RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 SLC12A5Q9H2X9 1139 aa19.72■□□□□ 0.75
SH3RF1-201ENST00000284637 CASKIN1Q8WXD9 1431 aa19.71■□□□□ 0.75
SH3RF1-201ENST00000284637 CIZ1Q9ULV3 898 aaPredicted RBP19.71■□□□□ 0.75
SH3RF1-201ENST00000284637 DHX16O60231 1041 aaKnown RBP19.71■□□□□ 0.75
SH3RF1-201ENST00000284637 NUTM2GQ5VZR2 741 aa19.71■□□□□ 0.75
SH3RF1-201ENST00000284637 NINLQ9Y2I6 1382 aa19.71■□□□□ 0.75
SH3RF1-201ENST00000284637 GAPVD1Q14C86 1478 aa19.71■□□□□ 0.75
SH3RF1-201ENST00000284637 FYCO1Q9BQS8 1478 aa19.71■□□□□ 0.75
SH3RF1-201ENST00000284637 ERICH2A1L162 156 aa19.71■□□□□ 0.75
SH3RF1-201ENST00000284637 PRDM10Q9NQV6 1147 aa19.7■□□□□ 0.74
SH3RF1-201ENST00000284637 OLFM4Q6UX06 510 aa19.7■□□□□ 0.74
SH3RF1-201ENST00000284637 CEBPZQ03701 1054 aaKnown RBP19.7■□□□□ 0.74
SH3RF1-201ENST00000284637 PSME1Q06323 249 aa19.7■□□□□ 0.74
SH3RF1-201ENST00000284637 ACBD3Q9H3P7 528 aa19.7■□□□□ 0.74
SH3RF1-201ENST00000284637 CFTRP13569 1480 aa19.7■□□□□ 0.74
SH3RF1-201ENST00000284637 KINO60870 393 aaKnown RBP19.69■□□□□ 0.74
SH3RF1-201ENST00000284637 NAP1L1P55209 391 aaKnown RBP19.69■□□□□ 0.74
SH3RF1-201ENST00000284637 SMC2O95347 1197 aa19.69■□□□□ 0.74
SH3RF1-201ENST00000284637 TTLL5Q6EMB2 1281 aa19.69■□□□□ 0.74
SH3RF1-201ENST00000284637 MVPQ14764 893 aaKnown RBP19.69■□□□□ 0.74
SH3RF1-201ENST00000284637 PDCL2Q8N4E4 241 aa19.69■□□□□ 0.74
SH3RF1-201ENST00000284637 RUFY1Q96T51 708 aa19.69■□□□□ 0.74
SH3RF1-201ENST00000284637 EVA1CP58658 441 aa19.68■□□□□ 0.74
SH3RF1-201ENST00000284637 ATF7IPQ6VMQ6 1270 aa19.68■□□□□ 0.74
SH3RF1-201ENST00000284637 PRM3Q9NNZ6 103 aa19.68■□□□□ 0.74
SH3RF1-201ENST00000284637 WDR97A6NE52 1622 aa19.68■□□□□ 0.74
SH3RF1-201ENST00000284637 VPS37DQ86XT2 251 aa19.67■□□□□ 0.74
SH3RF1-201ENST00000284637 PDCP20941 246 aa19.67■□□□□ 0.74
SH3RF1-201ENST00000284637 CWC22Q9HCG8 908 aaKnown RBP19.67■□□□□ 0.74
SH3RF1-201ENST00000284637 ATP2B1P20020 1258 aa19.66■□□□□ 0.74
SH3RF1-201ENST00000284637 AMOTL1Q8IY63 956 aa19.66■□□□□ 0.74
SH3RF1-201ENST00000284637 CCDC30Q5VVM6 783 aa19.66■□□□□ 0.74
SH3RF1-201ENST00000284637 SLC4A2P04920 1241 aa19.66■□□□□ 0.74
SH3RF1-201ENST00000284637 ZHX1Q9UKY1 873 aaPredicted RBP19.66■□□□□ 0.74
SH3RF1-201ENST00000284637 CHD1LQ86WJ1 897 aa19.65■□□□□ 0.74
SH3RF1-201ENST00000284637 DNAJC2Q99543 621 aaKnown RBP19.65■□□□□ 0.74
SH3RF1-201ENST00000284637 NOL10Q9BSC4 688 aaKnown RBP19.65■□□□□ 0.74
SH3RF1-201ENST00000284637 GNAI2P04899 355 aa19.65■□□□□ 0.74
SH3RF1-201ENST00000284637 SYTL4Q96C24 671 aaPredicted RBP19.65■□□□□ 0.74
SH3RF1-201ENST00000284637 AK7Q96M32 723 aa19.65■□□□□ 0.74
SH3RF1-201ENST00000284637 AFAP1Q8N556 730 aa19.64■□□□□ 0.73
SH3RF1-201ENST00000284637 CCDC112Q8NEF3 446 aa19.64■□□□□ 0.73
SH3RF1-201ENST00000284637 TSPYL1Q9H0U9 437 aa19.64■□□□□ 0.73
SH3RF1-201ENST00000284637 NLRP6P59044 892 aa19.64■□□□□ 0.73
SH3RF1-201ENST00000284637 CBX1P83916 185 aa19.63■□□□□ 0.73
SH3RF1-201ENST00000284637 WDR63Q8IWG1 891 aa19.63■□□□□ 0.73
SH3RF1-201ENST00000284637 RAPGEF4Q8WZA2 1011 aa19.63■□□□□ 0.73
SH3RF1-201ENST00000284637 CCDC192P0DO97 292 aa19.62■□□□□ 0.73
SH3RF1-201ENST00000284637 LEKR1Q6ZMV7 388 aa19.62■□□□□ 0.73
SH3RF1-201ENST00000284637 STK3Q13188 491 aa19.62■□□□□ 0.73
SH3RF1-201ENST00000284637 WDR33Q9C0J8 1336 aaKnown RBP19.61■□□□□ 0.73
SH3RF1-201ENST00000284637 MAP4K4O95819 1239 aaPredicted RBP19.61■□□□□ 0.73
SH3RF1-201ENST00000284637 C20orf194Q5TEA3 1177 aa19.61■□□□□ 0.73
SH3RF1-201ENST00000284637 FYB1O15117 783 aa19.6■□□□□ 0.73
SH3RF1-201ENST00000284637 CAGE1Q8TC20 777 aa19.6■□□□□ 0.73
SH3RF1-201ENST00000284637 KIAA1107Q9UPP5 1409 aa19.6■□□□□ 0.73
SH3RF1-201ENST00000284637 STK38Q15208 465 aa19.6■□□□□ 0.73
SH3RF1-201ENST00000284637 CYP46A1Q9Y6A2 500 aa19.6■□□□□ 0.73
SH3RF1-201ENST00000284637 LRRCC1Q9C099 1032 aa19.59■□□□□ 0.73
SH3RF1-201ENST00000284637 TNMDQ9H2S6 317 aa19.59■□□□□ 0.73
SH3RF1-201ENST00000284637 NLRP2Q9NX02 1062 aa19.59■□□□□ 0.73
SH3RF1-201ENST00000284637 DYNC1I1O14576 645 aa19.59■□□□□ 0.73
SH3RF1-201ENST00000284637 SLFN5Q08AF3 891 aa19.59■□□□□ 0.73
SH3RF1-201ENST00000284637 MAPK8IP2Q13387 824 aaPredicted RBP19.59■□□□□ 0.73
SH3RF1-201ENST00000284637 ZNF428Q96B54 188 aa19.59■□□□□ 0.73
SH3RF1-201ENST00000284637 CGNQ9P2M7 1197 aaKnown RBP19.59■□□□□ 0.73
SH3RF1-201ENST00000284637 BRPF1P55201 1214 aaPredicted RBP19.58■□□□□ 0.73
SH3RF1-201ENST00000284637 H0YHG0 523 aa19.58■□□□□ 0.73
SH3RF1-201ENST00000284637 RDXP35241 583 aaKnown RBP19.58■□□□□ 0.73
SH3RF1-201ENST00000284637 GAS2L2Q8NHY3 880 aa19.58■□□□□ 0.73
SH3RF1-201ENST00000284637 HFM1A2PYH4 1435 aa19.58■□□□□ 0.72
SH3RF1-201ENST00000284637 SULT6B1Q6IMI4 303 aa19.58■□□□□ 0.72
SH3RF1-201ENST00000284637 MTMR7Q9Y216 660 aa19.58■□□□□ 0.72
SH3RF1-201ENST00000284637 BBXQ8WY36 941 aaPredicted RBP19.57■□□□□ 0.72
SH3RF1-201ENST00000284637 PRAM1Q96QH2 718 aa19.57■□□□□ 0.72
SH3RF1-201ENST00000284637 CT47B1P0C2W7 299 aaPredicted RBP19.57■□□□□ 0.72
SH3RF1-201ENST00000284637 PRDM2Q13029 1718 aa19.57■□□□□ 0.72
SH3RF1-201ENST00000284637 LARP1BQ659C4 914 aaKnown RBP19.56■□□□□ 0.72
SH3RF1-201ENST00000284637 CALCOCO1Q9P1Z2 691 aa19.56■□□□□ 0.72
SH3RF1-201ENST00000284637 HIP1O00291 1037 aa19.56■□□□□ 0.72
SH3RF1-201ENST00000284637 OFD1O75665 1012 aa19.56■□□□□ 0.72
SH3RF1-201ENST00000284637 KRT85P78386 507 aa19.56■□□□□ 0.72
SH3RF1-201ENST00000284637 ZNF396Q96N95 335 aaPredicted RBP19.56■□□□□ 0.72
SH3RF1-201ENST00000284637 TCEAL9Q9UHQ7 104 aa19.56■□□□□ 0.72
SH3RF1-201ENST00000284637 XPCQ01831 940 aaPredicted RBP19.56■□□□□ 0.72
SH3RF1-201ENST00000284637 HDGFL1Q5TGJ6 251 aa19.55■□□□□ 0.72
SH3RF1-201ENST00000284637 CDR1P51861 262 aa19.55■□□□□ 0.72
SH3RF1-201ENST00000284637 BRMS1Q9HCU9 246 aa19.55■□□□□ 0.72
SH3RF1-201ENST00000284637 XBP1P17861 261 aa19.55■□□□□ 0.72
SH3RF1-201ENST00000284637 ME1P48163 572 aa19.55■□□□□ 0.72
SH3RF1-201ENST00000284637 TMEM57Q8N5G2 664 aa19.55■□□□□ 0.72
SH3RF1-201ENST00000284637 SYCE3A1L190 88 aa19.54■□□□□ 0.72
SH3RF1-201ENST00000284637 DEF6Q9H4E7 631 aa19.54■□□□□ 0.72
SH3RF1-201ENST00000284637 ERBINQ96RT1 1412 aa19.54■□□□□ 0.72
SH3RF1-201ENST00000284637 ERICH4A6NGS2 130 aa19.54■□□□□ 0.72
SH3RF1-201ENST00000284637 MCM5P33992 734 aa19.54■□□□□ 0.72
SH3RF1-201ENST00000284637 TRIM34Q9BYJ4 488 aa19.54■□□□□ 0.72
SH3RF1-201ENST00000284637 SERPINC1P01008 464 aa19.54■□□□□ 0.72
SH3RF1-201ENST00000284637 ERCC4Q92889 916 aaPredicted RBP19.54■□□□□ 0.72
SH3RF1-201ENST00000284637 CCT4P50991 539 aaKnown RBP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms