RNA–Protein interactions for RNA: ENST00000246957.9

TRAP1-201, Transcript of TNF receptor associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAP1, Length 2,296 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-201ENST00000246957 TERF2IPQ9NYB0 399 aa17.96■□□□□ 0.47
TRAP1-201ENST00000246957 PIK3C2AO00443 1686 aa17.96■□□□□ 0.47
TRAP1-201ENST00000246957 LMOD2Q6P5Q4 547 aa17.96■□□□□ 0.47
TRAP1-201ENST00000246957 POLR3AO14802 1390 aaPredicted RBP17.96■□□□□ 0.46
TRAP1-201ENST00000246957 PSME1Q06323 249 aa17.95■□□□□ 0.46
TRAP1-201ENST00000246957 KNSTRNQ9Y448 316 aa17.95■□□□□ 0.46
TRAP1-201ENST00000246957 TRPM3Q9HCF6 1732 aaPredicted RBP17.94■□□□□ 0.46
TRAP1-201ENST00000246957 MARF1Q9Y4F3 1742 aaKnown RBP17.94■□□□□ 0.46
TRAP1-201ENST00000246957 KIF1AQ12756 1690 aa17.93■□□□□ 0.46
TRAP1-201ENST00000246957 FYB1O15117 783 aa17.93■□□□□ 0.46
TRAP1-201ENST00000246957 TTC21BQ7Z4L5 1316 aa17.93■□□□□ 0.46
TRAP1-201ENST00000246957 CCDC184Q52MB2 194 aa17.92■□□□□ 0.46
TRAP1-201ENST00000246957 KRT28Q7Z3Y7 464 aa17.92■□□□□ 0.46
TRAP1-201ENST00000246957 NINLQ9Y2I6 1382 aa17.91■□□□□ 0.46
TRAP1-201ENST00000246957 SSH2Q76I76 1423 aa17.91■□□□□ 0.46
TRAP1-201ENST00000246957 NHSL1Q5SYE7 1610 aa17.91■□□□□ 0.46
TRAP1-201ENST00000246957 CABLES1Q8TDN4 633 aa17.91■□□□□ 0.46
TRAP1-201ENST00000246957 PXDNQ92626 1479 aa17.91■□□□□ 0.46
TRAP1-201ENST00000246957 EDC4Q6P2E9 1401 aaKnown RBP17.9■□□□□ 0.46
TRAP1-201ENST00000246957 MAP2P11137 1827 aaKnown RBP17.89■□□□□ 0.45
TRAP1-201ENST00000246957 TOM1O60784 492 aa17.88■□□□□ 0.45
TRAP1-201ENST00000246957 ABTB2Q8N961 1025 aa17.88■□□□□ 0.45
TRAP1-201ENST00000246957 PRKRIP1Q9H875 184 aaPredicted RBP17.88■□□□□ 0.45
TRAP1-201ENST00000246957 PHLPP1O60346 1717 aa17.88■□□□□ 0.45
TRAP1-201ENST00000246957 ALS2Q96Q42 1657 aa17.87■□□□□ 0.45
TRAP1-201ENST00000246957 ANKRD26Q9UPS8 1709 aa17.87■□□□□ 0.45
TRAP1-201ENST00000246957 CGNL1Q0VF96 1302 aa17.87■□□□□ 0.45
TRAP1-201ENST00000246957 ZNF692Q9BU19 519 aaPredicted RBP17.86■□□□□ 0.45
TRAP1-201ENST00000246957 NPHP3Q7Z494 1330 aa17.86■□□□□ 0.45
TRAP1-201ENST00000246957 NLRP6P59044 892 aa17.86■□□□□ 0.45
TRAP1-201ENST00000246957 ANP32CO43423 234 aa17.84■□□□□ 0.45
TRAP1-201ENST00000246957 RRS1Q15050 365 aaKnown RBP17.84■□□□□ 0.45
TRAP1-201ENST00000246957 SENP3-EIF4A1A0A087X0R7 540 aa17.83■□□□□ 0.44
TRAP1-201ENST00000246957 MORC1Q86VD1 984 aa17.83■□□□□ 0.44
TRAP1-201ENST00000246957 SOS2Q07890 1332 aaPredicted RBP17.82■□□□□ 0.44
TRAP1-201ENST00000246957 COL16A1Q07092 1604 aaPredicted RBP17.82■□□□□ 0.44
TRAP1-201ENST00000246957 ZBTB7CA1YPR0 619 aa17.82■□□□□ 0.44
TRAP1-201ENST00000246957 MED1Q15648 1581 aaPredicted RBP17.82■□□□□ 0.44
TRAP1-201ENST00000246957 PARD3Q8TEW0 1356 aa17.82■□□□□ 0.44
TRAP1-201ENST00000246957 OVOS2A0A0J9YW53 1432 aa17.81■□□□□ 0.44
TRAP1-201ENST00000246957 OVOS2Q6IE36 1432 aa17.81■□□□□ 0.44
TRAP1-201ENST00000246957 PPM1GO15355 546 aaPredicted RBP17.81■□□□□ 0.44
TRAP1-201ENST00000246957 EMILIN1Q9Y6C2 1016 aa17.81■□□□□ 0.44
TRAP1-201ENST00000246957 SPATA31A3Q5VYP0 1347 aa17.8■□□□□ 0.44
TRAP1-201ENST00000246957 LTN1O94822 1766 aa17.8■□□□□ 0.44
TRAP1-201ENST00000246957 RGPD5Q99666 1765 aa17.8■□□□□ 0.44
TRAP1-201ENST00000246957 TNS3Q68CZ2 1445 aa17.8■□□□□ 0.44
TRAP1-201ENST00000246957 HSPA1LP34931 641 aa17.79■□□□□ 0.44
TRAP1-201ENST00000246957 COG3Q96JB2 828 aa17.79■□□□□ 0.44
TRAP1-201ENST00000246957 CRYBG1Q9Y4K1 1723 aa17.79■□□□□ 0.44
TRAP1-201ENST00000246957 AHDC1Q5TGY3 1603 aaPredicted RBP17.79■□□□□ 0.44
TRAP1-201ENST00000246957 PEAK1Q9H792 1746 aa17.78■□□□□ 0.44
TRAP1-201ENST00000246957 PPP2R1AP30153 589 aa17.78■□□□□ 0.44
TRAP1-201ENST00000246957 IQSEC2Q5JU85 1478 aa17.78■□□□□ 0.44
TRAP1-201ENST00000246957 ABCA3Q99758 1704 aa17.78■□□□□ 0.44
TRAP1-201ENST00000246957 PHRF1Q9P1Y6 1649 aaKnown RBP17.77■□□□□ 0.44
TRAP1-201ENST00000246957 ZC3H6P61129 1189 aaKnown RBP17.77■□□□□ 0.44
TRAP1-201ENST00000246957 TTC21AQ8NDW8 1320 aa17.77■□□□□ 0.44
TRAP1-201ENST00000246957 MTHFSP49914 203 aa17.74■□□□□ 0.43
TRAP1-201ENST00000246957 CHRNA2Q15822 529 aa17.74■□□□□ 0.43
TRAP1-201ENST00000246957 SBNO1A3KN83 1393 aa17.74■□□□□ 0.43
TRAP1-201ENST00000246957 NPC1L1Q9UHC9 1359 aa17.74■□□□□ 0.43
TRAP1-201ENST00000246957 NUTM2BA6NNL0 878 aaPredicted RBP17.73■□□□□ 0.43
TRAP1-201ENST00000246957 NUTM2EB1AL46 878 aaPredicted RBP17.73■□□□□ 0.43
TRAP1-201ENST00000246957 NUTM2AQ8IVF1 878 aaPredicted RBP17.73■□□□□ 0.43
TRAP1-201ENST00000246957 POLKQ9UBT6 870 aa17.73■□□□□ 0.43
TRAP1-201ENST00000246957 NFAT5O94916 1531 aa17.73■□□□□ 0.43
TRAP1-201ENST00000246957 USP54Q70EL1 1684 aa17.73■□□□□ 0.43
TRAP1-201ENST00000246957 GCP02774 474 aa17.73■□□□□ 0.43
TRAP1-201ENST00000246957 RGPD2P0DJD1 1756 aa17.73■□□□□ 0.43
TRAP1-201ENST00000246957 MAP3K19Q56UN5 1328 aa17.72■□□□□ 0.43
TRAP1-201ENST00000246957 MYBBP1AQ9BQG0 1328 aaKnown RBP17.72■□□□□ 0.43
TRAP1-201ENST00000246957 USP31Q70CQ4 1352 aa17.72■□□□□ 0.43
TRAP1-201ENST00000246957 NLRP13Q86W25 1043 aa17.72■□□□□ 0.43
TRAP1-201ENST00000246957 NSD2O96028 1365 aa17.71■□□□□ 0.43
TRAP1-201ENST00000246957 PNPLA6Q8IY17 1366 aa17.71■□□□□ 0.43
TRAP1-201ENST00000246957 RALBP1Q15311 655 aa17.7■□□□□ 0.42
TRAP1-201ENST00000246957 MRS2Q9HD23 443 aa17.7■□□□□ 0.42
TRAP1-201ENST00000246957 ADAMTS2O95450 1211 aa17.7■□□□□ 0.42
TRAP1-201ENST00000246957 HSP90AB2PQ58FF8 381 aa17.7■□□□□ 0.42
TRAP1-201ENST00000246957 LRRC59Q96AG4 307 aaKnown RBP17.7■□□□□ 0.42
TRAP1-201ENST00000246957 USP19O94966 1318 aa17.69■□□□□ 0.42
TRAP1-201ENST00000246957 AXIN2Q9Y2T1 843 aa17.69■□□□□ 0.42
TRAP1-201ENST00000246957 SLIT3O75094 1523 aa17.69■□□□□ 0.42
TRAP1-201ENST00000246957 LTV1Q96GA3 475 aaPredicted RBP17.69■□□□□ 0.42
TRAP1-201ENST00000246957 KIAA0232Q92628 1395 aa17.68■□□□□ 0.42
TRAP1-201ENST00000246957 HAP1P54257 671 aaPredicted RBP17.68■□□□□ 0.42
TRAP1-201ENST00000246957 SHPRHQ149N8 1683 aa17.67■□□□□ 0.42
TRAP1-201ENST00000246957 ARHGEF10O15013 1369 aa17.67■□□□□ 0.42
TRAP1-201ENST00000246957 FAM9BQ8IZU0 186 aa17.66■□□□□ 0.42
TRAP1-201ENST00000246957 EP400Q96L91 3159 aa17.65■□□□□ 0.42
TRAP1-201ENST00000246957 COL22A1Q8NFW1 1626 aaPredicted RBP17.65■□□□□ 0.42
TRAP1-201ENST00000246957 LRP6O75581 1613 aa17.64■□□□□ 0.41
TRAP1-201ENST00000246957 COL18A1P39060 1754 aa17.64■□□□□ 0.41
TRAP1-201ENST00000246957 AMPHP49418 695 aa17.64■□□□□ 0.41
TRAP1-201ENST00000246957 COL3A1P02461 1466 aaPredicted RBP17.63■□□□□ 0.41
TRAP1-201ENST00000246957 BRD4O60885 1362 aaPredicted RBP17.63■□□□□ 0.41
TRAP1-201ENST00000246957 ARHGEF25Q86VW2 580 aa17.63■□□□□ 0.41
TRAP1-201ENST00000246957 YTHDC1Q96MU7 727 aaKnown RBP17.63■□□□□ 0.41
TRAP1-201ENST00000246957 FAM83GA6ND36 823 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms