RNA–Protein interactions for RNA: ENST00000269844.4

PRDM15-201, Transcript of PR/SET domain 15, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM15, Length 4,881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-201ENST00000269844 SHTN1A0MZ66 631 aa17.18■□□□□ 0.34
PRDM15-201ENST00000269844 ZKSCAN1P17029 563 aaPredicted RBP17.18■□□□□ 0.34
PRDM15-201ENST00000269844 GABPB1Q06547 395 aaPredicted RBP17.18■□□□□ 0.34
PRDM15-201ENST00000269844 CARMIL2Q6F5E8 1435 aa17.18■□□□□ 0.34
PRDM15-201ENST00000269844 C20orf194Q5TEA3 1177 aa17.17■□□□□ 0.34
PRDM15-201ENST00000269844 TMX1Q9H3N1 280 aa17.17■□□□□ 0.34
PRDM15-201ENST00000269844 PAXBP1Q9Y5B6 917 aa17.17■□□□□ 0.34
PRDM15-201ENST00000269844 ELL2O00472 640 aaPredicted RBP17.17■□□□□ 0.34
PRDM15-201ENST00000269844 FAM193AP78312 1265 aa17.17■□□□□ 0.34
PRDM15-201ENST00000269844 DHX8Q14562 1220 aaKnown RBP17.17■□□□□ 0.34
PRDM15-201ENST00000269844 CCDC9Q9Y3X0 531 aaKnown RBP17.17■□□□□ 0.34
PRDM15-201ENST00000269844 SMARCA4P51532 1647 aa17.17■□□□□ 0.34
PRDM15-201ENST00000269844 CCDC18Q5T9S5 1454 aa17.17■□□□□ 0.34
PRDM15-201ENST00000269844 BAG4O95429 457 aaKnown RBP17.16■□□□□ 0.34
PRDM15-201ENST00000269844 U2AF2P26368 475 aaKnown RBP eCLIP17.16■□□□□ 0.34
PRDM15-201ENST00000269844 LRRCC1Q9C099 1032 aa17.16■□□□□ 0.34
PRDM15-201ENST00000269844 NOL7Q9UMY1 257 aaKnown RBP17.16■□□□□ 0.34
PRDM15-201ENST00000269844 WDR97A6NE52 1622 aa17.16■□□□□ 0.34
PRDM15-201ENST00000269844 NF2P35240 595 aa17.15■□□□□ 0.34
PRDM15-201ENST00000269844 EID1Q9Y6B2 187 aa17.15■□□□□ 0.34
PRDM15-201ENST00000269844 IVLP07476 585 aa17.15■□□□□ 0.34
PRDM15-201ENST00000269844 TBC1D32Q96NH3 1257 aa17.15■□□□□ 0.34
PRDM15-201ENST00000269844 RBM27Q9P2N5 1060 aaKnown RBP17.15■□□□□ 0.34
PRDM15-201ENST00000269844 KINO60870 393 aaKnown RBP17.15■□□□□ 0.34
PRDM15-201ENST00000269844 ANKRD30AQ9BXX3 1397 aa17.15■□□□□ 0.34
PRDM15-201ENST00000269844 GOLGA6L7A0A1B0GV03 622 aa17.14■□□□□ 0.33
PRDM15-201ENST00000269844 CARMIL1Q5VZK9 1371 aa17.14■□□□□ 0.33
PRDM15-201ENST00000269844 SLC26A8Q96RN1 970 aa17.14■□□□□ 0.33
PRDM15-201ENST00000269844 SMARCA2P51531 1590 aa17.13■□□□□ 0.33
PRDM15-201ENST00000269844 G3V3G9 751 aa17.13■□□□□ 0.33
PRDM15-201ENST00000269844 DCAF8Q5TAQ9 597 aa17.13■□□□□ 0.33
PRDM15-201ENST00000269844 RSPH14Q9UHP6 348 aa17.13■□□□□ 0.33
PRDM15-201ENST00000269844 URI1O94763 535 aaPredicted RBP17.13■□□□□ 0.33
PRDM15-201ENST00000269844 LRSAM1Q6UWE0 723 aa17.13■□□□□ 0.33
PRDM15-201ENST00000269844 TTC12Q9H892 705 aaPredicted RBP17.13■□□□□ 0.33
PRDM15-201ENST00000269844 A0A1B0GUL7 405 aa17.13■□□□□ 0.33
PRDM15-201ENST00000269844 ANKRD20A12PQ8NF67 263 aa17.13■□□□□ 0.33
PRDM15-201ENST00000269844 MYRIPQ8NFW9 859 aa17.13■□□□□ 0.33
PRDM15-201ENST00000269844 DRC1Q96MC2 740 aa17.13■□□□□ 0.33
PRDM15-201ENST00000269844 CCDC183Q5T5S1 534 aa17.12■□□□□ 0.33
PRDM15-201ENST00000269844 TRMT1Q9NXH9 659 aaKnown RBP17.12■□□□□ 0.33
PRDM15-201ENST00000269844 RASSF8Q8NHQ8 419 aa17.12■□□□□ 0.33
PRDM15-201ENST00000269844 NUP62CLQ9H1M0 184 aa17.12■□□□□ 0.33
PRDM15-201ENST00000269844 TERF2IPQ9NYB0 399 aa17.12■□□□□ 0.33
PRDM15-201ENST00000269844 CEP135Q66GS9 1140 aa17.12■□□□□ 0.33
PRDM15-201ENST00000269844 ZNF397Q8NF99 534 aaPredicted RBP17.11■□□□□ 0.33
PRDM15-201ENST00000269844 MYCBPQ99417 103 aaPredicted RBP17.11■□□□□ 0.33
PRDM15-201ENST00000269844 SARNPP82979 210 aaKnown RBP17.11■□□□□ 0.33
PRDM15-201ENST00000269844 C8orf34Q49A92 452 aa17.11■□□□□ 0.33
PRDM15-201ENST00000269844 GBP3Q9H0R5 595 aa17.11■□□□□ 0.33
PRDM15-201ENST00000269844 LRRFIP2Q9Y608 721 aaKnown RBP17.11■□□□□ 0.33
PRDM15-201ENST00000269844 RUFY2Q8WXA3 655 aa17.1■□□□□ 0.33
PRDM15-201ENST00000269844 UVSSAQ2YD98 709 aa17.1■□□□□ 0.33
PRDM15-201ENST00000269844 MICALL1Q8N3F8 863 aa17.1■□□□□ 0.33
PRDM15-201ENST00000269844 INCENPQ9NQS7 918 aa17.1■□□□□ 0.33
PRDM15-201ENST00000269844 OLFM4Q6UX06 510 aa17.1■□□□□ 0.33
PRDM15-201ENST00000269844 STK11IPQ8N1F8 1099 aa17.1■□□□□ 0.33
PRDM15-201ENST00000269844 TOP2AP11388 1531 aaKnown RBP17.1■□□□□ 0.33
PRDM15-201ENST00000269844 CHMP4CQ96CF2 233 aa17.09■□□□□ 0.33
PRDM15-201ENST00000269844 ATAD2BQ9ULI0 1458 aa17.09■□□□□ 0.33
PRDM15-201ENST00000269844 MAP3K11Q16584 847 aa17.09■□□□□ 0.33
PRDM15-201ENST00000269844 PCMTD1Q96MG8 357 aaPredicted RBP17.09■□□□□ 0.33
PRDM15-201ENST00000269844 CRACR2AQ9BSW2 395 aa17.09■□□□□ 0.33
PRDM15-201ENST00000269844 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.09■□□□□ 0.33
PRDM15-201ENST00000269844 HOOK1Q9UJC3 728 aaKnown RBP17.09■□□□□ 0.33
PRDM15-201ENST00000269844 V9GYY5 206 aaPredicted RBP17.09■□□□□ 0.33
PRDM15-201ENST00000269844 CLIP2Q9UDT6 1046 aa17.08■□□□□ 0.33
PRDM15-201ENST00000269844 NUP155O75694 1391 aa17.08■□□□□ 0.33
PRDM15-201ENST00000269844 PRIM1P49642 420 aaKnown RBP17.08■□□□□ 0.32
PRDM15-201ENST00000269844 GTF2E1P29083 439 aaPredicted RBP17.08■□□□□ 0.32
PRDM15-201ENST00000269844 JAKMIP3Q5VZ66 844 aa17.08■□□□□ 0.32
PRDM15-201ENST00000269844 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.08■□□□□ 0.32
PRDM15-201ENST00000269844 KRT85P78386 507 aa17.07■□□□□ 0.32
PRDM15-201ENST00000269844 EIF4G1Q04637 1599 aaKnown RBP17.07■□□□□ 0.32
PRDM15-201ENST00000269844 PRM3Q9NNZ6 103 aa17.07■□□□□ 0.32
PRDM15-201ENST00000269844 NINLQ9Y2I6 1382 aa17.07■□□□□ 0.32
PRDM15-201ENST00000269844 FOSBP53539 338 aa17.07■□□□□ 0.32
PRDM15-201ENST00000269844 KRBA2Q6ZNG9 492 aa17.07■□□□□ 0.32
PRDM15-201ENST00000269844 SERPINC1P01008 464 aa17.07■□□□□ 0.32
PRDM15-201ENST00000269844 PDCP20941 246 aa17.07■□□□□ 0.32
PRDM15-201ENST00000269844 RNF187Q5TA31 235 aaPredicted RBP17.07■□□□□ 0.32
PRDM15-201ENST00000269844 NGDNQ8NEJ9 315 aaKnown RBP17.06■□□□□ 0.32
PRDM15-201ENST00000269844 GOLGA6L10A6NI86 522 aa17.06■□□□□ 0.32
PRDM15-201ENST00000269844 SFPQP23246 707 aaKnown RBP eCLIP17.06■□□□□ 0.32
PRDM15-201ENST00000269844 SMARCC1Q92922 1105 aaPredicted RBP17.06■□□□□ 0.32
PRDM15-201ENST00000269844 GBP2P32456 591 aaPredicted RBP17.06■□□□□ 0.32
PRDM15-201ENST00000269844 CAPN2P17655 700 aa17.05■□□□□ 0.32
PRDM15-201ENST00000269844 MEX3CQ5U5Q3 659 aaKnown RBP17.05■□□□□ 0.32
PRDM15-201ENST00000269844 API5Q9BZZ5 524 aaKnown RBP17.05■□□□□ 0.32
PRDM15-201ENST00000269844 GBP6Q6ZN66 633 aa17.05■□□□□ 0.32
PRDM15-201ENST00000269844 CUX2O14529 1486 aa17.05■□□□□ 0.32
PRDM15-201ENST00000269844 NAP1L1P55209 391 aaKnown RBP17.04■□□□□ 0.32
PRDM15-201ENST00000269844 RUNDC1Q96C34 613 aa17.04■□□□□ 0.32
PRDM15-201ENST00000269844 GCC1Q96CN9 775 aa17.04■□□□□ 0.32
PRDM15-201ENST00000269844 NEMFO60524 1076 aa17.04■□□□□ 0.32
PRDM15-201ENST00000269844 TSC1Q92574 1164 aa17.04■□□□□ 0.32
PRDM15-201ENST00000269844 HCLS1P14317 486 aaPredicted RBP17.04■□□□□ 0.32
PRDM15-201ENST00000269844 RAPGEF2Q9Y4G8 1499 aa17.04■□□□□ 0.32
PRDM15-201ENST00000269844 CAMK4Q16566 473 aa17.04■□□□□ 0.32
PRDM15-201ENST00000269844 MICALCLQ6ZW33 695 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms