RNA–Protein interactions for RNA: ENST00000261900.7

CCNT1-201, Transcript of cyclin T1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNT1, Length 6,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-201ENST00000261900 ZNF287Q9HBT7 754 aa10.1□□□□□ -0.79
CCNT1-201ENST00000261900 NINLQ9Y2I6 1382 aa10.1□□□□□ -0.79
CCNT1-201ENST00000261900 POLD1P28340 1107 aa10.1□□□□□ -0.79
CCNT1-201ENST00000261900 PPP4R3AQ6IN85 833 aa10.1□□□□□ -0.79
CCNT1-201ENST00000261900 MATR3P43243 847 aaKnown RBP eCLIP10.09□□□□□ -0.79
CCNT1-201ENST00000261900 TNNT3P45378 269 aaPredicted RBP10.09□□□□□ -0.79
CCNT1-201ENST00000261900 RUNDC1Q96C34 613 aa10.09□□□□□ -0.79
CCNT1-201ENST00000261900 SURF6O75683 361 aaKnown RBP10.09□□□□□ -0.79
CCNT1-201ENST00000261900 WDR70Q9NW82 654 aa10.09□□□□□ -0.79
CCNT1-201ENST00000261900 HIP1O00291 1037 aa10.09□□□□□ -0.79
CCNT1-201ENST00000261900 ZHX3Q9H4I2 956 aa10.09□□□□□ -0.79
CCNT1-201ENST00000261900 RAI14Q9P0K7 980 aa10.09□□□□□ -0.79
CCNT1-201ENST00000261900 MYO6Q9UM54 1294 aa10.09□□□□□ -0.79
CCNT1-201ENST00000261900 HDGFL1Q5TGJ6 251 aa10.08□□□□□ -0.8
CCNT1-201ENST00000261900 RPGRQ92834 1020 aaKnown RBP10.08□□□□□ -0.8
CCNT1-201ENST00000261900 OLFM4Q6UX06 510 aa10.08□□□□□ -0.8
CCNT1-201ENST00000261900 AK7Q96M32 723 aa10.08□□□□□ -0.8
CCNT1-201ENST00000261900 FOSBP53539 338 aa10.08□□□□□ -0.8
CCNT1-201ENST00000261900 TRIM22Q8IYM9 498 aa10.08□□□□□ -0.8
CCNT1-201ENST00000261900 CNTROBQ8N137 903 aa10.08□□□□□ -0.8
CCNT1-201ENST00000261900 KCNH5Q8NCM2 988 aa10.08□□□□□ -0.8
CCNT1-201ENST00000261900 TMOD3Q9NYL9 352 aa10.08□□□□□ -0.8
CCNT1-201ENST00000261900 BMP2KQ9NSY1 1161 aaPredicted RBP10.08□□□□□ -0.8
CCNT1-201ENST00000261900 CEP126Q9P2H0 1117 aa10.08□□□□□ -0.8
CCNT1-201ENST00000261900 ZNF219Q9P2Y4 722 aaPredicted RBP10.08□□□□□ -0.8
CCNT1-201ENST00000261900 CCDC88BA6NC98 1476 aa10.07□□□□□ -0.8
CCNT1-201ENST00000261900 XPCQ01831 940 aaPredicted RBP10.07□□□□□ -0.8
CCNT1-201ENST00000261900 CHMP5Q9NZZ3 219 aa10.07□□□□□ -0.8
CCNT1-201ENST00000261900 EXOC5O00471 708 aa10.07□□□□□ -0.8
CCNT1-201ENST00000261900 INTS3Q68E01 1043 aaKnown RBP10.07□□□□□ -0.8
CCNT1-201ENST00000261900 PIP4K2AP48426 406 aaPredicted RBP10.07□□□□□ -0.8
CCNT1-201ENST00000261900 DRC1Q96MC2 740 aa10.07□□□□□ -0.8
CCNT1-201ENST00000261900 PRAM1Q96QH2 718 aa10.07□□□□□ -0.8
CCNT1-201ENST00000261900 PPP6R1Q9UPN7 881 aa10.07□□□□□ -0.8
CCNT1-201ENST00000261900 GOLGA6L3A6NEY3 463 aa10.07□□□□□ -0.8
CCNT1-201ENST00000261900 PATL2C9JE40 543 aaKnown RBP10.07□□□□□ -0.8
CCNT1-201ENST00000261900 ATF7IPQ6VMQ6 1270 aa10.07□□□□□ -0.8
CCNT1-201ENST00000261900 CDK19Q9BWU1 502 aa10.07□□□□□ -0.8
CCNT1-201ENST00000261900 MAGEC2Q9UBF1 373 aaPredicted RBP10.07□□□□□ -0.8
CCNT1-201ENST00000261900 COG6Q9Y2V7 657 aa10.07□□□□□ -0.8
CCNT1-201ENST00000261900 LRP2BPQ9P2M1 347 aa10.06□□□□□ -0.8
CCNT1-201ENST00000261900 RUFY1Q96T51 708 aa10.06□□□□□ -0.8
CCNT1-201ENST00000261900 DDX49Q9Y6V7 483 aaKnown RBP10.06□□□□□ -0.8
CCNT1-201ENST00000261900 ANKIB1Q9P2G1 1089 aa10.06□□□□□ -0.8
CCNT1-201ENST00000261900 NF2P35240 595 aa10.06□□□□□ -0.8
CCNT1-201ENST00000261900 HOMER1Q86YM7 354 aa10.06□□□□□ -0.8
CCNT1-201ENST00000261900 SETQ01105 290 aaPredicted RBP10.06□□□□□ -0.8
CCNT1-201ENST00000261900 DDX11L8A8MPP1 907 aa10.06□□□□□ -0.8
CCNT1-201ENST00000261900 SASS6Q6UVJ0 657 aa10.06□□□□□ -0.8
CCNT1-201ENST00000261900 SLF2Q8IX21 1173 aa10.06□□□□□ -0.8
CCNT1-201ENST00000261900 SDF4Q9BRK5 362 aa10.06□□□□□ -0.8
CCNT1-201ENST00000261900 MYOM3Q5VTT5 1437 aa10.05□□□□□ -0.8
CCNT1-201ENST00000261900 MYO1BO43795 1136 aa10.05□□□□□ -0.8
CCNT1-201ENST00000261900 ZRSR2Q15696 482 aaKnown RBP10.05□□□□□ -0.8
CCNT1-201ENST00000261900 CAVIN4Q5BKX8 364 aa10.05□□□□□ -0.8
CCNT1-201ENST00000261900 MPHOSPH6Q99547 160 aaKnown RBP10.05□□□□□ -0.8
CCNT1-201ENST00000261900 GAPVD1Q14C86 1478 aa10.05□□□□□ -0.8
CCNT1-201ENST00000261900 CRBNQ96SW2 442 aa10.05□□□□□ -0.8
CCNT1-201ENST00000261900 FEZ1Q99689 392 aa10.05□□□□□ -0.8
CCNT1-201ENST00000261900 MYL6BP14649 208 aa10.04□□□□□ -0.8
CCNT1-201ENST00000261900 TDO2P48775 406 aa10.04□□□□□ -0.8
CCNT1-201ENST00000261900 FAM161AQ3B820 660 aa10.04□□□□□ -0.8
CCNT1-201ENST00000261900 KDM4AO75164 1064 aa10.04□□□□□ -0.8
CCNT1-201ENST00000261900 VTI1AQ96AJ9 217 aa10.04□□□□□ -0.8
CCNT1-201ENST00000261900 UBAC1Q9BSL1 405 aa10.04□□□□□ -0.8
CCNT1-201ENST00000261900 C6orf229H3BNL8 230 aa10.04□□□□□ -0.8
CCNT1-201ENST00000261900 ZNF622Q969S3 477 aaKnown RBP eCLIP10.04□□□□□ -0.81e-8■■□□□ 13.8
CCNT1-201ENST00000261900 SSBP05455 408 aaKnown RBP eCLIP10.04□□□□□ -0.8
CCNT1-201ENST00000261900 CENPQQ7L2Z9 268 aaPredicted RBP10.03□□□□□ -0.8
CCNT1-201ENST00000261900 ABCF2Q9UG63 623 aa10.03□□□□□ -0.8
CCNT1-201ENST00000261900 CCDC69A6NI79 296 aa10.03□□□□□ -0.8
CCNT1-201ENST00000261900 POLR3DP05423 398 aaPredicted RBP10.03□□□□□ -0.8
CCNT1-201ENST00000261900 MAP3K9P80192 1104 aa10.03□□□□□ -0.8
CCNT1-201ENST00000261900 STIM1Q13586 685 aa10.03□□□□□ -0.8
CCNT1-201ENST00000261900 FILIP1LQ4L180 1135 aa10.03□□□□□ -0.8
CCNT1-201ENST00000261900 ANKRD18AQ8IVF6 992 aa10.03□□□□□ -0.8
CCNT1-201ENST00000261900 LUC7LQ9NQ29 371 aaKnown RBP10.03□□□□□ -0.8
CCNT1-201ENST00000261900 LRPPRCP42704 1394 aaKnown RBP10.03□□□□□ -0.8
CCNT1-201ENST00000261900 RAPGEF3O95398 923 aa10.03□□□□□ -0.8
CCNT1-201ENST00000261900 USP5P45974 858 aa10.03□□□□□ -0.8
CCNT1-201ENST00000261900 JMYQ8N9B5 988 aa10.03□□□□□ -0.8
CCNT1-201ENST00000261900 NAT10Q9H0A0 1025 aaKnown RBP10.03□□□□□ -0.8
CCNT1-201ENST00000261900 PTCD1O75127 700 aaKnown RBP10.03□□□□□ -0.8
CCNT1-201ENST00000261900 IFIT1P09914 478 aaKnown RBP10.03□□□□□ -0.8
CCNT1-201ENST00000261900 CA8P35219 290 aa10.03□□□□□ -0.8
CCNT1-201ENST00000261900 NEFHP12036 1026 aa10.02□□□□□ -0.8
CCNT1-201ENST00000261900 SULT6B1Q6IMI4 303 aa10.02□□□□□ -0.8
CCNT1-201ENST00000261900 NOL7Q9UMY1 257 aaKnown RBP10.02□□□□□ -0.8
CCNT1-201ENST00000261900 RFX1P22670 979 aa10.02□□□□□ -0.8
CCNT1-201ENST00000261900 USP47Q96K76 1375 aa10.02□□□□□ -0.81
CCNT1-201ENST00000261900 NUP133Q8WUM0 1156 aa10.02□□□□□ -0.81
CCNT1-201ENST00000261900 HSP90AB3PQ58FF7 597 aa10.02□□□□□ -0.81
CCNT1-201ENST00000261900 SRCIN1Q9C0H9 1055 aa10.02□□□□□ -0.81
CCNT1-201ENST00000261900 POTEJP0CG39 1038 aa10.02□□□□□ -0.81
CCNT1-201ENST00000261900 SKOR2Q2VWA4 1001 aaPredicted RBP10.02□□□□□ -0.81
CCNT1-201ENST00000261900 CADPS2Q86UW7 1296 aa10.02□□□□□ -0.81
CCNT1-201ENST00000261900 STK11IPQ8N1F8 1099 aa10.02□□□□□ -0.81
CCNT1-201ENST00000261900 BIN2Q9UBW5 565 aaPredicted RBP10.02□□□□□ -0.81
CCNT1-201ENST00000261900 PRKAR2BP31323 418 aa10.01□□□□□ -0.81
CCNT1-201ENST00000261900 DZIP1Q86YF9 867 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms