RNA–Protein interactions for RNA: ENST00000272930.8

UBE2F-201, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2F, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-201ENST00000272930 WDR63Q8IWG1 891 aa26.41■■□□□ 1.82
UBE2F-201ENST00000272930 NUDT16Q96DE0 195 aaKnown RBP26.41■■□□□ 1.82
UBE2F-201ENST00000272930 C20orf194Q5TEA3 1177 aa26.39■■□□□ 1.82
UBE2F-201ENST00000272930 RRP7AQ9Y3A4 280 aaKnown RBP26.39■■□□□ 1.82
UBE2F-201ENST00000272930 CCDC61Q9Y6R9 512 aa26.39■■□□□ 1.82
UBE2F-201ENST00000272930 TOPAZ1Q8N9V7 1692 aa26.38■■□□□ 1.81
UBE2F-201ENST00000272930 EID1Q9Y6B2 187 aa26.38■■□□□ 1.81
UBE2F-201ENST00000272930 NEUROD2Q15784 382 aa26.38■■□□□ 1.81
UBE2F-201ENST00000272930 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.38■■□□□ 1.81
UBE2F-201ENST00000272930 PLEKHF1Q96S99 279 aa26.37■■□□□ 1.81
UBE2F-201ENST00000272930 TRHP20396 242 aaPredicted RBP26.36■■□□□ 1.81
UBE2F-201ENST00000272930 PTPRUQ92729 1446 aa26.36■■□□□ 1.81
UBE2F-201ENST00000272930 DIP2AQ14689 1571 aa26.35■■□□□ 1.81
UBE2F-201ENST00000272930 PRR36Q9H6K5 1346 aa26.34■■□□□ 1.81
UBE2F-201ENST00000272930 DIAPH1O60610 1272 aaKnown RBP26.34■■□□□ 1.81
UBE2F-201ENST00000272930 U2SURPO15042 1029 aaKnown RBP26.33■■□□□ 1.81
UBE2F-201ENST00000272930 POLKQ9UBT6 870 aa26.32■■□□□ 1.8
UBE2F-201ENST00000272930 THEMISQ8N1K5 641 aaPredicted RBP26.31■■□□□ 1.8
UBE2F-201ENST00000272930 TBX22Q9Y458 520 aa26.31■■□□□ 1.8
UBE2F-201ENST00000272930 NRKQ7Z2Y5 1582 aa26.31■■□□□ 1.8
UBE2F-201ENST00000272930 NCKAP5LQ9HCH0 1330 aa26.31■■□□□ 1.8
UBE2F-201ENST00000272930 AATKQ6ZMQ8 1374 aa26.3■■□□□ 1.8
UBE2F-201ENST00000272930 BCAR3O75815 825 aa26.3■■□□□ 1.8
UBE2F-201ENST00000272930 ZNF692Q9BU19 519 aaPredicted RBP26.3■■□□□ 1.8
UBE2F-201ENST00000272930 FANCIQ9NVI1 1328 aa26.29■■□□□ 1.8
UBE2F-201ENST00000272930 SLC26A8Q96RN1 970 aa26.29■■□□□ 1.8
UBE2F-201ENST00000272930 PTCH1Q13635 1447 aa26.29■■□□□ 1.8
UBE2F-201ENST00000272930 NME9Q86XW9 330 aa26.29■■□□□ 1.8
UBE2F-201ENST00000272930 CDK12Q9NYV4 1490 aaPredicted RBP26.28■■□□□ 1.8
UBE2F-201ENST00000272930 TMPOP42166 694 aaKnown RBP26.27■■□□□ 1.8
UBE2F-201ENST00000272930 PNNQ9H307 717 aaKnown RBP26.27■■□□□ 1.8
UBE2F-201ENST00000272930 MAPK8IP3Q9UPT6 1336 aa26.26■■□□□ 1.8
UBE2F-201ENST00000272930 LRRC7Q96NW7 1537 aa26.26■■□□□ 1.79
UBE2F-201ENST00000272930 XRN1Q8IZH2 1706 aaKnown RBP26.26■■□□□ 1.79
UBE2F-201ENST00000272930 CEP170BQ9Y4F5 1589 aaPredicted RBP26.26■■□□□ 1.79
UBE2F-201ENST00000272930 MYH16Q9H6N6 1097 aa26.25■■□□□ 1.79
UBE2F-201ENST00000272930 RIMS1Q86UR5 1692 aaKnown RBP26.24■■□□□ 1.79
UBE2F-201ENST00000272930 PLPPR3Q6T4P5 718 aa26.24■■□□□ 1.79
UBE2F-201ENST00000272930 FCHSD2O94868 740 aa26.24■■□□□ 1.79
UBE2F-201ENST00000272930 FBLN1P23142 703 aa26.24■■□□□ 1.79
UBE2F-201ENST00000272930 AMOTL2Q9Y2J4 779 aa26.24■■□□□ 1.79
UBE2F-201ENST00000272930 PLEKHG3A1L390 1219 aa26.23■■□□□ 1.79
UBE2F-201ENST00000272930 PDE3AQ14432 1141 aa26.22■■□□□ 1.79
UBE2F-201ENST00000272930 COG3Q96JB2 828 aa26.22■■□□□ 1.79
UBE2F-201ENST00000272930 ZRANB1Q9UGI0 708 aa26.22■■□□□ 1.79
UBE2F-201ENST00000272930 TRIM35Q9UPQ4 493 aa26.22■■□□□ 1.79
UBE2F-201ENST00000272930 KDM2BQ8NHM5 1336 aa26.22■■□□□ 1.79
UBE2F-201ENST00000272930 RARSP54136 660 aaKnown RBP26.21■■□□□ 1.79
UBE2F-201ENST00000272930 TCERG1O14776 1098 aaKnown RBP26.21■■□□□ 1.79
UBE2F-201ENST00000272930 EMILIN1Q9Y6C2 1016 aa26.2■■□□□ 1.78
UBE2F-201ENST00000272930 IL16Q14005 1332 aa26.2■■□□□ 1.78
UBE2F-201ENST00000272930 RSPH6AQ9H0K4 717 aa26.19■■□□□ 1.78
UBE2F-201ENST00000272930 NALCNQ8IZF0 1738 aa26.19■■□□□ 1.78
UBE2F-201ENST00000272930 PPM1GO15355 546 aaPredicted RBP26.19■■□□□ 1.78
UBE2F-201ENST00000272930 ACEP12821 1306 aa26.18■■□□□ 1.78
UBE2F-201ENST00000272930 USP6P35125 1406 aa26.18■■□□□ 1.78
UBE2F-201ENST00000272930 ZNF142P52746 1687 aaPredicted RBP26.18■■□□□ 1.78
UBE2F-201ENST00000272930 TTC21BQ7Z4L5 1316 aa26.17■■□□□ 1.78
UBE2F-201ENST00000272930 IL13P35225 146 aa26.17■■□□□ 1.78
UBE2F-201ENST00000272930 RGPD8O14715 1765 aaPredicted RBP26.16■■□□□ 1.78
UBE2F-201ENST00000272930 PIK3R4Q99570 1358 aa26.16■■□□□ 1.78
UBE2F-201ENST00000272930 CT47B1P0C2W7 299 aaPredicted RBP26.16■■□□□ 1.78
UBE2F-201ENST00000272930 OVOS2A0A0J9YW53 1432 aa26.16■■□□□ 1.78
UBE2F-201ENST00000272930 OVOS2Q6IE36 1432 aa26.16■■□□□ 1.78
UBE2F-201ENST00000272930 CENPQQ7L2Z9 268 aaPredicted RBP26.15■■□□□ 1.78
UBE2F-201ENST00000272930 ADAMTSL3P82987 1691 aa26.15■■□□□ 1.78
UBE2F-201ENST00000272930 RIPK4P57078 832 aa26.15■■□□□ 1.78
UBE2F-201ENST00000272930 SSH2Q76I76 1423 aa26.15■■□□□ 1.78
UBE2F-201ENST00000272930 MS4A1P11836 297 aa26.14■■□□□ 1.77
UBE2F-201ENST00000272930 PRKAR2BP31323 418 aa26.13■■□□□ 1.77
UBE2F-201ENST00000272930 CANXP27824 592 aaKnown RBP26.11■■□□□ 1.77
UBE2F-201ENST00000272930 NUTM2FA1L443 756 aa26.1■■□□□ 1.77
UBE2F-201ENST00000272930 RRS1Q15050 365 aaKnown RBP26.1■■□□□ 1.77
UBE2F-201ENST00000272930 TSR2Q969E8 191 aaKnown RBP26.1■■□□□ 1.77
UBE2F-201ENST00000272930 SETD1BQ9UPS6 1966 aaKnown RBP26.1■■□□□ 1.77
UBE2F-201ENST00000272930 NEFMP07197 916 aa26.09■■□□□ 1.77
UBE2F-201ENST00000272930 DLG5Q8TDM6 1919 aa26.09■■□□□ 1.77
UBE2F-201ENST00000272930 CHD2O14647 1828 aaKnown RBP26.08■■□□□ 1.77
UBE2F-201ENST00000272930 USP31Q70CQ4 1352 aa26.08■■□□□ 1.77
UBE2F-201ENST00000272930 FMN2Q9NZ56 1722 aa26.08■■□□□ 1.77
UBE2F-201ENST00000272930 PANK1Q8TE04 598 aa26.07■■□□□ 1.76
UBE2F-201ENST00000272930 FRAT1Q92837 279 aaPredicted RBP26.07■■□□□ 1.76
UBE2F-201ENST00000272930 HMOX1P09601 288 aa26.07■■□□□ 1.76
UBE2F-201ENST00000272930 NFE2L2Q16236 605 aa26.07■■□□□ 1.76
UBE2F-201ENST00000272930 ANKARQ7Z5J8 1434 aa26.07■■□□□ 1.76
UBE2F-201ENST00000272930 TTC21AQ8NDW8 1320 aa26.06■■□□□ 1.76
UBE2F-201ENST00000272930 MSH5O43196 834 aa26.06■■□□□ 1.76
UBE2F-201ENST00000272930 EXOSC9Q06265 439 aaKnown RBP26.06■■□□□ 1.76
UBE2F-201ENST00000272930 PHACTR3Q96KR7 559 aa26.05■■□□□ 1.76
UBE2F-201ENST00000272930 PEAK1Q9H792 1746 aa26.05■■□□□ 1.76
UBE2F-201ENST00000272930 KCNA6P17658 529 aa26.05■■□□□ 1.76
UBE2F-201ENST00000272930 AAMPQ13685 434 aa26.05■■□□□ 1.76
UBE2F-201ENST00000272930 COG6Q9Y2V7 657 aa26.05■■□□□ 1.76
UBE2F-201ENST00000272930 BCL2L13Q9BXK5 485 aa26.04■■□□□ 1.76
UBE2F-201ENST00000272930 CLUAP1Q96AJ1 413 aa26.03■■□□□ 1.76
UBE2F-201ENST00000272930 RGPD1P0DJD0 1748 aa26.02■■□□□ 1.76
UBE2F-201ENST00000272930 PIK3C2AO00443 1686 aa26.01■■□□□ 1.75
UBE2F-201ENST00000272930 RLBP1P12271 317 aa26■■□□□ 1.75
UBE2F-201ENST00000272930 PDE4AP27815 886 aa26■■□□□ 1.75
UBE2F-201ENST00000272930 ANKLE2Q86XL3 938 aa26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms