RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 BACH2Q9BYV9 841 aa14.59□□□□□ -0.07
MSH3-201ENST00000265081 DLG5Q8TDM6 1919 aa14.59□□□□□ -0.07
MSH3-201ENST00000265081 PLEKHG1Q9ULL1 1385 aa14.59□□□□□ -0.07
MSH3-201ENST00000265081 AAMPQ13685 434 aa14.58□□□□□ -0.07
MSH3-201ENST00000265081 TCP11L2Q8N4U5 519 aa14.58□□□□□ -0.07
MSH3-201ENST00000265081 IL16Q14005 1332 aa14.58□□□□□ -0.08
MSH3-201ENST00000265081 MARF1Q9Y4F3 1742 aaKnown RBP14.58□□□□□ -0.08
MSH3-201ENST00000265081 CT47B1P0C2W7 299 aaPredicted RBP14.57□□□□□ -0.08
MSH3-201ENST00000265081 FMN2Q9NZ56 1722 aa14.57□□□□□ -0.08
MSH3-201ENST00000265081 ZNF142P52746 1687 aaPredicted RBP14.55□□□□□ -0.08
MSH3-201ENST00000265081 MINK1Q8N4C8 1332 aaPredicted RBP14.55□□□□□ -0.08
MSH3-201ENST00000265081 PTCH1Q13635 1447 aa14.55□□□□□ -0.08
MSH3-201ENST00000265081 RARSP54136 660 aaKnown RBP14.55□□□□□ -0.08
MSH3-201ENST00000265081 BCAR3O75815 825 aa14.54□□□□□ -0.08
MSH3-201ENST00000265081 SRPK2P78362 688 aaKnown RBP14.54□□□□□ -0.08
MSH3-201ENST00000265081 PEAK1Q9H792 1746 aa14.54□□□□□ -0.08
MSH3-201ENST00000265081 STK26Q9P289 416 aa14.54□□□□□ -0.08
MSH3-201ENST00000265081 SSH2Q76I76 1423 aa14.53□□□□□ -0.08
MSH3-201ENST00000265081 PDE4AP27815 886 aa14.53□□□□□ -0.08
MSH3-201ENST00000265081 TRIM35Q9UPQ4 493 aa14.53□□□□□ -0.08
MSH3-201ENST00000265081 HDGFL2Q7Z4V5 671 aaPredicted RBP14.53□□□□□ -0.08
MSH3-201ENST00000265081 WASLO00401 505 aaPredicted RBP14.52□□□□□ -0.08
MSH3-201ENST00000265081 POGKQ9P215 609 aa14.52□□□□□ -0.08
MSH3-201ENST00000265081 IPO9Q96P70 1041 aaKnown RBP14.52□□□□□ -0.08
MSH3-201ENST00000265081 CABP1Q9NZU7 370 aa14.51□□□□□ -0.09
MSH3-201ENST00000265081 OVOS2A0A0J9YW53 1432 aa14.51□□□□□ -0.09
MSH3-201ENST00000265081 OVOS2Q6IE36 1432 aa14.51□□□□□ -0.09
MSH3-201ENST00000265081 PTPRUQ92729 1446 aa14.51□□□□□ -0.09
MSH3-201ENST00000265081 ROBO2Q9HCK4 1378 aa14.5□□□□□ -0.09
MSH3-201ENST00000265081 GGNBP2Q9H3C7 697 aa14.5□□□□□ -0.09
MSH3-201ENST00000265081 TMPOP42166 694 aaKnown RBP14.49□□□□□ -0.09
MSH3-201ENST00000265081 WAPLQ7Z5K2 1190 aa14.49□□□□□ -0.09
MSH3-201ENST00000265081 MYH16Q9H6N6 1097 aa14.49□□□□□ -0.09
MSH3-201ENST00000265081 SAFB2Q14151 953 aaKnown RBP eCLIP14.49□□□□□ -0.09
MSH3-201ENST00000265081 BRPF1P55201 1214 aaPredicted RBP14.48□□□□□ -0.09
MSH3-201ENST00000265081 TNNT2P45379 298 aaPredicted RBP14.48□□□□□ -0.09
MSH3-201ENST00000265081 RSPH6AQ9H0K4 717 aa14.48□□□□□ -0.09
MSH3-201ENST00000265081 POLKQ9UBT6 870 aa14.48□□□□□ -0.09
MSH3-201ENST00000265081 HDGFP51858 240 aaKnown RBP14.48□□□□□ -0.09
MSH3-201ENST00000265081 FCHSD2O94868 740 aa14.47□□□□□ -0.09
MSH3-201ENST00000265081 NOP58Q9Y2X3 529 aaKnown RBP14.47□□□□□ -0.09
MSH3-201ENST00000265081 PIK3C2AO00443 1686 aa14.47□□□□□ -0.09
MSH3-201ENST00000265081 RGPD8O14715 1765 aaPredicted RBP14.47□□□□□ -0.09
MSH3-201ENST00000265081 USP31Q70CQ4 1352 aa14.47□□□□□ -0.09
MSH3-201ENST00000265081 LRRC37A3O60309 1634 aa14.46□□□□□ -0.09
MSH3-201ENST00000265081 C8orf34Q49A92 452 aa14.46□□□□□ -0.09
MSH3-201ENST00000265081 PNNQ9H307 717 aaKnown RBP14.46□□□□□ -0.09
MSH3-201ENST00000265081 STAG3Q9UJ98 1225 aa14.46□□□□□ -0.09
MSH3-201ENST00000265081 PRR36Q9H6K5 1346 aa14.46□□□□□ -0.1
MSH3-201ENST00000265081 U2AF1L5P0DN76 240 aaPredicted RBP14.46□□□□□ -0.1
MSH3-201ENST00000265081 U2AF1Q01081 240 aaKnown RBP eCLIP14.46□□□□□ -0.1
MSH3-201ENST00000265081 CLUAP1Q96AJ1 413 aa14.46□□□□□ -0.1
MSH3-201ENST00000265081 DIAPH1O60610 1272 aaKnown RBP14.45□□□□□ -0.1
MSH3-201ENST00000265081 CHD2O14647 1828 aaKnown RBP14.45□□□□□ -0.1
MSH3-201ENST00000265081 RRP7AQ9Y3A4 280 aaKnown RBP14.45□□□□□ -0.1
MSH3-201ENST00000265081 IL13P35225 146 aa14.44□□□□□ -0.1
MSH3-201ENST00000265081 PIK3R4Q99570 1358 aa14.44□□□□□ -0.1
MSH3-201ENST00000265081 USP6P35125 1406 aa14.44□□□□□ -0.1
MSH3-201ENST00000265081 IGHDP01880 384 aa14.44□□□□□ -0.1
MSH3-201ENST00000265081 ANP32AP39687 249 aaKnown RBP14.44□□□□□ -0.1
MSH3-201ENST00000265081 CEP170BQ9Y4F5 1589 aaPredicted RBP14.43□□□□□ -0.1
MSH3-201ENST00000265081 PLEKHG3A1L390 1219 aa14.43□□□□□ -0.1
MSH3-201ENST00000265081 PHRF1Q9P1Y6 1649 aaKnown RBP14.43□□□□□ -0.1
MSH3-201ENST00000265081 NUDT16Q96DE0 195 aaKnown RBP14.43□□□□□ -0.1
MSH3-201ENST00000265081 N4BP2Q86UW6 1770 aaPredicted RBP14.42□□□□□ -0.1
MSH3-201ENST00000265081 PAK3O75914 559 aaPredicted RBP14.42□□□□□ -0.1
MSH3-201ENST00000265081 RLBP1P12271 317 aa14.42□□□□□ -0.1
MSH3-201ENST00000265081 CCDC61Q9Y6R9 512 aa14.42□□□□□ -0.1
MSH3-201ENST00000265081 ZNF692Q9BU19 519 aaPredicted RBP14.42□□□□□ -0.1
MSH3-201ENST00000265081 ADAMTSL3P82987 1691 aa14.41□□□□□ -0.1
MSH3-201ENST00000265081 ZNF853P0CG23 659 aa14.41□□□□□ -0.1
MSH3-201ENST00000265081 ANKARQ7Z5J8 1434 aa14.41□□□□□ -0.1
MSH3-201ENST00000265081 FAM161AQ3B820 660 aa14.41□□□□□ -0.1
MSH3-201ENST00000265081 ZNF428Q96B54 188 aa14.41□□□□□ -0.1
MSH3-201ENST00000265081 LTKP29376 864 aa14.4□□□□□ -0.1
MSH3-201ENST00000265081 ALDH1L2Q3SY69 923 aa14.4□□□□□ -0.1
MSH3-201ENST00000265081 PANK1Q8TE04 598 aa14.4□□□□□ -0.1
MSH3-201ENST00000265081 SKAP1Q86WV1 359 aa14.39□□□□□ -0.11
MSH3-201ENST00000265081 MVPQ14764 893 aaKnown RBP14.39□□□□□ -0.11
MSH3-201ENST00000265081 TXNDC2Q86VQ3 553 aa14.39□□□□□ -0.11
MSH3-201ENST00000265081 MLECQ14165 292 aa14.38□□□□□ -0.11
MSH3-201ENST00000265081 MAPK8IP3Q9UPT6 1336 aa14.38□□□□□ -0.11
MSH3-201ENST00000265081 PMFBP1Q8TBY8 1022 aa14.38□□□□□ -0.11
MSH3-201ENST00000265081 NFE2L2Q16236 605 aa14.37□□□□□ -0.11
MSH3-201ENST00000265081 TBX22Q9Y458 520 aa14.37□□□□□ -0.11
MSH3-201ENST00000265081 NME9Q86XW9 330 aa14.37□□□□□ -0.11
MSH3-201ENST00000265081 COG6Q9Y2V7 657 aa14.37□□□□□ -0.11
MSH3-201ENST00000265081 PCDHB15Q9Y5E8 787 aa14.36□□□□□ -0.11
MSH3-201ENST00000265081 NWD1Q149M9 1564 aa14.36□□□□□ -0.11
MSH3-201ENST00000265081 TNNQ9UQP3 1299 aa14.36□□□□□ -0.11
MSH3-201ENST00000265081 RIPK4P57078 832 aa14.36□□□□□ -0.11
MSH3-201ENST00000265081 NEUROD2Q15784 382 aa14.36□□□□□ -0.11
MSH3-201ENST00000265081 ZKSCAN2Q63HK3 967 aa14.36□□□□□ -0.11
MSH3-201ENST00000265081 USP19O94966 1318 aa14.35□□□□□ -0.11
MSH3-201ENST00000265081 EXOSC9Q06265 439 aaKnown RBP14.35□□□□□ -0.11
MSH3-201ENST00000265081 HDAC1Q13547 482 aaPredicted RBP14.35□□□□□ -0.11
MSH3-201ENST00000265081 TTC21BQ7Z4L5 1316 aa14.35□□□□□ -0.11
MSH3-201ENST00000265081 TSR2Q969E8 191 aaKnown RBP14.35□□□□□ -0.11
MSH3-201ENST00000265081 ESF1Q9H501 851 aaKnown RBP14.35□□□□□ -0.11
MSH3-201ENST00000265081 U2SURPO15042 1029 aaKnown RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms