RNA–Protein interactions for RNA: ENST00000254998.2

NXT1-201, Transcript of nuclear transport factor 2 like export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXT1, Length 1,123 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXT1-201ENST00000254998 EIF4G2P78344 907 aaKnown RBP eCLIP30.26■■■□□ 2.43
NXT1-201ENST00000254998 SSH2Q76I76 1423 aa30.26■■■□□ 2.43
NXT1-201ENST00000254998 NINLQ9Y2I6 1382 aa30.26■■■□□ 2.43
NXT1-201ENST00000254998 ABCA3Q99758 1704 aa30.25■■■□□ 2.43
NXT1-201ENST00000254998 CDCA8Q53HL2 280 aa30.24■■■□□ 2.43
NXT1-201ENST00000254998 MARF1Q9Y4F3 1742 aaKnown RBP30.24■■■□□ 2.43
NXT1-201ENST00000254998 CABLES1Q8TDN4 633 aa30.22■■■□□ 2.43
NXT1-201ENST00000254998 C8orf37Q96NL8 207 aa30.22■■■□□ 2.43
NXT1-201ENST00000254998 CD163L1Q9NR16 1453 aa30.22■■■□□ 2.43
NXT1-201ENST00000254998 HSPA5P11021 654 aaKnown RBP30.21■■■□□ 2.43
NXT1-201ENST00000254998 ZNF772Q68DY9 489 aaPredicted RBP30.21■■■□□ 2.43
NXT1-201ENST00000254998 SLC12A5Q9H2X9 1139 aa30.21■■■□□ 2.43
NXT1-201ENST00000254998 CRYBG1Q9Y4K1 1723 aa30.21■■■□□ 2.43
NXT1-201ENST00000254998 AFF2P51816 1311 aa30.21■■■□□ 2.43
NXT1-201ENST00000254998 TMC1Q8TDI8 760 aa30.2■■■□□ 2.43
NXT1-201ENST00000254998 KTN1Q86UP2 1357 aaKnown RBP30.19■■■□□ 2.42
NXT1-201ENST00000254998 NGLY1Q96IV0 654 aa30.19■■■□□ 2.42
NXT1-201ENST00000254998 MON2Q7Z3U7 1717 aa30.19■■■□□ 2.42
NXT1-201ENST00000254998 HAP1P54257 671 aaPredicted RBP30.18■■■□□ 2.42
NXT1-201ENST00000254998 FNBP4Q8N3X1 1017 aaPredicted RBP30.18■■■□□ 2.42
NXT1-201ENST00000254998 ABTB2Q8N961 1025 aa30.18■■■□□ 2.42
NXT1-201ENST00000254998 NRKQ7Z2Y5 1582 aa30.18■■■□□ 2.42
NXT1-201ENST00000254998 POTEAQ6S8J7 498 aa30.17■■■□□ 2.42
NXT1-201ENST00000254998 TERF2IPQ9NYB0 399 aa30.17■■■□□ 2.42
NXT1-201ENST00000254998 HDGFL2Q7Z4V5 671 aaPredicted RBP30.16■■■□□ 2.42
NXT1-201ENST00000254998 TTC21BQ7Z4L5 1316 aa30.16■■■□□ 2.42
NXT1-201ENST00000254998 TTC21AQ8NDW8 1320 aa30.16■■■□□ 2.42
NXT1-201ENST00000254998 ILDR2Q71H61 639 aa30.15■■■□□ 2.42
NXT1-201ENST00000254998 USP19O94966 1318 aa30.15■■■□□ 2.42
NXT1-201ENST00000254998 NLRP13Q86W25 1043 aa30.13■■■□□ 2.41
NXT1-201ENST00000254998 PHRF1Q9P1Y6 1649 aaKnown RBP30.13■■■□□ 2.41
NXT1-201ENST00000254998 A0A1W2PP64 1363 aa30.13■■■□□ 2.41
NXT1-201ENST00000254998 PIK3C2AO00443 1686 aa30.12■■■□□ 2.41
NXT1-201ENST00000254998 PLEKHG5O94827 1062 aa30.12■■■□□ 2.41
NXT1-201ENST00000254998 NUTM2GQ5VZR2 741 aa30.12■■■□□ 2.41
NXT1-201ENST00000254998 EDC4Q6P2E9 1401 aaKnown RBP30.12■■■□□ 2.41
NXT1-201ENST00000254998 SLIT2O94813 1529 aa30.11■■■□□ 2.41
NXT1-201ENST00000254998 ANKRD36BQ8N2N9 1353 aa30.09■■■□□ 2.41
NXT1-201ENST00000254998 BCL9LQ86UU0 1499 aa30.08■■■□□ 2.41
NXT1-201ENST00000254998 USP21Q9UK80 565 aa30.08■■■□□ 2.41
NXT1-201ENST00000254998 NLRP6P59044 892 aa30.07■■■□□ 2.4
NXT1-201ENST00000254998 FAM83GA6ND36 823 aa30.06■■■□□ 2.4
NXT1-201ENST00000254998 SLIT3O75094 1523 aa30.06■■■□□ 2.4
NXT1-201ENST00000254998 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.05■■■□□ 2.4
NXT1-201ENST00000254998 MYOM1P52179 1685 aa30.05■■■□□ 2.4
NXT1-201ENST00000254998 NWD2Q9ULI1 1742 aa30.05■■■□□ 2.4
NXT1-201ENST00000254998 QTRT2Q9H974 415 aaKnown RBP30.04■■■□□ 2.4
NXT1-201ENST00000254998 COL14A1Q05707 1796 aaKnown RBP30.04■■■□□ 2.4
NXT1-201ENST00000254998 CPDO75976 1380 aa30.03■■■□□ 2.4
NXT1-201ENST00000254998 USP31Q70CQ4 1352 aa30.03■■■□□ 2.4
NXT1-201ENST00000254998 GCP02774 474 aa30.03■■■□□ 2.4
NXT1-201ENST00000254998 PLCH1Q4KWH8 1693 aa30.03■■■□□ 2.4
NXT1-201ENST00000254998 USP54Q70EL1 1684 aa30.03■■■□□ 2.4
NXT1-201ENST00000254998 ATRNO75882 1429 aa30.03■■■□□ 2.4
NXT1-201ENST00000254998 UNC5CLQ8IV45 518 aa30.02■■■□□ 2.4
NXT1-201ENST00000254998 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.02■■■□□ 2.4
NXT1-201ENST00000254998 TRPC5Q9UL62 973 aaPredicted RBP30.02■■■□□ 2.4
NXT1-201ENST00000254998 KIAA0232Q92628 1395 aa30.02■■■□□ 2.4
NXT1-201ENST00000254998 PRDM11Q9NQV5 511 aa30.01■■■□□ 2.39
NXT1-201ENST00000254998 RXRBP28702 533 aa29.99■■■□□ 2.39
NXT1-201ENST00000254998 NME9Q86XW9 330 aa29.98■■■□□ 2.39
NXT1-201ENST00000254998 ZC3H6P61129 1189 aaKnown RBP29.97■■■□□ 2.39
NXT1-201ENST00000254998 RBM6P78332 1123 aaKnown RBP29.97■■■□□ 2.39
NXT1-201ENST00000254998 CDK12Q9NYV4 1490 aaPredicted RBP29.96■■■□□ 2.39
NXT1-201ENST00000254998 KCNH5Q8NCM2 988 aa29.96■■■□□ 2.39
NXT1-201ENST00000254998 C11orf95C9JLR9 678 aaPredicted RBP29.95■■■□□ 2.39
NXT1-201ENST00000254998 NRAPQ86VF7 1730 aa29.94■■■□□ 2.38
NXT1-201ENST00000254998 BTG4Q9NY30 223 aa29.94■■■□□ 2.38
NXT1-201ENST00000254998 ZRANB1Q9UGI0 708 aa29.93■■■□□ 2.38
NXT1-201ENST00000254998 OVOS2A0A0J9YW53 1432 aa29.93■■■□□ 2.38
NXT1-201ENST00000254998 OVOS2Q6IE36 1432 aa29.93■■■□□ 2.38
NXT1-201ENST00000254998 NFAT5O94916 1531 aa29.92■■■□□ 2.38
NXT1-201ENST00000254998 CHRNA2Q15822 529 aa29.92■■■□□ 2.38
NXT1-201ENST00000254998 VPS72Q15906 364 aa29.92■■■□□ 2.38
NXT1-201ENST00000254998 LMO7Q8WWI1 1683 aa29.91■■■□□ 2.38
NXT1-201ENST00000254998 GJD4Q96KN9 370 aaPredicted RBP29.9■■■□□ 2.38
NXT1-201ENST00000254998 POLR3GLQ9BT43 218 aa29.9■■■□□ 2.38
NXT1-201ENST00000254998 CARD14Q9BXL6 1004 aa29.9■■■□□ 2.38
NXT1-201ENST00000254998 AATKQ6ZMQ8 1374 aa29.89■■■□□ 2.37
NXT1-201ENST00000254998 ARHGEF25Q86VW2 580 aa29.88■■■□□ 2.37
NXT1-201ENST00000254998 KIF7Q2M1P5 1343 aa29.87■■■□□ 2.37
NXT1-201ENST00000254998 NSD3Q9BZ95 1437 aa29.87■■■□□ 2.37
NXT1-201ENST00000254998 CAMTA1Q9Y6Y1 1673 aa29.86■■■□□ 2.37
NXT1-201ENST00000254998 FYB1O15117 783 aa29.85■■■□□ 2.37
NXT1-201ENST00000254998 GLI3P10071 1580 aa29.85■■■□□ 2.37
NXT1-201ENST00000254998 COG3Q96JB2 828 aa29.84■■■□□ 2.37
NXT1-201ENST00000254998 COL18A1P39060 1754 aa29.84■■■□□ 2.37
NXT1-201ENST00000254998 ABCC6O95255 1503 aa29.83■■■□□ 2.37
NXT1-201ENST00000254998 RGS12O14924 1447 aa29.83■■■□□ 2.37
NXT1-201ENST00000254998 SOCS7O14512 581 aa29.83■■■□□ 2.37
NXT1-201ENST00000254998 KIF20BQ96Q89 1820 aa29.82■■■□□ 2.36
NXT1-201ENST00000254998 SOX12O15370 315 aa29.81■■■□□ 2.36
NXT1-201ENST00000254998 SPATA31A5Q5VU36 1347 aa29.79■■■□□ 2.36
NXT1-201ENST00000254998 SPATA31A7Q8IWB4 1347 aa29.79■■■□□ 2.36
NXT1-201ENST00000254998 PANK3Q9H999 370 aa29.79■■■□□ 2.36
NXT1-201ENST00000254998 COL5A2P05997 1499 aaPredicted RBP29.79■■■□□ 2.36
NXT1-201ENST00000254998 CGNL1Q0VF96 1302 aa29.78■■■□□ 2.36
NXT1-201ENST00000254998 GGNBP2Q9H3C7 697 aa29.78■■■□□ 2.36
NXT1-201ENST00000254998 CCDC9Q9Y3X0 531 aaKnown RBP29.78■■■□□ 2.36
NXT1-201ENST00000254998 CCDC7Q96M83 1385 aa29.77■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms