RNA–Protein interactions for RNA: ENST00000278460.11

C11orf49-201, Transcript of chromosome 11 open reading frame 49, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C11orf49, Length 1,645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-201ENST00000278460 STRCQ7RTU9 1775 aa25.93■■□□□ 1.74
C11orf49-201ENST00000278460 TTC21BQ7Z4L5 1316 aa25.92■■□□□ 1.74
C11orf49-201ENST00000278460 NME9Q86XW9 330 aa25.92■■□□□ 1.74
C11orf49-201ENST00000278460 AATKQ6ZMQ8 1374 aa25.89■■□□□ 1.74
C11orf49-201ENST00000278460 PDE3BQ13370 1112 aa25.89■■□□□ 1.74
C11orf49-201ENST00000278460 SENP3-EIF4A1A0A087X0R7 540 aa25.88■■□□□ 1.73
C11orf49-201ENST00000278460 COG3Q96JB2 828 aa25.88■■□□□ 1.73
C11orf49-201ENST00000278460 NUDCQ9Y266 331 aa25.88■■□□□ 1.73
C11orf49-201ENST00000278460 PNPLA6Q8IY17 1366 aa25.88■■□□□ 1.73
C11orf49-201ENST00000278460 TTC21AQ8NDW8 1320 aa25.87■■□□□ 1.73
C11orf49-201ENST00000278460 USP54Q70EL1 1684 aa25.87■■□□□ 1.73
C11orf49-201ENST00000278460 OVOS2A0A0J9YW53 1432 aa25.87■■□□□ 1.73
C11orf49-201ENST00000278460 OVOS2Q6IE36 1432 aa25.87■■□□□ 1.73
C11orf49-201ENST00000278460 PMFBP1Q8TBY8 1022 aa25.87■■□□□ 1.73
C11orf49-201ENST00000278460 HSPA2P54652 639 aa25.86■■□□□ 1.73
C11orf49-201ENST00000278460 NGDNQ8NEJ9 315 aaKnown RBP25.86■■□□□ 1.73
C11orf49-201ENST00000278460 PIK3C2AO00443 1686 aa25.85■■□□□ 1.73
C11orf49-201ENST00000278460 ZRANB1Q9UGI0 708 aa25.85■■□□□ 1.73
C11orf49-201ENST00000278460 PROSER2Q86WR7 435 aaPredicted RBP25.84■■□□□ 1.73
C11orf49-201ENST00000278460 NGEFQ8N5V2 710 aa25.84■■□□□ 1.73
C11orf49-201ENST00000278460 SALL2Q9Y467 1007 aaPredicted RBP25.84■■□□□ 1.73
C11orf49-201ENST00000278460 RBM33Q96EV2 1170 aaKnown RBP25.83■■□□□ 1.73
C11orf49-201ENST00000278460 POLKQ9UBT6 870 aa25.83■■□□□ 1.73
C11orf49-201ENST00000278460 CDK12Q9NYV4 1490 aaPredicted RBP25.83■■□□□ 1.73
C11orf49-201ENST00000278460 CCDC146Q8IYE0 955 aa25.82■■□□□ 1.72
C11orf49-201ENST00000278460 NCOA3Q9Y6Q9 1424 aa25.81■■□□□ 1.72
C11orf49-201ENST00000278460 MARF1Q9Y4F3 1742 aaKnown RBP25.81■■□□□ 1.72
C11orf49-201ENST00000278460 C14orf37Q86TY3 774 aa25.81■■□□□ 1.72
C11orf49-201ENST00000278460 USP31Q70CQ4 1352 aa25.8■■□□□ 1.72
C11orf49-201ENST00000278460 SUPT16HQ9Y5B9 1047 aaKnown RBP25.8■■□□□ 1.72
C11orf49-201ENST00000278460 IQSEC2Q5JU85 1478 aa25.79■■□□□ 1.72
C11orf49-201ENST00000278460 NEFLP07196 543 aa25.79■■□□□ 1.72
C11orf49-201ENST00000278460 PHF8Q9UPP1 1060 aa25.79■■□□□ 1.72
C11orf49-201ENST00000278460 LRRC7Q96NW7 1537 aa25.79■■□□□ 1.72
C11orf49-201ENST00000278460 ZNF521Q96K83 1311 aa25.78■■□□□ 1.72
C11orf49-201ENST00000278460 RUNDC1Q96C34 613 aa25.78■■□□□ 1.72
C11orf49-201ENST00000278460 KIF1AQ12756 1690 aa25.78■■□□□ 1.72
C11orf49-201ENST00000278460 APAF1O14727 1248 aa25.77■■□□□ 1.72
C11orf49-201ENST00000278460 DIAPH1O60610 1272 aaKnown RBP25.77■■□□□ 1.72
C11orf49-201ENST00000278460 XIRP1Q702N8 1843 aaKnown RBP25.77■■□□□ 1.72
C11orf49-201ENST00000278460 U2AF1L5P0DN76 240 aaPredicted RBP25.76■■□□□ 1.71
C11orf49-201ENST00000278460 U2AF1Q01081 240 aaKnown RBP eCLIP25.76■■□□□ 1.71
C11orf49-201ENST00000278460 FBLN1P23142 703 aa25.75■■□□□ 1.71
C11orf49-201ENST00000278460 DCCP43146 1447 aa25.74■■□□□ 1.71
C11orf49-201ENST00000278460 C19orf44Q9H6X5 657 aa25.74■■□□□ 1.71
C11orf49-201ENST00000278460 EMILIN1Q9Y6C2 1016 aa25.74■■□□□ 1.71
C11orf49-201ENST00000278460 TMEM94Q12767 1356 aa25.73■■□□□ 1.71
C11orf49-201ENST00000278460 PEAK1Q9H792 1746 aa25.72■■□□□ 1.71
C11orf49-201ENST00000278460 NCBP3Q53F19 620 aaKnown RBP25.72■■□□□ 1.71
C11orf49-201ENST00000278460 FKBP8Q14318 412 aa25.71■■□□□ 1.71
C11orf49-201ENST00000278460 CDCA7LQ96GN5 454 aa25.71■■□□□ 1.71
C11orf49-201ENST00000278460 U2SURPO15042 1029 aaKnown RBP25.7■■□□□ 1.71
C11orf49-201ENST00000278460 PPM1GO15355 546 aaPredicted RBP25.7■■□□□ 1.71
C11orf49-201ENST00000278460 ESCO1Q5FWF5 840 aa25.7■■□□□ 1.71
C11orf49-201ENST00000278460 C1orf167Q5SNV9 1468 aa25.69■■□□□ 1.7
C11orf49-201ENST00000278460 GOLGA2Q08379 1002 aa25.69■■□□□ 1.7
C11orf49-201ENST00000278460 RRS1Q15050 365 aaKnown RBP25.69■■□□□ 1.7
C11orf49-201ENST00000278460 TCP11L2Q8N4U5 519 aa25.68■■□□□ 1.7
C11orf49-201ENST00000278460 PNNQ9H307 717 aaKnown RBP25.68■■□□□ 1.7
C11orf49-201ENST00000278460 TRPM3Q9HCF6 1732 aaPredicted RBP25.67■■□□□ 1.7
C11orf49-201ENST00000278460 PLEKHF1Q96S99 279 aa25.66■■□□□ 1.7
C11orf49-201ENST00000278460 IL13P35225 146 aa25.66■■□□□ 1.7
C11orf49-201ENST00000278460 RNF123Q5XPI4 1314 aa25.66■■□□□ 1.7
C11orf49-201ENST00000278460 MST1RQ04912 1400 aa25.65■■□□□ 1.7
C11orf49-201ENST00000278460 NLRP6P59044 892 aa25.64■■□□□ 1.7
C11orf49-201ENST00000278460 CCDC27Q2M243 656 aa25.64■■□□□ 1.7
C11orf49-201ENST00000278460 PHF23Q9BUL5 403 aaPredicted RBP25.64■■□□□ 1.7
C11orf49-201ENST00000278460 FCHSD2O94868 740 aa25.63■■□□□ 1.69
C11orf49-201ENST00000278460 ATF3P18847 181 aa25.63■■□□□ 1.69
C11orf49-201ENST00000278460 PSME1Q06323 249 aa25.63■■□□□ 1.69
C11orf49-201ENST00000278460 ORAI2Q96SN7 254 aa25.63■■□□□ 1.69
C11orf49-201ENST00000278460 RGPD1P0DJD0 1748 aa25.63■■□□□ 1.69
C11orf49-201ENST00000278460 LTN1O94822 1766 aa25.63■■□□□ 1.69
C11orf49-201ENST00000278460 SLFN5Q08AF3 891 aa25.63■■□□□ 1.69
C11orf49-201ENST00000278460 WWC1Q8IX03 1113 aa25.62■■□□□ 1.69
C11orf49-201ENST00000278460 TRMT2AQ8IZ69 625 aaKnown RBP25.62■■□□□ 1.69
C11orf49-201ENST00000278460 ABTB2Q8N961 1025 aa25.62■■□□□ 1.69
C11orf49-201ENST00000278460 PAK3O75914 559 aaPredicted RBP25.61■■□□□ 1.69
C11orf49-201ENST00000278460 DUSP27Q5VZP5 1158 aa25.61■■□□□ 1.69
C11orf49-201ENST00000278460 SBNO1A3KN83 1393 aa25.6■■□□□ 1.69
C11orf49-201ENST00000278460 MSH6P52701 1360 aa25.6■■□□□ 1.69
C11orf49-201ENST00000278460 MAPK8IP3Q9UPT6 1336 aa25.6■■□□□ 1.69
C11orf49-201ENST00000278460 KIF24Q5T7B8 1368 aa25.6■■□□□ 1.69
C11orf49-201ENST00000278460 RSPH6AQ9H0K4 717 aa25.59■■□□□ 1.69
C11orf49-201ENST00000278460 MAP3K19Q56UN5 1328 aa25.59■■□□□ 1.69
C11orf49-201ENST00000278460 E9PSI1 815 aa25.59■■□□□ 1.69
C11orf49-201ENST00000278460 ERICH6BQ5W0A0 696 aa25.59■■□□□ 1.69
C11orf49-201ENST00000278460 CADPS2Q86UW7 1296 aa25.59■■□□□ 1.69
C11orf49-201ENST00000278460 RCAN3Q9UKA8 241 aa25.59■■□□□ 1.69
C11orf49-201ENST00000278460 FLT4P35916 1363 aa25.58■■□□□ 1.69
C11orf49-201ENST00000278460 RRP7AQ9Y3A4 280 aaKnown RBP25.58■■□□□ 1.69
C11orf49-201ENST00000278460 ALS2Q96Q42 1657 aa25.57■■□□□ 1.68
C11orf49-201ENST00000278460 DLG5Q8TDM6 1919 aa25.57■■□□□ 1.68
C11orf49-201ENST00000278460 WDR63Q8IWG1 891 aa25.56■■□□□ 1.68
C11orf49-201ENST00000278460 PHRF1Q9P1Y6 1649 aaKnown RBP25.56■■□□□ 1.68
C11orf49-201ENST00000278460 NFAT5O94916 1531 aa25.56■■□□□ 1.68
C11orf49-201ENST00000278460 FOXO3O43524 673 aa25.55■■□□□ 1.68
C11orf49-201ENST00000278460 TMPOP42166 694 aaKnown RBP25.55■■□□□ 1.68
C11orf49-201ENST00000278460 NEUROD2Q15784 382 aa25.55■■□□□ 1.68
C11orf49-201ENST00000278460 EIF4A2Q14240 407 aaKnown RBP25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms