RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 RUNDC1Q96C34 613 aa16.8■□□□□ 0.28
CPSF6-201ENST00000266679 YTHDC2Q9H6S0 1430 aaKnown RBP16.8■□□□□ 0.28
CPSF6-201ENST00000266679 IPO9Q96P70 1041 aaKnown RBP16.8■□□□□ 0.28
CPSF6-201ENST00000266679 ANKRD26Q9UPS8 1709 aa16.79■□□□□ 0.28
CPSF6-201ENST00000266679 PRAM1Q96QH2 718 aa16.78■□□□□ 0.28
CPSF6-201ENST00000266679 BACH2Q9BYV9 841 aa16.78■□□□□ 0.28
CPSF6-201ENST00000266679 CENPQQ7L2Z9 268 aaPredicted RBP16.77■□□□□ 0.28
CPSF6-201ENST00000266679 TCP11L2Q8N4U5 519 aa16.77■□□□□ 0.28
CPSF6-201ENST00000266679 POGKQ9P215 609 aa16.77■□□□□ 0.28
CPSF6-201ENST00000266679 NINLQ9Y2I6 1382 aa16.77■□□□□ 0.28
CPSF6-201ENST00000266679 CHD2O14647 1828 aaKnown RBP16.77■□□□□ 0.27
CPSF6-201ENST00000266679 NWD1Q149M9 1564 aa16.76■□□□□ 0.27
CPSF6-201ENST00000266679 ABCC11Q96J66 1382 aa16.76■□□□□ 0.27
CPSF6-201ENST00000266679 TMEM94Q12767 1356 aa16.75■□□□□ 0.27
CPSF6-201ENST00000266679 ATAD2Q6PL18 1390 aa16.75■□□□□ 0.27
CPSF6-201ENST00000266679 ILDR2Q71H61 639 aa16.75■□□□□ 0.27
CPSF6-201ENST00000266679 PLEKHG1Q9ULL1 1385 aa16.75■□□□□ 0.27
CPSF6-201ENST00000266679 GGNBP2Q9H3C7 697 aa16.74■□□□□ 0.27
CPSF6-201ENST00000266679 KIF20BQ96Q89 1820 aa16.74■□□□□ 0.27
CPSF6-201ENST00000266679 ADGRB2O60241 1585 aa16.74■□□□□ 0.27
CPSF6-201ENST00000266679 U2AF1L5P0DN76 240 aaPredicted RBP16.73■□□□□ 0.27
CPSF6-201ENST00000266679 CANXP27824 592 aaKnown RBP16.73■□□□□ 0.27
CPSF6-201ENST00000266679 U2AF1Q01081 240 aaKnown RBP eCLIP16.73■□□□□ 0.271e-7■■■■■ 28
CPSF6-201ENST00000266679 ZBTB47Q9UFB7 747 aaPredicted RBP16.73■□□□□ 0.27
CPSF6-201ENST00000266679 CD163L1Q9NR16 1453 aa16.73■□□□□ 0.27
CPSF6-201ENST00000266679 SETD1AO15047 1707 aaKnown RBP16.72■□□□□ 0.27
CPSF6-201ENST00000266679 KCNA6P17658 529 aa16.72■□□□□ 0.27
CPSF6-201ENST00000266679 PROSER2Q86WR7 435 aaPredicted RBP16.71■□□□□ 0.27
CPSF6-201ENST00000266679 TERF2IPQ9NYB0 399 aa16.71■□□□□ 0.27
CPSF6-201ENST00000266679 ADAMTS13Q76LX8 1427 aa16.71■□□□□ 0.27
CPSF6-201ENST00000266679 MED1Q15648 1581 aaPredicted RBP16.7■□□□□ 0.26
CPSF6-201ENST00000266679 PHF23Q9BUL5 403 aaPredicted RBP16.7■□□□□ 0.26
CPSF6-201ENST00000266679 NRXN3Q9Y4C0 1643 aa16.7■□□□□ 0.26
CPSF6-201ENST00000266679 COL3A1P02461 1466 aaPredicted RBP16.7■□□□□ 0.26
CPSF6-201ENST00000266679 WDR63Q8IWG1 891 aa16.7■□□□□ 0.26
CPSF6-201ENST00000266679 CDK19Q9BWU1 502 aa16.69■□□□□ 0.26
CPSF6-201ENST00000266679 PANK1Q8TE04 598 aa16.69■□□□□ 0.26
CPSF6-201ENST00000266679 ROBO1Q9Y6N7 1651 aa16.68■□□□□ 0.26
CPSF6-201ENST00000266679 U2SURPO15042 1029 aaKnown RBP16.68■□□□□ 0.26
CPSF6-201ENST00000266679 FRAT1Q92837 279 aaPredicted RBP16.68■□□□□ 0.26
CPSF6-201ENST00000266679 FYB1O15117 783 aa16.68■□□□□ 0.26
CPSF6-201ENST00000266679 PDE3AQ14432 1141 aa16.68■□□□□ 0.26
CPSF6-201ENST00000266679 CCDC27Q2M243 656 aa16.68■□□□□ 0.26
CPSF6-201ENST00000266679 HDGFL2Q7Z4V5 671 aaPredicted RBP16.68■□□□□ 0.26
CPSF6-201ENST00000266679 DLC1Q96QB1 1528 aa16.67■□□□□ 0.26
CPSF6-201ENST00000266679 RARSP54136 660 aaKnown RBP16.67■□□□□ 0.26
CPSF6-201ENST00000266679 NBR1Q14596 966 aa16.67■□□□□ 0.26
CPSF6-201ENST00000266679 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.67■□□□□ 0.26
CPSF6-201ENST00000266679 COG6Q9Y2V7 657 aa16.67■□□□□ 0.26
CPSF6-201ENST00000266679 DIP2AQ14689 1571 aa16.67■□□□□ 0.26
CPSF6-201ENST00000266679 RGS3P49796 1198 aa16.66■□□□□ 0.26
CPSF6-201ENST00000266679 HDGFP51858 240 aaKnown RBP16.66■□□□□ 0.26
CPSF6-201ENST00000266679 CABP1Q9NZU7 370 aa16.65■□□□□ 0.26
CPSF6-201ENST00000266679 WAPLQ7Z5K2 1190 aa16.65■□□□□ 0.26
CPSF6-201ENST00000266679 BCL2L13Q9BXK5 485 aa16.65■□□□□ 0.26
CPSF6-201ENST00000266679 PTPRUQ92729 1446 aa16.64■□□□□ 0.25
CPSF6-201ENST00000266679 MYH16Q9H6N6 1097 aa16.64■□□□□ 0.25
CPSF6-201ENST00000266679 IGHDP01880 384 aa16.63■□□□□ 0.25
CPSF6-201ENST00000266679 CLUAP1Q96AJ1 413 aa16.63■□□□□ 0.25
CPSF6-201ENST00000266679 TNNQ9UQP3 1299 aa16.63■□□□□ 0.25
CPSF6-201ENST00000266679 TBX22Q9Y458 520 aa16.63■□□□□ 0.25
CPSF6-201ENST00000266679 MAPK8IP3Q9UPT6 1336 aa16.63■□□□□ 0.25
CPSF6-201ENST00000266679 PLEKHF1Q96S99 279 aa16.62■□□□□ 0.25
CPSF6-201ENST00000266679 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.62■□□□□ 0.25
CPSF6-201ENST00000266679 MSH6P52701 1360 aa16.62■□□□□ 0.25
CPSF6-201ENST00000266679 VIRMAQ69YN4 1812 aaKnown RBP16.61■□□□□ 0.25
CPSF6-201ENST00000266679 ATP7BP35670 1465 aa16.61■□□□□ 0.25
CPSF6-201ENST00000266679 FAM161AQ3B820 660 aa16.61■□□□□ 0.25
CPSF6-201ENST00000266679 XRN1Q8IZH2 1706 aaKnown RBP16.61■□□□□ 0.25
CPSF6-201ENST00000266679 NCBP3Q53F19 620 aaKnown RBP16.61■□□□□ 0.25
CPSF6-201ENST00000266679 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.61■□□□□ 0.25
CPSF6-201ENST00000266679 TSR2Q969E8 191 aaKnown RBP16.61■□□□□ 0.25
CPSF6-201ENST00000266679 TMPOP42166 694 aaKnown RBP16.6■□□□□ 0.25
CPSF6-201ENST00000266679 C8orf34Q49A92 452 aa16.6■□□□□ 0.25
CPSF6-201ENST00000266679 DIAPH1O60610 1272 aaKnown RBP16.6■□□□□ 0.25
CPSF6-201ENST00000266679 RLBP1P12271 317 aa16.6■□□□□ 0.25
CPSF6-201ENST00000266679 C14orf37Q86TY3 774 aa16.6■□□□□ 0.25
CPSF6-201ENST00000266679 METP08581 1390 aa16.58■□□□□ 0.25
CPSF6-201ENST00000266679 AMOTL2Q9Y2J4 779 aa16.58■□□□□ 0.25
CPSF6-201ENST00000266679 PHLPP1O60346 1717 aa16.58■□□□□ 0.25
CPSF6-201ENST00000266679 KNDC1Q76NI1 1749 aa16.58■□□□□ 0.25
CPSF6-201ENST00000266679 FAM135BQ49AJ0 1406 aa16.58■□□□□ 0.24
CPSF6-201ENST00000266679 MAP2P11137 1827 aaKnown RBP16.58■□□□□ 0.24
CPSF6-201ENST00000266679 TRIM35Q9UPQ4 493 aa16.58■□□□□ 0.24
CPSF6-201ENST00000266679 CDC42BPGQ6DT37 1551 aa16.57■□□□□ 0.24
CPSF6-201ENST00000266679 DDRGK1Q96HY6 314 aa16.57■□□□□ 0.24
CPSF6-201ENST00000266679 PNPLA6Q8IY17 1366 aa16.56■□□□□ 0.24
CPSF6-201ENST00000266679 FBLN1P23142 703 aa16.56■□□□□ 0.24
CPSF6-201ENST00000266679 PPIP5K1Q6PFW1 1433 aa16.56■□□□□ 0.24
CPSF6-201ENST00000266679 PIK3R4Q99570 1358 aa16.56■□□□□ 0.24
CPSF6-201ENST00000266679 PPM1GO15355 546 aaPredicted RBP16.55■□□□□ 0.24
CPSF6-201ENST00000266679 EXOSC9Q06265 439 aaKnown RBP16.55■□□□□ 0.24
CPSF6-201ENST00000266679 SLAIN2Q9P270 581 aa16.55■□□□□ 0.24
CPSF6-201ENST00000266679 LAS1LQ9Y4W2 734 aaKnown RBP16.55■□□□□ 0.24
CPSF6-201ENST00000266679 NALCNQ8IZF0 1738 aa16.55■□□□□ 0.24
CPSF6-201ENST00000266679 RIPK4P57078 832 aa16.54■□□□□ 0.24
CPSF6-201ENST00000266679 ITSN1Q15811 1721 aa16.54■□□□□ 0.24
CPSF6-201ENST00000266679 MON2Q7Z3U7 1717 aa16.54■□□□□ 0.24
CPSF6-201ENST00000266679 WASLO00401 505 aaPredicted RBP16.54■□□□□ 0.24
CPSF6-201ENST00000266679 SMC4Q9NTJ3 1288 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms