□□□ -1.15
PATL1-201ENST00000300146 SLC24A1O60721 1099 aa7.85□□□□□ -1.15
PATL1-201ENST00000300146 KLHL34Q8N239 644 aa7.85□□□□□ -1.15
PATL1-201ENST00000300146 FNBP4Q8N3X1 1017 aaPredicted RBP7.85□□□□□ -1.15
PATL1-201ENST00000300146 XIRP1Q702N8 1843 aaKnown RBP7.85□□□□□ -1.15
PATL1-201ENST00000300146 USHBP1Q8N6Y0 703 aa7.85□□□□□ -1.15
PATL1-201ENST00000300146 STAC3Q96MF2 364 aa7.84□□□□□ -1.15
PATL1-201ENST00000300146 APBA3O96018 575 aa7.84□□□□□ -1.15
PATL1-201ENST00000300146 SIRT1Q96EB6 747 aa7.84□□□□□ -1.15
PATL1-201ENST00000300146 KTN1Q86UP2 1357 aaKnown RBP7.84□□□□□ -1.15
PATL1-201ENST00000300146 DCCP43146 1447 aa7.84□□□□□ -1.15
PATL1-201ENST00000300146 PRAG1Q86YV5 1406 aa7.84□□□□□ -1.15
PATL1-201ENST00000300146 TERF2IPQ9NYB0 399 aa7.83□□□□□ -1.16
PATL1-201ENST00000300146 AXIN2Q9Y2T1 843 aa7.83□□□□□ -1.16
PATL1-201ENST00000300146 TMF1P82094 1093 aa7.83□□□□□ -1.16
PATL1-201ENST00000300146 TTC21BQ7Z4L5 1316 aa7.83□□□□□ -1.16
PATL1-201ENST00000300146 KDM5AP29375 1690 aaKnown RBP7.83□□□□□ -1.16
PATL1-201ENST00000300146 ARHGEF10O15013 1369 aa7.82□□□□□ -1.16
PATL1-201ENST00000300146 DIP2AQ14689 1571 aa7.82□□□□□ -1.16
PATL1-201ENST00000300146 KCNQ4P56696 695 aa7.82□□□□□ -1.16
PATL1-201ENST00000300146 TNS3Q68CZ2 1445 aa7.82□□□□□ -1.16
PATL1-201ENST00000300146 NWD1Q149M9 1564 aa7.82□□□□□ -1.16
PATL1-201ENST00000300146 COG3Q96JB2 828 aa7.82□□□□□ -1.16
PATL1-201ENST00000300146 R3HDM1Q15032 1099 aaKnown RBP7.82□□□□□ -1.16
PATL1-201ENST00000300146 PPP1R1BQ9UD71 204 aaPredicted RBP7.82□□□□□ -1.16
PATL1-201ENST00000300146 EIF3AQ14152 1382 aaKnown RBP7.81□□□□□ -1.16
PATL1-201ENST00000300146 MSH5O43196 834 aa7.81□□□□□ -1.16
PATL1-201ENST00000300146 PLEKHG3A1L390 1219 aa7.81□□□□□ -1.16
PATL1-201ENST00000300146 HSPA5P11021 654 aaKnown RBP7.81□□□□□ -1.16
PATL1-201ENST00000300146 NALCNQ8IZF0 1738 aa7.81□□□□□ -1.16
PATL1-201ENST00000300146 VPS72Q15906 364 aa7.81□□□□□ -1.16
PATL1-201ENST00000300146 DDB1Q16531 1140 aa7.81□□□□□ -1.16
PATL1-201ENST00000300146 WWC3Q9ULE0 1092 aa7.81□□□□□ -1.16
PATL1-201ENST00000300146 BAG6P46379 1132 aa7.8□□□□□ -1.16
PATL1-201ENST00000300146 EIF4G2P78344 907 aaKnown RBP eCLIP7.8□□□□□ -1.16
PATL1-201ENST00000300146 EZH2Q15910 746 aaKnown RBP7.8□□□□□ -1.16
PATL1-201ENST00000300146 PTF1AQ7RTS3 328 aa7.8□□□□□ -1.16
PATL1-201ENST00000300146 TCP11L2Q8N4U5 519 aa7.8□□□□□ -1.16
PATL1-201ENST00000300146 ZNF692Q9BU19 519 aaPredicted RBP7.8□□□□□ -1.16
PATL1-201ENST00000300146 BCL11BQ9C0K0 894 aaPredicted RBP7.8□□□□□ -1.16
PATL1-201ENST00000300146 COL16A1Q07092 1604 aaPredicted RBP7.8□□□□□ -1.16
PATL1-201ENST00000300146 PPLO60437 1756 aa7.8□□□□□ -1.16
PATL1-201ENST00000300146 CC2D1BQ5T0F9 858 aaKnown RBP7.79□□□□□ -1.16
PATL1-201ENST00000300146 RGS12O14924 1447 aa7.79□□□□□ -1.16
PATL1-201ENST00000300146 USP47Q96K76 1375 aa7.79□□□□□ -1.16
PATL1-201ENST00000300146 EXOC5O00471 708 aa7.79□□□□□ -1.16
PATL1-201ENST00000300146 XRN1Q8IZH2 1706 aaKnown RBP7.79□□□□□ -1.16
PATL1-201ENST00000300146 IFT172Q9UG01 1749 aa7.79□□□□□ -1.16
PATL1-201ENST00000300146 MYOM2P54296 1465 aa7.79□□□□□ -1.16
PATL1-201ENST00000300146 BCL9LQ86UU0 1499 aa7.79□□□□□ -1.16
PATL1-201ENST00000300146 TECPR2O15040 1411 aa7.79□□□□□ -1.16
PATL1-201ENST00000300146 SENP3-EIF4A1A0A087X0R7 540 aa7.78□□□□□ -1.16
PATL1-201ENST00000300146 ANKRD24Q8TF21 1146 aa7.78□□□□□ -1.16
PATL1-201ENST00000300146 ATAD2Q6PL18 1390 aa7.78□□□□□ -1.16
PATL1-201ENST00000300146 KCNQ2O43526 872 aa7.78□□□□□ -1.16
PATL1-201ENST00000300146 GOLGB1Q14789 3259 aaKnown RBP7.78□□□□□ -1.16
PATL1-201ENST00000300146 SETD1AO15047 1707 aaKnown RBP7.78□□□□□ -1.16
PATL1-201ENST00000300146 UTRNP46939 3433 aa7.77□□□□□ -1.17
PATL1-201ENST00000300146 EMILIN1Q9Y6C2 1016 aa7.77□□□□□ -1.17
PATL1-201ENST00000300146 PXDNQ92626 1479 aa7.77□□□□□ -1.17
PATL1-201ENST00000300146 PANK3Q9H999 370 aa7.77□□□□□ -1.17
PATL1-201ENST00000300146 SBNO1A3KN83 1393 aa7.77□□□□□ -1.17
PATL1-201ENST00000300146 HSP90AB2PQ58FF8 381 aa7.77□□□□□ -1.17
PATL1-201ENST00000300146 RALGAPBQ86X10 1494 aa7.76□□□□□ -1.17
PATL1-201ENST00000300146 KCNH5Q8NCM2 988 aa7.76□□□□□ -1.17
PATL1-201ENST00000300146 SPATA31A5Q5VU36 1347 aa7.76□□□□□ -1.17
PATL1-201ENST00000300146 SPATA31A7Q8IWB4 1347 aa7.76□□□□□ -1.17
PATL1-201ENST00000300146 PELP1Q8IZL8 1130 aaKnown RBP7.76□□□□□ -1.17
PATL1-201ENST00000300146 RGPD8O14715 1765 aaPredicted RBP7.76□□□□□ -1.17
PATL1-201ENST00000300146 TESK2Q96S53 571 aa7.76□□□□□ -1.17
PATL1-201ENST00000300146 SPATA31A1Q5TZJ5 1347 aa7.76□□□□□ -1.17
PATL1-201ENST00000300146 ADGRB1O14514 1584 aa7.76□□□□□ -1.17
PATL1-201ENST00000300146 ATF5Q9Y2D1 282 aaPredicted RBP7.75□□□□□ -1.17
PATL1-201ENST00000300146 NRXN1Q9ULB1 1477 aa7.75□□□□□ -1.17
PATL1-201ENST00000300146 AHDC1Q5TGY3 1603 aaPredicted RBP7.75□□□□□ -1.17
PATL1-201ENST00000300146 ARHGEF25Q86VW2 580 aa7.75□□□□□ -1.17
PATL1-201ENST00000300146 ATP7BP35670 1465 aa7.75□□□□□ -1.17
PATL1-201ENST00000300146 FAM196AQ6ZSG2 479 aa7.75□□□□□ -1.17
PATL1-201ENST00000300146 ARXQ96QS3 562 aa7.74□□□□□ -1.17
PATL1-201ENST00000300146 FYB1O15117 783 aa7.74□□□□□ -1.17
PATL1-201ENST00000300146 ZBTB7AO95365 584 aa7.74□□□□□ -1.17
PATL1-201ENST00000300146 CDCA8Q53HL2 280 aa7.74□□□□□ -1.17
PATL1-201ENST00000300146 RAPGEF4Q8WZA2 1011 aa7.74□□□□□ -1.17
PATL1-201ENST00000300146 KNSTRNQ9Y448 316 aa7.74□□□□□ -1.17
PATL1-201ENST00000300146 ANKARQ7Z5J8 1434 aa7.74□□□□□ -1.17
PATL1-201ENST00000300146 A0A1W2PP64 1363 aa7.74□□□□□ -1.17
PATL1-201ENST00000300146 C11orf95C9JLR9 678 aaPredicted RBP7.74□□□□□ -1.17
PATL1-201ENST00000300146 MPRIPQ6WCQ1 1025 aa7.74□□□□□ -1.17
PATL1-201ENST00000300146 MORC1Q86VD1 984 aa7.74□□□□□ -1.17
PATL1-201ENST00000300146 MAP3K19Q56UN5 1328 aa7.73□□□□□ -1.17
PATL1-201ENST00000300146 SMIM5Q71RC9 77 aa7.73□□□□□ -1.17
PATL1-201ENST00000300146 CDC42BPGQ6DT37 1551 aa7.73□□□□□ -1.17
PATL1-201ENST00000300146 TULP4Q9NRJ4 1543 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms