RNA–Protein interactions for RNA: ENST00000254940.9

NIP7-201, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIP7, Length 2,402 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-201ENST00000254940 ANKARQ7Z5J8 1434 aa16.51■□□□□ 0.23
NIP7-201ENST00000254940 PLEKHG3A1L390 1219 aa16.5■□□□□ 0.23
NIP7-201ENST00000254940 KRT28Q7Z3Y7 464 aa16.5■□□□□ 0.23
NIP7-201ENST00000254940 ANKRD36BQ8N2N9 1353 aa16.49■□□□□ 0.23
NIP7-201ENST00000254940 KNSTRNQ9Y448 316 aa16.49■□□□□ 0.23
NIP7-201ENST00000254940 CCER2I3L3R5 266 aa16.48■□□□□ 0.23
NIP7-201ENST00000254940 PER1O15534 1290 aaPredicted RBP16.47■□□□□ 0.23
NIP7-201ENST00000254940 AKAP12Q02952 1782 aa16.47■□□□□ 0.23
NIP7-201ENST00000254940 CABLES1Q8TDN4 633 aa16.46■□□□□ 0.23
NIP7-201ENST00000254940 PUS7Q96PZ0 661 aaKnown RBP16.46■□□□□ 0.23
NIP7-201ENST00000254940 CPSF1Q10570 1443 aaKnown RBP16.46■□□□□ 0.23
NIP7-201ENST00000254940 ZBTB7CA1YPR0 619 aa16.46■□□□□ 0.23
NIP7-201ENST00000254940 USP6P35125 1406 aa16.46■□□□□ 0.22
NIP7-201ENST00000254940 ABTB2Q8N961 1025 aa16.45■□□□□ 0.22
NIP7-201ENST00000254940 TTC21BQ7Z4L5 1316 aa16.45■□□□□ 0.22
NIP7-201ENST00000254940 POLR3AO14802 1390 aaPredicted RBP16.44■□□□□ 0.22
NIP7-201ENST00000254940 MON2Q7Z3U7 1717 aa16.44■□□□□ 0.22
NIP7-201ENST00000254940 FYB1O15117 783 aa16.43■□□□□ 0.22
NIP7-201ENST00000254940 AMER1Q5JTC6 1135 aaPredicted RBP16.43■□□□□ 0.22
NIP7-201ENST00000254940 NPHP3Q7Z494 1330 aa16.42■□□□□ 0.22
NIP7-201ENST00000254940 NLRP6P59044 892 aa16.42■□□□□ 0.22
NIP7-201ENST00000254940 FAM9BQ8IZU0 186 aa16.42■□□□□ 0.22
NIP7-201ENST00000254940 NINLQ9Y2I6 1382 aa16.42■□□□□ 0.22
NIP7-201ENST00000254940 ZNF692Q9BU19 519 aaPredicted RBP16.41■□□□□ 0.22
NIP7-201ENST00000254940 KIF1AQ12756 1690 aa16.41■□□□□ 0.22
NIP7-201ENST00000254940 HSPA1LP34931 641 aa16.4■□□□□ 0.22
NIP7-201ENST00000254940 PXDNQ92626 1479 aa16.4■□□□□ 0.22
NIP7-201ENST00000254940 CGNL1Q0VF96 1302 aa16.4■□□□□ 0.22
NIP7-201ENST00000254940 PHLPP1O60346 1717 aa16.4■□□□□ 0.22
NIP7-201ENST00000254940 EDC4Q6P2E9 1401 aaKnown RBP16.39■□□□□ 0.22
NIP7-201ENST00000254940 MRS2Q9HD23 443 aa16.39■□□□□ 0.21
NIP7-201ENST00000254940 NRKQ7Z2Y5 1582 aa16.39■□□□□ 0.21
NIP7-201ENST00000254940 PIK3C2AO00443 1686 aa16.39■□□□□ 0.21
NIP7-201ENST00000254940 PPM1GO15355 546 aaPredicted RBP16.39■□□□□ 0.21
NIP7-201ENST00000254940 MORC1Q86VD1 984 aa16.39■□□□□ 0.21
NIP7-201ENST00000254940 KIF20BQ96Q89 1820 aa16.39■□□□□ 0.21
NIP7-201ENST00000254940 TRPM3Q9HCF6 1732 aaPredicted RBP16.38■□□□□ 0.21
NIP7-201ENST00000254940 NUTM2BA6NNL0 878 aaPredicted RBP16.37■□□□□ 0.21
NIP7-201ENST00000254940 NUTM2EB1AL46 878 aaPredicted RBP16.37■□□□□ 0.21
NIP7-201ENST00000254940 HNRNPUQ00839 825 aaKnown RBP eCLIP16.37■□□□□ 0.21
NIP7-201ENST00000254940 RRS1Q15050 365 aaKnown RBP16.37■□□□□ 0.21
NIP7-201ENST00000254940 NUTM2AQ8IVF1 878 aaPredicted RBP16.37■□□□□ 0.21
NIP7-201ENST00000254940 SSH2Q76I76 1423 aa16.37■□□□□ 0.21
NIP7-201ENST00000254940 NHSL1Q5SYE7 1610 aa16.37■□□□□ 0.21
NIP7-201ENST00000254940 SOS2Q07890 1332 aaPredicted RBP16.36■□□□□ 0.21
NIP7-201ENST00000254940 COG3Q96JB2 828 aa16.36■□□□□ 0.21
NIP7-201ENST00000254940 SPATA31A3Q5VYP0 1347 aa16.35■□□□□ 0.21
NIP7-201ENST00000254940 ZC3H6P61129 1189 aaKnown RBP16.35■□□□□ 0.21
NIP7-201ENST00000254940 HAP1P54257 671 aaPredicted RBP16.34■□□□□ 0.21
NIP7-201ENST00000254940 IQSEC2Q5JU85 1478 aa16.33■□□□□ 0.21
NIP7-201ENST00000254940 TNS3Q68CZ2 1445 aa16.33■□□□□ 0.21
NIP7-201ENST00000254940 EMILIN1Q9Y6C2 1016 aa16.33■□□□□ 0.2
NIP7-201ENST00000254940 MARF1Q9Y4F3 1742 aaKnown RBP16.32■□□□□ 0.2
NIP7-201ENST00000254940 TTC21AQ8NDW8 1320 aa16.32■□□□□ 0.2
NIP7-201ENST00000254940 ADAMTS2O95450 1211 aa16.31■□□□□ 0.2
NIP7-201ENST00000254940 CHRNA2Q15822 529 aa16.31■□□□□ 0.2
NIP7-201ENST00000254940 ALS2Q96Q42 1657 aa16.31■□□□□ 0.2
NIP7-201ENST00000254940 COL16A1Q07092 1604 aaPredicted RBP16.31■□□□□ 0.2
NIP7-201ENST00000254940 LRRC59Q96AG4 307 aaKnown RBP16.3■□□□□ 0.2
NIP7-201ENST00000254940 AHDC1Q5TGY3 1603 aaPredicted RBP16.3■□□□□ 0.2
NIP7-201ENST00000254940 NLRP13Q86W25 1043 aa16.3■□□□□ 0.2
NIP7-201ENST00000254940 MED1Q15648 1581 aaPredicted RBP16.3■□□□□ 0.2
NIP7-201ENST00000254940 PPP2R1AP30153 589 aa16.29■□□□□ 0.2
NIP7-201ENST00000254940 SBNO1A3KN83 1393 aa16.29■□□□□ 0.2
NIP7-201ENST00000254940 LTV1Q96GA3 475 aaPredicted RBP16.29■□□□□ 0.2
NIP7-201ENST00000254940 MAP2P11137 1827 aaKnown RBP16.29■□□□□ 0.2
NIP7-201ENST00000254940 GCP02774 474 aa16.28■□□□□ 0.2
NIP7-201ENST00000254940 OVOS2A0A0J9YW53 1432 aa16.28■□□□□ 0.2
NIP7-201ENST00000254940 OVOS2Q6IE36 1432 aa16.28■□□□□ 0.2
NIP7-201ENST00000254940 MTHFSP49914 203 aa16.27■□□□□ 0.2
NIP7-201ENST00000254940 ANKRD26Q9UPS8 1709 aa16.27■□□□□ 0.2
NIP7-201ENST00000254940 PNPLA6Q8IY17 1366 aa16.27■□□□□ 0.19
NIP7-201ENST00000254940 PARD3Q8TEW0 1356 aa16.27■□□□□ 0.19
NIP7-201ENST00000254940 POLKQ9UBT6 870 aa16.25■□□□□ 0.19
NIP7-201ENST00000254940 MAP3K19Q56UN5 1328 aa16.25■□□□□ 0.19
NIP7-201ENST00000254940 ARHGEF10O15013 1369 aa16.24■□□□□ 0.19
NIP7-201ENST00000254940 SALL2Q9Y467 1007 aaPredicted RBP16.24■□□□□ 0.19
NIP7-201ENST00000254940 AMPHP49418 695 aa16.24■□□□□ 0.19
NIP7-201ENST00000254940 HSP90AB2PQ58FF8 381 aa16.24■□□□□ 0.19
NIP7-201ENST00000254940 USP31Q70CQ4 1352 aa16.23■□□□□ 0.19
NIP7-201ENST00000254940 KIAA0232Q92628 1395 aa16.23■□□□□ 0.19
NIP7-201ENST00000254940 PHRF1Q9P1Y6 1649 aaKnown RBP16.23■□□□□ 0.19
NIP7-201ENST00000254940 LTN1O94822 1766 aa16.23■□□□□ 0.19
NIP7-201ENST00000254940 RALBP1Q15311 655 aa16.23■□□□□ 0.19
NIP7-201ENST00000254940 PNISRQ8TF01 805 aaKnown RBP16.23■□□□□ 0.19
NIP7-201ENST00000254940 FBXO41Q8TF61 875 aa16.23■□□□□ 0.19
NIP7-201ENST00000254940 AXIN2Q9Y2T1 843 aa16.23■□□□□ 0.19
NIP7-201ENST00000254940 MYBBP1AQ9BQG0 1328 aaKnown RBP16.23■□□□□ 0.19
NIP7-201ENST00000254940 RGPD5Q99666 1765 aa16.22■□□□□ 0.19
NIP7-201ENST00000254940 NSD2O96028 1365 aa16.22■□□□□ 0.19
NIP7-201ENST00000254940 USP19O94966 1318 aa16.22■□□□□ 0.19
NIP7-201ENST00000254940 PRDM11Q9NQV5 511 aa16.22■□□□□ 0.19
NIP7-201ENST00000254940 PEAK1Q9H792 1746 aa16.22■□□□□ 0.19
NIP7-201ENST00000254940 ABCA3Q99758 1704 aa16.21■□□□□ 0.19
NIP7-201ENST00000254940 NPC1L1Q9UHC9 1359 aa16.21■□□□□ 0.19
NIP7-201ENST00000254940 CRYBG1Q9Y4K1 1723 aa16.21■□□□□ 0.18
NIP7-201ENST00000254940 FAM83GA6ND36 823 aa16.2■□□□□ 0.18
NIP7-201ENST00000254940 SUPT16HQ9Y5B9 1047 aaKnown RBP16.2■□□□□ 0.18
NIP7-201ENST00000254940 NFAT5O94916 1531 aa16.2■□□□□ 0.18
NIP7-201ENST00000254940 C8orf37Q96NL8 207 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms