RNA–Protein interactions for RNA: ENST00000296930.9

NPM1-201, Transcript of nucleophosmin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-201ENST00000296930 FAM83GA6ND36 823 aa23.48■■□□□ 1.35
NPM1-201ENST00000296930 VPS72Q15906 364 aa23.48■■□□□ 1.35
NPM1-201ENST00000296930 CCER1Q8TC90 406 aaPredicted RBP23.47■■□□□ 1.35
NPM1-201ENST00000296930 CRYBG1Q9Y4K1 1723 aa23.47■■□□□ 1.35
NPM1-201ENST00000296930 POLR3AO14802 1390 aaPredicted RBP23.47■■□□□ 1.35
NPM1-201ENST00000296930 QRICH2Q9H0J4 1663 aa23.46■■□□□ 1.35
NPM1-201ENST00000296930 NEUROD1Q13562 356 aa23.46■■□□□ 1.35
NPM1-201ENST00000296930 TRPM1Q7Z4N2 1603 aa23.46■■□□□ 1.35
NPM1-201ENST00000296930 COL14A1Q05707 1796 aaKnown RBP23.46■■□□□ 1.35
NPM1-201ENST00000296930 EP400Q96L91 3159 aa23.45■■□□□ 1.35
NPM1-201ENST00000296930 PLEKHG3A1L390 1219 aa23.45■■□□□ 1.34
NPM1-201ENST00000296930 ACEP12821 1306 aa23.45■■□□□ 1.34
NPM1-201ENST00000296930 CCDC9Q9Y3X0 531 aaKnown RBP23.44■■□□□ 1.34
NPM1-201ENST00000296930 NRAPQ86VF7 1730 aa23.44■■□□□ 1.34
NPM1-201ENST00000296930 SRPK2P78362 688 aaKnown RBP23.43■■□□□ 1.34
NPM1-201ENST00000296930 NBPF8Q3BBV2 869 aa23.43■■□□□ 1.34
NPM1-201ENST00000296930 BRWD3Q6RI45 1802 aa23.42■■□□□ 1.34
NPM1-201ENST00000296930 BTG4Q9NY30 223 aa23.41■■□□□ 1.34
NPM1-201ENST00000296930 CCDC125Q86Z20 511 aa23.4■■□□□ 1.34
NPM1-201ENST00000296930 ONECUT3O60422 494 aaPredicted RBP23.4■■□□□ 1.34
NPM1-201ENST00000296930 PPIP5K1Q6PFW1 1433 aa23.39■■□□□ 1.34
NPM1-201ENST00000296930 PHRF1Q9P1Y6 1649 aaKnown RBP23.39■■□□□ 1.33
NPM1-201ENST00000296930 SEPT12Q8IYM1 358 aa23.39■■□□□ 1.33
NPM1-201ENST00000296930 ROCK2O75116 1388 aaKnown RBP23.39■■□□□ 1.33
NPM1-201ENST00000296930 CABP2Q9NPB3 220 aa23.38■■□□□ 1.33
NPM1-201ENST00000296930 PRDM11Q9NQV5 511 aa23.38■■□□□ 1.33
NPM1-201ENST00000296930 NUTM2GQ5VZR2 741 aa23.35■■□□□ 1.33
NPM1-201ENST00000296930 KIAA0232Q92628 1395 aa23.35■■□□□ 1.33
NPM1-201ENST00000296930 ABTB2Q8N961 1025 aa23.35■■□□□ 1.33
NPM1-201ENST00000296930 EVC2Q86UK5 1308 aa23.34■■□□□ 1.33
NPM1-201ENST00000296930 BRD4O60885 1362 aaPredicted RBP23.33■■□□□ 1.33
NPM1-201ENST00000296930 CLSPNQ9HAW4 1339 aa23.31■■□□□ 1.32
NPM1-201ENST00000296930 BLMP54132 1417 aaPredicted RBP23.31■■□□□ 1.32
NPM1-201ENST00000296930 A0A0G2JS52 829 aa23.31■■□□□ 1.32
NPM1-201ENST00000296930 ZC3H6P61129 1189 aaKnown RBP23.31■■□□□ 1.32
NPM1-201ENST00000296930 MYT1Q01538 1121 aa23.31■■□□□ 1.32
NPM1-201ENST00000296930 FAM98CQ17RN3 349 aaKnown RBP23.31■■□□□ 1.32
NPM1-201ENST00000296930 KRT27Q7Z3Y8 459 aa23.31■■□□□ 1.32
NPM1-201ENST00000296930 CABP1Q9NZU7 370 aa23.31■■□□□ 1.32
NPM1-201ENST00000296930 SPATA31A5Q5VU36 1347 aa23.31■■□□□ 1.32
NPM1-201ENST00000296930 SPATA31A7Q8IWB4 1347 aa23.31■■□□□ 1.32
NPM1-201ENST00000296930 CHRNA2Q15822 529 aa23.29■■□□□ 1.32
NPM1-201ENST00000296930 NLRP13Q86W25 1043 aa23.29■■□□□ 1.32
NPM1-201ENST00000296930 NRKQ7Z2Y5 1582 aa23.29■■□□□ 1.32
NPM1-201ENST00000296930 USP19O94966 1318 aa23.29■■□□□ 1.32
NPM1-201ENST00000296930 USP6P35125 1406 aa23.29■■□□□ 1.32
NPM1-201ENST00000296930 TONSLQ96HA7 1378 aa23.27■■□□□ 1.32
NPM1-201ENST00000296930 CPDO75976 1380 aa23.26■■□□□ 1.31
NPM1-201ENST00000296930 SF3B2Q13435 895 aaKnown RBP23.24■■□□□ 1.31
NPM1-201ENST00000296930 STRN4Q9NRL3 753 aa23.24■■□□□ 1.31
NPM1-201ENST00000296930 SPATA31A1Q5TZJ5 1347 aa23.24■■□□□ 1.31
NPM1-201ENST00000296930 THSD7AQ9UPZ6 1657 aa23.24■■□□□ 1.31
NPM1-201ENST00000296930 GCP02774 474 aa23.24■■□□□ 1.31
NPM1-201ENST00000296930 CARD11Q9BXL7 1154 aa23.23■■□□□ 1.31
NPM1-201ENST00000296930 SBNO2Q9Y2G9 1366 aa23.23■■□□□ 1.31
NPM1-201ENST00000296930 EVA1CP58658 441 aa23.22■■□□□ 1.31
NPM1-201ENST00000296930 ZRANB1Q9UGI0 708 aa23.22■■□□□ 1.31
NPM1-201ENST00000296930 LMO7Q8WWI1 1683 aa23.22■■□□□ 1.31
NPM1-201ENST00000296930 NLRP6P59044 892 aa23.22■■□□□ 1.31
NPM1-201ENST00000296930 ZNF692Q9BU19 519 aaPredicted RBP23.22■■□□□ 1.31
NPM1-201ENST00000296930 SSH2Q76I76 1423 aa23.21■■□□□ 1.31
NPM1-201ENST00000296930 AKAP12Q02952 1782 aa23.21■■□□□ 1.31
NPM1-201ENST00000296930 CAMTA1Q9Y6Y1 1673 aa23.21■■□□□ 1.31
NPM1-201ENST00000296930 ZEB1P37275 1124 aaPredicted RBP23.21■■□□□ 1.31
NPM1-201ENST00000296930 PIK3C2AO00443 1686 aa23.19■■□□□ 1.3
NPM1-201ENST00000296930 SLIT3O75094 1523 aa23.19■■□□□ 1.3
NPM1-201ENST00000296930 DEFB132Q7Z7B7 95 aa23.17■■□□□ 1.3
NPM1-201ENST00000296930 USP35Q9P2H5 1018 aa23.16■■□□□ 1.3
NPM1-201ENST00000296930 CPSF1Q10570 1443 aaKnown RBP23.16■■□□□ 1.3
NPM1-201ENST00000296930 TTC21BQ7Z4L5 1316 aa23.16■■□□□ 1.3
NPM1-201ENST00000296930 LARP1Q6PKG0 1096 aaKnown RBP23.15■■□□□ 1.3
NPM1-201ENST00000296930 BARGINQ6ZT62 677 aa23.15■■□□□ 1.3
NPM1-201ENST00000296930 RGPD1P0DJD0 1748 aa23.14■■□□□ 1.3
NPM1-201ENST00000296930 TTC21AQ8NDW8 1320 aa23.14■■□□□ 1.3
NPM1-201ENST00000296930 COL5A2P05997 1499 aaPredicted RBP23.14■■□□□ 1.29
NPM1-201ENST00000296930 AATKQ6ZMQ8 1374 aa23.13■■□□□ 1.29
NPM1-201ENST00000296930 KTN1Q86UP2 1357 aaKnown RBP23.13■■□□□ 1.29
NPM1-201ENST00000296930 BAG6P46379 1132 aa23.13■■□□□ 1.29
NPM1-201ENST00000296930 FAM182BQ5T319 152 aa23.13■■□□□ 1.29
NPM1-201ENST00000296930 TCP11L2Q8N4U5 519 aa23.13■■□□□ 1.29
NPM1-201ENST00000296930 MON2Q7Z3U7 1717 aa23.12■■□□□ 1.29
NPM1-201ENST00000296930 ZBTB7CA1YPR0 619 aa23.12■■□□□ 1.29
NPM1-201ENST00000296930 THRAP3Q9Y2W1 955 aaKnown RBP23.12■■□□□ 1.29
NPM1-201ENST00000296930 KCNH5Q8NCM2 988 aa23.11■■□□□ 1.29
NPM1-201ENST00000296930 SRCAPQ6ZRS2 3230 aa23.09■■□□□ 1.29
NPM1-201ENST00000296930 COL18A1P39060 1754 aa23.09■■□□□ 1.29
NPM1-201ENST00000296930 FAM196AQ6ZSG2 479 aa23.09■■□□□ 1.29
NPM1-201ENST00000296930 CRB1P82279 1406 aa23.09■■□□□ 1.29
NPM1-201ENST00000296930 PDE3BQ13370 1112 aa23.07■■□□□ 1.28
NPM1-201ENST00000296930 PUS7Q96PZ0 661 aaKnown RBP23.06■■□□□ 1.28
NPM1-201ENST00000296930 TNS1Q9HBL0 1735 aaKnown RBP23.06■■□□□ 1.28
NPM1-201ENST00000296930 ARHGEF25Q86VW2 580 aa23.06■■□□□ 1.28
NPM1-201ENST00000296930 TMC1Q8TDI8 760 aa23.06■■□□□ 1.28
NPM1-201ENST00000296930 CD163L1Q9NR16 1453 aa23.05■■□□□ 1.28
NPM1-201ENST00000296930 PARP4Q9UKK3 1724 aaKnown RBP23.05■■□□□ 1.28
NPM1-201ENST00000296930 DISP2A7MBM2 1401 aa23.05■■□□□ 1.28
NPM1-201ENST00000296930 HDGFL2Q7Z4V5 671 aaPredicted RBP23.04■■□□□ 1.28
NPM1-201ENST00000296930 RGPD5Q99666 1765 aa23.03■■□□□ 1.28
NPM1-201ENST00000296930 NFAT5O94916 1531 aa23.03■■□□□ 1.28
NPM1-201ENST00000296930 USP54Q70EL1 1684 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms