RNA–Protein interactions for RNA: ENST00000262717.8

CDH20-201, Transcript of cadherin 20, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDH20, Length 3,882 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20-201ENST00000262717 NGDNQ8NEJ9 315 aaKnown RBP18.4■□□□□ 0.54
CDH20-201ENST00000262717 ATAD2Q6PL18 1390 aa18.4■□□□□ 0.54
CDH20-201ENST00000262717 SULT6B1Q6IMI4 303 aa18.4■□□□□ 0.54
CDH20-201ENST00000262717 TWISTNBQ3B726 338 aaPredicted RBP18.39■□□□□ 0.53
CDH20-201ENST00000262717 TSPYL6Q8N831 410 aa18.39■□□□□ 0.53
CDH20-201ENST00000262717 TRIM35Q9UPQ4 493 aa18.39■□□□□ 0.53
CDH20-201ENST00000262717 SPHKAPQ2M3C7 1700 aa18.38■□□□□ 0.53
CDH20-201ENST00000262717 RTF1Q92541 710 aaKnown RBP18.38■□□□□ 0.53
CDH20-201ENST00000262717 CALD1Q05682 793 aaKnown RBP18.38■□□□□ 0.53
CDH20-201ENST00000262717 NUDT16Q96DE0 195 aaKnown RBP18.38■□□□□ 0.53
CDH20-201ENST00000262717 YEATS2Q9ULM3 1422 aa18.38■□□□□ 0.53
CDH20-201ENST00000262717 INSRP06213 1382 aa18.37■□□□□ 0.53
CDH20-201ENST00000262717 TBC1D2Q9BYX2 928 aa18.37■□□□□ 0.53
CDH20-201ENST00000262717 POLKQ9UBT6 870 aa18.37■□□□□ 0.53
CDH20-201ENST00000262717 GNAI1P63096 354 aa18.36■□□□□ 0.53
CDH20-201ENST00000262717 FCHSD2O94868 740 aa18.36■□□□□ 0.53
CDH20-201ENST00000262717 AMPHP49418 695 aa18.36■□□□□ 0.53
CDH20-201ENST00000262717 MCM10Q7L590 875 aa18.36■□□□□ 0.53
CDH20-201ENST00000262717 POGZQ7Z3K3 1410 aa18.36■□□□□ 0.53
CDH20-201ENST00000262717 HDGFP51858 240 aaKnown RBP18.35■□□□□ 0.53
CDH20-201ENST00000262717 KRT24Q2M2I5 525 aa18.35■□□□□ 0.53
CDH20-201ENST00000262717 TET3O43151 1660 aa18.35■□□□□ 0.53
CDH20-201ENST00000262717 NFE2L2Q16236 605 aa18.35■□□□□ 0.53
CDH20-201ENST00000262717 NINLQ9Y2I6 1382 aa18.35■□□□□ 0.53
CDH20-201ENST00000262717 CEBPAP49715 358 aaPredicted RBP18.34■□□□□ 0.53
CDH20-201ENST00000262717 NOL8Q76FK4 1167 aaKnown RBP18.34■□□□□ 0.53
CDH20-201ENST00000262717 AEBP1Q8IUX7 1158 aa18.33■□□□□ 0.53
CDH20-201ENST00000262717 ABCA6Q8N139 1617 aa18.33■□□□□ 0.53
CDH20-201ENST00000262717 FOXD4L5Q5VV16 416 aaPredicted RBP18.33■□□□□ 0.52
CDH20-201ENST00000262717 FOXD4L4Q8WXT5 416 aaPredicted RBP18.33■□□□□ 0.52
CDH20-201ENST00000262717 MAP3K4Q9Y6R4 1608 aa18.33■□□□□ 0.52
CDH20-201ENST00000262717 SHROOM2Q13796 1616 aa18.33■□□□□ 0.52
CDH20-201ENST00000262717 CCDC27Q2M243 656 aa18.32■□□□□ 0.52
CDH20-201ENST00000262717 CHD1LQ86WJ1 897 aa18.32■□□□□ 0.52
CDH20-201ENST00000262717 LMOD3Q0VAK6 560 aa18.31■□□□□ 0.52
CDH20-201ENST00000262717 RBM33Q96EV2 1170 aaKnown RBP18.31■□□□□ 0.52
CDH20-201ENST00000262717 EFCAB6Q5THR3 1501 aa18.31■□□□□ 0.52
CDH20-201ENST00000262717 MYOM2P54296 1465 aa18.31■□□□□ 0.52
CDH20-201ENST00000262717 WASLO00401 505 aaPredicted RBP18.31■□□□□ 0.52
CDH20-201ENST00000262717 ZNF428Q96B54 188 aa18.31■□□□□ 0.52
CDH20-201ENST00000262717 CHMP4BQ9H444 224 aaKnown RBP18.31■□□□□ 0.52
CDH20-201ENST00000262717 MBIPQ9NS73 344 aa18.31■□□□□ 0.52
CDH20-201ENST00000262717 CCDC61Q9Y6R9 512 aa18.31■□□□□ 0.52
CDH20-201ENST00000262717 KIF1BO60333 1816 aa18.3■□□□□ 0.52
CDH20-201ENST00000262717 C8orf58Q8NAV2 365 aa18.3■□□□□ 0.52
CDH20-201ENST00000262717 TBC1D32Q96NH3 1257 aa18.3■□□□□ 0.52
CDH20-201ENST00000262717 SBNO2Q9Y2G9 1366 aa18.29■□□□□ 0.52
CDH20-201ENST00000262717 RNF17Q9BXT8 1623 aaKnown RBP18.29■□□□□ 0.52
CDH20-201ENST00000262717 CLASP1Q7Z460 1538 aa18.29■□□□□ 0.52
CDH20-201ENST00000262717 YTHDC2Q9H6S0 1430 aaKnown RBP18.29■□□□□ 0.52
CDH20-201ENST00000262717 AAMPQ13685 434 aa18.28■□□□□ 0.52
CDH20-201ENST00000262717 NSD2O96028 1365 aa18.28■□□□□ 0.52
CDH20-201ENST00000262717 SMARCA5O60264 1052 aaPredicted RBP18.27■□□□□ 0.51
CDH20-201ENST00000262717 CT47B1P0C2W7 299 aaPredicted RBP18.27■□□□□ 0.51
CDH20-201ENST00000262717 CEP152O94986 1710 aa18.27■□□□□ 0.51
CDH20-201ENST00000262717 LAMC1P11047 1609 aa18.27■□□□□ 0.51
CDH20-201ENST00000262717 TRHP20396 242 aaPredicted RBP18.26■□□□□ 0.51
CDH20-201ENST00000262717 API5Q9BZZ5 524 aaKnown RBP18.26■□□□□ 0.51
CDH20-201ENST00000262717 TSPYL4Q9UJ04 414 aa18.26■□□□□ 0.51
CDH20-201ENST00000262717 PLEKHF1Q96S99 279 aa18.26■□□□□ 0.51
CDH20-201ENST00000262717 ANO8Q9HCE9 1232 aaPredicted RBP18.26■□□□□ 0.51
CDH20-201ENST00000262717 IQGAP1P46940 1657 aa18.26■□□□□ 0.51
CDH20-201ENST00000262717 HSP90AB2PQ58FF8 381 aa18.25■□□□□ 0.51
CDH20-201ENST00000262717 RSPH6AQ9H0K4 717 aa18.25■□□□□ 0.51
CDH20-201ENST00000262717 CHMP5Q9NZZ3 219 aa18.25■□□□□ 0.51
CDH20-201ENST00000262717 EID1Q9Y6B2 187 aa18.25■□□□□ 0.51
CDH20-201ENST00000262717 GOLGA6L3A6NEY3 463 aa18.25■□□□□ 0.51
CDH20-201ENST00000262717 SLC4A2P04920 1241 aa18.25■□□□□ 0.51
CDH20-201ENST00000262717 FOXD4L6Q3SYB3 417 aaPredicted RBP18.25■□□□□ 0.51
CDH20-201ENST00000262717 FOXD4L3Q6VB84 417 aaPredicted RBP18.25■□□□□ 0.51
CDH20-201ENST00000262717 PPRC1Q5VV67 1664 aaKnown RBP18.25■□□□□ 0.51
CDH20-201ENST00000262717 F6X3S4 739 aa18.24■□□□□ 0.51
CDH20-201ENST00000262717 CASC1Q6TDU7 716 aa18.24■□□□□ 0.51
CDH20-201ENST00000262717 STK31Q9BXU1 1019 aa18.24■□□□□ 0.51
CDH20-201ENST00000262717 ZBTB40Q9NUA8 1239 aa18.24■□□□□ 0.51
CDH20-201ENST00000262717 TRIM6-TRIM34B2RNG4 842 aa18.24■□□□□ 0.51
CDH20-201ENST00000262717 ABCC11Q96J66 1382 aa18.24■□□□□ 0.51
CDH20-201ENST00000262717 EIF2S2P20042 333 aaKnown RBP18.24■□□□□ 0.51
CDH20-201ENST00000262717 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.24■□□□□ 0.51
CDH20-201ENST00000262717 NLRP6P59044 892 aa18.23■□□□□ 0.51
CDH20-201ENST00000262717 RBM42Q9BTD8 480 aaKnown RBP18.23■□□□□ 0.51
CDH20-201ENST00000262717 VAMP4O75379 141 aa18.23■□□□□ 0.51
CDH20-201ENST00000262717 USP19O94966 1318 aa18.22■□□□□ 0.51
CDH20-201ENST00000262717 FKBP5Q13451 457 aaPredicted RBP18.22■□□□□ 0.51
CDH20-201ENST00000262717 C16orf71Q8IYS4 520 aaPredicted RBP18.22■□□□□ 0.51
CDH20-201ENST00000262717 GOLGA6L22H0YM25 854 aa18.22■□□□□ 0.51
CDH20-201ENST00000262717 RILPL2Q969X0 211 aa18.21■□□□□ 0.51
CDH20-201ENST00000262717 FOXO3O43524 673 aa18.21■□□□□ 0.51
CDH20-201ENST00000262717 PPIP5K1Q6PFW1 1433 aa18.2■□□□□ 0.5
CDH20-201ENST00000262717 INO80Q9ULG1 1556 aaPredicted RBP18.2■□□□□ 0.5
CDH20-201ENST00000262717 ABCC3O15438 1527 aa18.2■□□□□ 0.5
CDH20-201ENST00000262717 TRAK2O60296 914 aa18.2■□□□□ 0.5
CDH20-201ENST00000262717 HDAC1Q13547 482 aaPredicted RBP18.2■□□□□ 0.5
CDH20-201ENST00000262717 L1TD1Q5T7N2 865 aaKnown RBP18.2■□□□□ 0.5
CDH20-201ENST00000262717 ALDH1L2Q3SY69 923 aa18.19■□□□□ 0.5
CDH20-201ENST00000262717 TSHZ3Q63HK5 1081 aa18.19■□□□□ 0.5
CDH20-201ENST00000262717 TRIM44Q96DX7 344 aaPredicted RBP18.19■□□□□ 0.5
CDH20-201ENST00000262717 OS9Q13438 667 aaPredicted RBP18.19■□□□□ 0.5
CDH20-201ENST00000262717 MRPL50Q8N5N7 158 aaKnown RBP18.19■□□□□ 0.5
CDH20-201ENST00000262717 IFT57Q9NWB7 429 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms