RNA–Protein interactions for RNA: ENST00000295454.7

GABRB1-201, Transcript of gamma-aminobutyric acid type A receptor beta1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB1, Length 2,143 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB1-201ENST00000295454 ZRANB1Q9UGI0 708 aa23.89■■□□□ 1.41
GABRB1-201ENST00000295454 AMOTL2Q9Y2J4 779 aa23.89■■□□□ 1.41
GABRB1-201ENST00000295454 NUTM2FA1L443 756 aa23.88■■□□□ 1.41
GABRB1-201ENST00000295454 PLIN1O60240 522 aa23.88■■□□□ 1.41
GABRB1-201ENST00000295454 RUNDC1Q96C34 613 aa23.88■■□□□ 1.41
GABRB1-201ENST00000295454 ZNF142P52746 1687 aaPredicted RBP23.88■■□□□ 1.41
GABRB1-201ENST00000295454 NME9Q86XW9 330 aa23.87■■□□□ 1.41
GABRB1-201ENST00000295454 TBX22Q9Y458 520 aa23.87■■□□□ 1.41
GABRB1-201ENST00000295454 CCDC61Q9Y6R9 512 aa23.87■■□□□ 1.41
GABRB1-201ENST00000295454 NKTRP30414 1462 aaKnown RBP23.87■■□□□ 1.41
GABRB1-201ENST00000295454 U2AF1L5P0DN76 240 aaPredicted RBP23.86■■□□□ 1.41
GABRB1-201ENST00000295454 U2AF1Q01081 240 aaKnown RBP eCLIP23.86■■□□□ 1.41
GABRB1-201ENST00000295454 TRMT2AQ8IZ69 625 aaKnown RBP23.86■■□□□ 1.41
GABRB1-201ENST00000295454 NRKQ7Z2Y5 1582 aa23.86■■□□□ 1.41
GABRB1-201ENST00000295454 NEUROD2Q15784 382 aa23.86■■□□□ 1.41
GABRB1-201ENST00000295454 TCP11L2Q8N4U5 519 aa23.86■■□□□ 1.41
GABRB1-201ENST00000295454 RGPD8O14715 1765 aaPredicted RBP23.85■■□□□ 1.41
GABRB1-201ENST00000295454 PTCH1Q13635 1447 aa23.85■■□□□ 1.41
GABRB1-201ENST00000295454 EXOC6Q8TAG9 804 aa23.84■■□□□ 1.41
GABRB1-201ENST00000295454 WWC1Q8IX03 1113 aa23.84■■□□□ 1.41
GABRB1-201ENST00000295454 U2SURPO15042 1029 aaKnown RBP23.82■■□□□ 1.4
GABRB1-201ENST00000295454 PNPLA6Q8IY17 1366 aa23.81■■□□□ 1.4
GABRB1-201ENST00000295454 POLKQ9UBT6 870 aa23.8■■□□□ 1.4
GABRB1-201ENST00000295454 E9PSI1 815 aa23.78■■□□□ 1.4
GABRB1-201ENST00000295454 PHF23Q9BUL5 403 aaPredicted RBP23.78■■□□□ 1.4
GABRB1-201ENST00000295454 NGEFQ8N5V2 710 aa23.78■■□□□ 1.4
GABRB1-201ENST00000295454 PPM1GO15355 546 aaPredicted RBP23.77■■□□□ 1.4
GABRB1-201ENST00000295454 C20orf194Q5TEA3 1177 aa23.77■■□□□ 1.4
GABRB1-201ENST00000295454 CCDC136Q96JN2 1154 aa23.77■■□□□ 1.4
GABRB1-201ENST00000295454 EMILIN1Q9Y6C2 1016 aa23.77■■□□□ 1.4
GABRB1-201ENST00000295454 ACEP12821 1306 aa23.77■■□□□ 1.4
GABRB1-201ENST00000295454 KCNA6P17658 529 aa23.77■■□□□ 1.4
GABRB1-201ENST00000295454 PLEKHF1Q96S99 279 aa23.77■■□□□ 1.4
GABRB1-201ENST00000295454 DIAPH1O60610 1272 aaKnown RBP23.75■■□□□ 1.39
GABRB1-201ENST00000295454 CHD2O14647 1828 aaKnown RBP23.75■■□□□ 1.39
GABRB1-201ENST00000295454 LRRC7Q96NW7 1537 aa23.75■■□□□ 1.39
GABRB1-201ENST00000295454 CRBNQ96SW2 442 aa23.74■■□□□ 1.39
GABRB1-201ENST00000295454 PLEKHG3A1L390 1219 aa23.73■■□□□ 1.39
GABRB1-201ENST00000295454 SETD1BQ9UPS6 1966 aaKnown RBP23.73■■□□□ 1.39
GABRB1-201ENST00000295454 USP6P35125 1406 aa23.73■■□□□ 1.39
GABRB1-201ENST00000295454 COG3Q96JB2 828 aa23.72■■□□□ 1.39
GABRB1-201ENST00000295454 ZNF692Q9BU19 519 aaPredicted RBP23.72■■□□□ 1.39
GABRB1-201ENST00000295454 TTC21BQ7Z4L5 1316 aa23.72■■□□□ 1.39
GABRB1-201ENST00000295454 NALCNQ8IZF0 1738 aa23.71■■□□□ 1.39
GABRB1-201ENST00000295454 FMN2Q9NZ56 1722 aa23.71■■□□□ 1.39
GABRB1-201ENST00000295454 CDK12Q9NYV4 1490 aaPredicted RBP23.71■■□□□ 1.39
GABRB1-201ENST00000295454 RRS1Q15050 365 aaKnown RBP23.71■■□□□ 1.39
GABRB1-201ENST00000295454 PMFBP1Q8TBY8 1022 aa23.71■■□□□ 1.39
GABRB1-201ENST00000295454 AATKQ6ZMQ8 1374 aa23.7■■□□□ 1.38
GABRB1-201ENST00000295454 CCDC27Q2M243 656 aa23.7■■□□□ 1.38
GABRB1-201ENST00000295454 BCAR3O75815 825 aa23.69■■□□□ 1.38
GABRB1-201ENST00000295454 ANKLE2Q86XL3 938 aa23.69■■□□□ 1.38
GABRB1-201ENST00000295454 PIK3R4Q99570 1358 aa23.68■■□□□ 1.38
GABRB1-201ENST00000295454 OVOS2A0A0J9YW53 1432 aa23.68■■□□□ 1.38
GABRB1-201ENST00000295454 OVOS2Q6IE36 1432 aa23.68■■□□□ 1.38
GABRB1-201ENST00000295454 SSH2Q76I76 1423 aa23.67■■□□□ 1.38
GABRB1-201ENST00000295454 TMPOP42166 694 aaKnown RBP23.67■■□□□ 1.38
GABRB1-201ENST00000295454 WDR63Q8IWG1 891 aa23.67■■□□□ 1.38
GABRB1-201ENST00000295454 PEAK1Q9H792 1746 aa23.66■■□□□ 1.38
GABRB1-201ENST00000295454 MAPK8IP3Q9UPT6 1336 aa23.65■■□□□ 1.38
GABRB1-201ENST00000295454 RBM33Q96EV2 1170 aaKnown RBP23.65■■□□□ 1.38
GABRB1-201ENST00000295454 TRIM35Q9UPQ4 493 aa23.65■■□□□ 1.38
GABRB1-201ENST00000295454 RSPH6AQ9H0K4 717 aa23.65■■□□□ 1.38
GABRB1-201ENST00000295454 IL13P35225 146 aa23.64■■□□□ 1.37
GABRB1-201ENST00000295454 HMOX1P09601 288 aa23.63■■□□□ 1.37
GABRB1-201ENST00000295454 PIK3C2AO00443 1686 aa23.63■■□□□ 1.37
GABRB1-201ENST00000295454 PRKAR2BP31323 418 aa23.63■■□□□ 1.37
GABRB1-201ENST00000295454 NCBP3Q53F19 620 aaKnown RBP23.62■■□□□ 1.37
GABRB1-201ENST00000295454 RBM19Q9Y4C8 960 aaKnown RBP23.6■■□□□ 1.37
GABRB1-201ENST00000295454 NPHP4O75161 1426 aaPredicted RBP23.6■■□□□ 1.37
GABRB1-201ENST00000295454 ANKARQ7Z5J8 1434 aa23.6■■□□□ 1.37
GABRB1-201ENST00000295454 FCHSD2O94868 740 aa23.6■■□□□ 1.37
GABRB1-201ENST00000295454 MARF1Q9Y4F3 1742 aaKnown RBP23.6■■□□□ 1.37
GABRB1-201ENST00000295454 PHACTR3Q96KR7 559 aa23.59■■□□□ 1.37
GABRB1-201ENST00000295454 RIPK4P57078 832 aa23.59■■□□□ 1.37
GABRB1-201ENST00000295454 NGDNQ8NEJ9 315 aaKnown RBP23.59■■□□□ 1.37
GABRB1-201ENST00000295454 TSR2Q969E8 191 aaKnown RBP23.59■■□□□ 1.37
GABRB1-201ENST00000295454 DLG5Q8TDM6 1919 aa23.58■■□□□ 1.37
GABRB1-201ENST00000295454 SOX12O15370 315 aa23.58■■□□□ 1.37
GABRB1-201ENST00000295454 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.57■■□□□ 1.36
GABRB1-201ENST00000295454 USP31Q70CQ4 1352 aa23.57■■□□□ 1.36
GABRB1-201ENST00000295454 FANCIQ9NVI1 1328 aa23.56■■□□□ 1.36
GABRB1-201ENST00000295454 MYH16Q9H6N6 1097 aa23.55■■□□□ 1.36
GABRB1-201ENST00000295454 RARSP54136 660 aaKnown RBP23.54■■□□□ 1.36
GABRB1-201ENST00000295454 TTC21AQ8NDW8 1320 aa23.54■■□□□ 1.36
GABRB1-201ENST00000295454 BCL2L13Q9BXK5 485 aa23.53■■□□□ 1.36
GABRB1-201ENST00000295454 PNNQ9H307 717 aaKnown RBP23.53■■□□□ 1.36
GABRB1-201ENST00000295454 RGPD1P0DJD0 1748 aa23.53■■□□□ 1.36
GABRB1-201ENST00000295454 EIF4A2Q14240 407 aaKnown RBP23.53■■□□□ 1.36
GABRB1-201ENST00000295454 ADGRL3Q9HAR2 1447 aa23.51■■□□□ 1.35
GABRB1-201ENST00000295454 TNNQ9UQP3 1299 aa23.51■■□□□ 1.35
GABRB1-201ENST00000295454 HSP90AB2PQ58FF8 381 aa23.5■■□□□ 1.35
GABRB1-201ENST00000295454 AEBP1Q8IUX7 1158 aa23.5■■□□□ 1.35
GABRB1-201ENST00000295454 EXOSC9Q06265 439 aaKnown RBP23.5■■□□□ 1.35
GABRB1-201ENST00000295454 NFE2L2Q16236 605 aa23.5■■□□□ 1.35
GABRB1-201ENST00000295454 THUMPD2Q9BTF0 503 aaKnown RBP23.5■■□□□ 1.35
GABRB1-201ENST00000295454 NWD1Q149M9 1564 aa23.49■■□□□ 1.35
GABRB1-201ENST00000295454 NUTM2GQ5VZR2 741 aa23.49■■□□□ 1.35
GABRB1-201ENST00000295454 USP54Q70EL1 1684 aa23.49■■□□□ 1.35
GABRB1-201ENST00000295454 MAP3K19Q56UN5 1328 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms