RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 MCM10Q7L590 875 aa19.8■□□□□ 0.76
SMAD6-201ENST00000288840 TRIM6-TRIM34B2RNG4 842 aa19.79■□□□□ 0.76
SMAD6-201ENST00000288840 TRMT2AQ8IZ69 625 aaKnown RBP19.79■□□□□ 0.76
SMAD6-201ENST00000288840 ERVK-7P63135 1459 aa19.79■□□□□ 0.76
SMAD6-201ENST00000288840 CHD1LQ86WJ1 897 aa19.79■□□□□ 0.76
SMAD6-201ENST00000288840 PTPRTO14522 1441 aa19.79■□□□□ 0.76
SMAD6-201ENST00000288840 HDGFP51858 240 aaKnown RBP19.78■□□□□ 0.76
SMAD6-201ENST00000288840 A0A1W2PP64 1363 aa19.78■□□□□ 0.76
SMAD6-201ENST00000288840 MYO5CQ9NQX4 1742 aa19.78■□□□□ 0.76
SMAD6-201ENST00000288840 ATP7AQ04656 1500 aa19.78■□□□□ 0.76
SMAD6-201ENST00000288840 RTEL1-TNFRSF6BF6WH68 1400 aa19.77■□□□□ 0.76
SMAD6-201ENST00000288840 FCHSD2O94868 740 aa19.77■□□□□ 0.76
SMAD6-201ENST00000288840 LMOD3Q0VAK6 560 aa19.77■□□□□ 0.76
SMAD6-201ENST00000288840 KRT24Q2M2I5 525 aa19.77■□□□□ 0.76
SMAD6-201ENST00000288840 GBP4Q96PP9 640 aa19.76■□□□□ 0.75
SMAD6-201ENST00000288840 CHD1O14646 1710 aa19.76■□□□□ 0.75
SMAD6-201ENST00000288840 RILPL2Q969X0 211 aa19.76■□□□□ 0.75
SMAD6-201ENST00000288840 TRAK2O60296 914 aa19.75■□□□□ 0.75
SMAD6-201ENST00000288840 NUDT16Q96DE0 195 aaKnown RBP19.75■□□□□ 0.75
SMAD6-201ENST00000288840 TBC1D32Q96NH3 1257 aa19.75■□□□□ 0.75
SMAD6-201ENST00000288840 TRIM35Q9UPQ4 493 aa19.75■□□□□ 0.75
SMAD6-201ENST00000288840 ANKRD36BQ8N2N9 1353 aa19.75■□□□□ 0.75
SMAD6-201ENST00000288840 OS9Q13438 667 aaPredicted RBP19.75■□□□□ 0.75
SMAD6-201ENST00000288840 NFE2L2Q16236 605 aa19.75■□□□□ 0.75
SMAD6-201ENST00000288840 STK31Q9BXU1 1019 aa19.75■□□□□ 0.75
SMAD6-201ENST00000288840 ATAD2Q6PL18 1390 aa19.74■□□□□ 0.75
SMAD6-201ENST00000288840 SMARCA5O60264 1052 aaPredicted RBP19.74■□□□□ 0.75
SMAD6-201ENST00000288840 EIF2S2P20042 333 aaKnown RBP19.73■□□□□ 0.75
SMAD6-201ENST00000288840 API5Q9BZZ5 524 aaKnown RBP19.73■□□□□ 0.75
SMAD6-201ENST00000288840 POLKQ9UBT6 870 aa19.73■□□□□ 0.75
SMAD6-201ENST00000288840 NPATQ14207 1427 aa19.73■□□□□ 0.75
SMAD6-201ENST00000288840 NINLQ9Y2I6 1382 aa19.73■□□□□ 0.75
SMAD6-201ENST00000288840 AAMPQ13685 434 aa19.73■□□□□ 0.75
SMAD6-201ENST00000288840 NPC1L1Q9UHC9 1359 aa19.73■□□□□ 0.75
SMAD6-201ENST00000288840 TSPYL4Q9UJ04 414 aa19.72■□□□□ 0.75
SMAD6-201ENST00000288840 SLC4A2P04920 1241 aa19.72■□□□□ 0.75
SMAD6-201ENST00000288840 AEBP1Q8IUX7 1158 aa19.72■□□□□ 0.75
SMAD6-201ENST00000288840 RBM33Q96EV2 1170 aaKnown RBP19.71■□□□□ 0.75
SMAD6-201ENST00000288840 RBM42Q9BTD8 480 aaKnown RBP19.71■□□□□ 0.75
SMAD6-201ENST00000288840 MCM4P33991 863 aa19.71■□□□□ 0.75
SMAD6-201ENST00000288840 MBIPQ9NS73 344 aa19.71■□□□□ 0.75
SMAD6-201ENST00000288840 DDX49Q9Y6V7 483 aaKnown RBP19.71■□□□□ 0.75
SMAD6-201ENST00000288840 ABCC1P33527 1531 aa19.71■□□□□ 0.75
SMAD6-201ENST00000288840 FKBP5Q13451 457 aaPredicted RBP19.71■□□□□ 0.75
SMAD6-201ENST00000288840 PLCB2Q00722 1185 aa19.7■□□□□ 0.74
SMAD6-201ENST00000288840 C8orf58Q8NAV2 365 aa19.7■□□□□ 0.74
SMAD6-201ENST00000288840 ZNF518AQ6AHZ1 1483 aa19.7■□□□□ 0.74
SMAD6-201ENST00000288840 F6X3S4 739 aa19.69■□□□□ 0.74
SMAD6-201ENST00000288840 CCDC61Q9Y6R9 512 aa19.69■□□□□ 0.74
SMAD6-201ENST00000288840 CEBPAP49715 358 aaPredicted RBP19.68■□□□□ 0.74
SMAD6-201ENST00000288840 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.68■□□□□ 0.74
SMAD6-201ENST00000288840 POLR1AO95602 1720 aaPredicted RBP19.68■□□□□ 0.74
SMAD6-201ENST00000288840 CT47B1P0C2W7 299 aaPredicted RBP19.67■□□□□ 0.74
SMAD6-201ENST00000288840 CCDC27Q2M243 656 aa19.67■□□□□ 0.74
SMAD6-201ENST00000288840 TRHP20396 242 aaPredicted RBP19.67■□□□□ 0.74
SMAD6-201ENST00000288840 C16orf71Q8IYS4 520 aaPredicted RBP19.67■□□□□ 0.74
SMAD6-201ENST00000288840 IQGAP3Q86VI3 1631 aa19.67■□□□□ 0.74
SMAD6-201ENST00000288840 NLRP6P59044 892 aa19.66■□□□□ 0.74
SMAD6-201ENST00000288840 TAOK2Q9UL54 1235 aa19.66■□□□□ 0.74
SMAD6-201ENST00000288840 INSRP06213 1382 aa19.66■□□□□ 0.74
SMAD6-201ENST00000288840 CLTCL1P53675 1640 aa19.66■□□□□ 0.74
SMAD6-201ENST00000288840 ZCCHC11Q5TAX3 1644 aaKnown RBP19.66■□□□□ 0.74
SMAD6-201ENST00000288840 HAP1P54257 671 aaPredicted RBP19.66■□□□□ 0.74
SMAD6-201ENST00000288840 TSHZ3Q63HK5 1081 aa19.66■□□□□ 0.74
SMAD6-201ENST00000288840 EID1Q9Y6B2 187 aa19.66■□□□□ 0.74
SMAD6-201ENST00000288840 TRPM2O94759 1503 aa19.65■□□□□ 0.74
SMAD6-201ENST00000288840 WASLO00401 505 aaPredicted RBP19.65■□□□□ 0.74
SMAD6-201ENST00000288840 HMMRO75330 724 aa19.65■□□□□ 0.74
SMAD6-201ENST00000288840 DDX11L8A8MPP1 907 aa19.64■□□□□ 0.74
SMAD6-201ENST00000288840 HSP90AB2PQ58FF8 381 aa19.64■□□□□ 0.74
SMAD6-201ENST00000288840 MCTP1Q6DN14 999 aa19.64■□□□□ 0.74
SMAD6-201ENST00000288840 ZBTB40Q9NUA8 1239 aa19.64■□□□□ 0.74
SMAD6-201ENST00000288840 CDC45O75419 566 aa19.64■□□□□ 0.73
SMAD6-201ENST00000288840 EXOC6BQ9Y2D4 811 aa19.63■□□□□ 0.73
SMAD6-201ENST00000288840 UNC13BO14795 1591 aa19.63■□□□□ 0.73
SMAD6-201ENST00000288840 VAMP4O75379 141 aa19.62■□□□□ 0.73
SMAD6-201ENST00000288840 GCC1Q96CN9 775 aa19.62■□□□□ 0.73
SMAD6-201ENST00000288840 PANK2Q9BZ23 570 aa19.62■□□□□ 0.73
SMAD6-201ENST00000288840 ANO2Q9NQ90 1003 aa19.62■□□□□ 0.73
SMAD6-201ENST00000288840 TBC1D9Q6ZT07 1266 aa19.62■□□□□ 0.73
SMAD6-201ENST00000288840 PTMAP06454 111 aaKnown RBP19.61■□□□□ 0.73
SMAD6-201ENST00000288840 KCNJ4P48050 445 aa19.61■□□□□ 0.73
SMAD6-201ENST00000288840 ZFYVE16Q7Z3T8 1539 aa19.61■□□□□ 0.73
SMAD6-201ENST00000288840 HDAC1Q13547 482 aaPredicted RBP19.6■□□□□ 0.73
SMAD6-201ENST00000288840 KDM5AP29375 1690 aaKnown RBP19.6■□□□□ 0.73
SMAD6-201ENST00000288840 FOXO3O43524 673 aa19.6■□□□□ 0.73
SMAD6-201ENST00000288840 RSPH6AQ9H0K4 717 aa19.6■□□□□ 0.73
SMAD6-201ENST00000288840 USP19O94966 1318 aa19.59■□□□□ 0.73
SMAD6-201ENST00000288840 ST18O60284 1047 aa19.59■□□□□ 0.73
SMAD6-201ENST00000288840 MAP4K4O95819 1239 aaPredicted RBP19.59■□□□□ 0.73
SMAD6-201ENST00000288840 NUCB1Q02818 461 aa19.59■□□□□ 0.73
SMAD6-201ENST00000288840 ARID3AQ99856 593 aa19.59■□□□□ 0.73
SMAD6-201ENST00000288840 E9PCH4 1651 aa19.59■□□□□ 0.73
SMAD6-201ENST00000288840 ALDH1L2Q3SY69 923 aa19.59■□□□□ 0.73
SMAD6-201ENST00000288840 PODXL2Q9NZ53 605 aa19.59■□□□□ 0.73
SMAD6-201ENST00000288840 SYNMO15061 1565 aa19.59■□□□□ 0.73
SMAD6-201ENST00000288840 CCDC9Q9Y3X0 531 aaKnown RBP19.58■□□□□ 0.73
SMAD6-201ENST00000288840 USHBP1Q8N6Y0 703 aa19.58■□□□□ 0.72
SMAD6-201ENST00000288840 PLXNC1O60486 1568 aa19.58■□□□□ 0.72
SMAD6-201ENST00000288840 PLEKHF1Q96S99 279 aa19.58■□□□□ 0.72
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